mRNA_D-mesarthrocarpus_Contig9353.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9353.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9353.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9353.1.1 vs. uniprot
Match: D7FSH0_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSH0_ECTSI)

HSP 1 Score: 341 bits (874), Expect = 6.750e-109
Identity = 182/246 (73.98%), Postives = 205/246 (83.33%), Query Frame = 1
Query:    7 GNRPMDEVAQEWGLDVKLTQNLREEGIEHFFPIQVRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVILPSRDLAMQVHQVFRRVARGTGLRVGVAIGQTDFLKEQLSLVGRAALAGNPVAAAKACSLRVTDVLASQGSSLAP-----GTN---------GVLQGGTSEVDIVVATPGRLLDHLAHTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVLGASYR 702
            G RPM+EVA+EWGLD +LT+ LR EG++HFFPIQVRVVPDIVATERHSHVQSRDICVSAPTGSGKTLV+VLGVLQAL+RRRVVRLRALV+LPSRDLAMQVH VF++ ARGTGLRVG+AIGQT+FL+EQL+LVG  ALAGNP A A+A  LR       QG ++ P     G+N         G   GG+SEVDIVVATPGRLLDHL  TPGFTLQHLRYL+IDEADRLLNQSYQGWVGKV+ A+YR
Sbjct:  170 GPRPMEEVAEEWGLDPRLTEILRREGVKHFFPIQVRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRVVRLRALVLLPSRDLAMQVHSVFKKYARGTGLRVGLAIGQTNFLEEQLALVGPVALAGNPTATARASFLRA------QGRAIRPNPTMGGSNLDSGGWSGTGAPAGGSSEVDIVVATPGRLLDHLTQTPGFTLQHLRYLIIDEADRLLNQSYQGWVGKVIKAAYR 409          
BLAST of mRNA_D-mesarthrocarpus_Contig9353.1.1 vs. uniprot
Match: A0A835YS10_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS10_9STRA)

HSP 1 Score: 285 bits (729), Expect = 2.090e-88
Identity = 156/243 (64.20%), Postives = 185/243 (76.13%), Query Frame = 1
Query:   10 NRPMDEVAQEWGLDVKLTQNLREEGIEHFFPIQVRVVP----------DIVATERHSHVQSRDICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVILPSRDLAMQVHQVFRRVARGTGLRVGVAIGQTDFLKEQLSLVGRAALAGNPVAAAKA-CSLRVTDVLASQGSSLAPGTNGVLQ-GGTSEVDIVVATPGRLLDHLAHTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVLGASYR 702
            +RP++EVA+EWGLD +L + LR +G+ HFFPIQV VVP          DI+AT RHSHVQ+RD+CV APTGSGKTLVYVLGV+QAL+ RRV RLRAL +LPSRDLA QVH VF     GTGLRVG+AIGQ++ L EQLSLVG  AL+ +PVAAA+A    +   + A    + A G +  +  GG SEVDI+VATPGRLLDHL  TPGFTLQHL YLV+DEADRLLNQSYQ WVG+VL A+YR
Sbjct:   31 SRPVEEVAEEWGLDPRLRRTLRTQGVTHFFPIQVSVVPNITAMVSVVPDIMATARHSHVQARDVCVGAPTGSGKTLVYVLGVVQALLPRRVRRLRALALLPSRDLATQVHGVFTTYCTGTGLRVGLAIGQSNLLDEQLSLVGTTALSNSPVAAARAWVGGKSGGLRAPPAGAFARGMSAAVPLGGVSEVDILVATPGRLLDHLEQTPGFTLQHLMYLVVDEADRLLNQSYQDWVGRVLEAAYR 273          
BLAST of mRNA_D-mesarthrocarpus_Contig9353.1.1 vs. uniprot
Match: B7G364_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G364_PHATC)

HSP 1 Score: 209 bits (533), Expect = 4.560e-62
Identity = 105/226 (46.46%), Postives = 155/226 (68.58%), Query Frame = 1
Query:   13 RPMDEVAQEWGLDVKLTQNLREEGIEHFFPIQVRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVILPSRDLAMQVHQVFRRVARGTGLRVGVAIGQTDFLKEQLSLVGRAALA-GNPVAAAKACSLRVTDVLASQGSSLAPGTNGVLQGGTSEVDIVVATPGRLLDHLAHTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVL 687
            +P+D+ A  W +   LT NL+ +G  +FFPIQ   +PD++A+ERH+++Q+RD+C++APTGSGKTL YVL VL +L  R++ RLRALV+LPSRDLA QV +VF+    G+ L+VG+AIGQ+DF+ EQ++++   A   GN             D+   +                S +D++V TPGRL+DHL +TPGF+L+HLR+L++DEADRLL+Q+Y  W+G+V+
Sbjct:    4 QPIDQAATAWKIAPFLTNNLKRDGFANFFPIQALAIPDVIASERHAYIQARDVCITAPTGSGKTLAYVLPVLNSLANRKIRRLRALVVLPSRDLANQVFKVFKSFMEGSDLKVGLAIGQSDFVAEQMAILALQAFEDGND-----------HDLPEKRDPQ-------------STIDVLVCTPGRLVDHLDNTPGFSLEHLRFLIVDEADRLLSQTYHNWIGRVI 205          
BLAST of mRNA_D-mesarthrocarpus_Contig9353.1.1 vs. uniprot
Match: A0A7S3V688_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V688_9STRA)

HSP 1 Score: 212 bits (540), Expect = 9.860e-61
Identity = 119/249 (47.79%), Postives = 158/249 (63.45%), Query Frame = 1
Query:   25 EVAQEWGLDVKLTQNLREEGIEHFFPIQVRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVILPSRDLAMQVHQVFRRVARGTGLRVGVAIGQTDFLKEQLSLVGRAALAGNPVAAAKACSLRVTDVLASQGSSL----APG-----------TNGVLQ----------GGTSEVDIVVATPGRLLDHLAHTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVLGAS 696
            E A  W L   L  NL E+  ++FFPIQ  V+PD++A+ERH+H+++RDICV+APTGSGKTL +VL VL +L  RR+ RLRALV+LPSRDLA QV +VF+R ++G+ L +G+AIGQTDF  EQ SL+    + G        C   +        +      APG            +G L+          GG S VD++V TPGRL+DHL  TPGFTLQHLR+L+ DEADRL+NQ YQ W+ +V+ A+
Sbjct:  176 EAANLWKLAPFLINNLEEDEYDNFFPIQALVIPDVIASERHAHIRNRDICVAAPTGSGKTLSFVLPVLNSLANRRIKRLRALVVLPSRDLAAQVFKVFQRYSKGSDLSIGLAIGQTDFEAEQSSLIFEKKMIGFQPREEYRCQYALKPFSVKNATKAYSFDAPGDKSDVSLGGCWAHGDLKDFPDLCDTPIGGKSAVDVLVCTPGRLIDHLDKTPGFTLQHLRFLIADEADRLVNQGYQDWIRRVVEAA 424          
BLAST of mRNA_D-mesarthrocarpus_Contig9353.1.1 vs. uniprot
Match: A0A1E7FSJ3_9STRA (DEAD-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FSJ3_9STRA)

HSP 1 Score: 207 bits (528), Expect = 3.450e-60
Identity = 117/227 (51.54%), Postives = 146/227 (64.32%), Query Frame = 1
Query:   16 PMDEVAQEWGLDVKLTQNLREEGIEHFFPIQVRVVPDIVATERH-SHVQSRDICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVILPSRDLAMQVHQVFRRVARGT--GLRVGVAIGQTDFLKEQLSLVGRAALAGNPVAAAKACSLRVTDVLASQGSSLAPGTNGVLQGGTSEVDIVVATPGRLLDHLAHTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVL 687
            P+ E A+ WG+   L +NL+  G EHFFPIQ   +PD +  ERH + ++ RD+C +APTGSGKTL +VL VL AL  RRV RLRALVILPSRDLA QV+ VF    +G+   LR+G+AIGQT+F  EQ  L+                       L     S A     +  GG S VD++V TPGRL+DHL +TPGFTLQHLR+LVIDEADRLL+QSY GW+ +VL
Sbjct:    5 PIAEAARRWGMAEFLVRNLQSNGHEHFFPIQALTIPDAIIAERHMTSLRIRDVCCAAPTGSGKTLAFVLPVLNALASRRVRRLRALVILPSRDLAQQVYGVFDAYRKGSRNDLRIGLAIGQTEFRAEQKKLI-----------------------LGDDADSGADNKRKIPAGGISAVDVLVCTPGRLVDHLDNTPGFTLQHLRWLVIDEADRLLSQSYHGWIQRVL 208          
BLAST of mRNA_D-mesarthrocarpus_Contig9353.1.1 vs. uniprot
Match: A0A448ZLR2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZLR2_9STRA)

HSP 1 Score: 202 bits (514), Expect = 9.290e-57
Identity = 122/249 (49.00%), Postives = 155/249 (62.25%), Query Frame = 1
Query:   16 PMDEVAQEWGLDVKLTQNLREEGIEHFFPIQVRVVPDIVATERHS-HVQSRDICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVILPSRDLAMQVHQVFRRVARGT--GLRVGVAIGQTDFLKEQLSLV----------------------GRAALAGNPVAAAKACSLRVTDVLASQGSSLAPGTNGVLQGGTSEVDIVVATPGRLLDHLAHTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVL 687
            P+ E A+ WG+   L +NL   G EHFFPIQ  V+PD++  ERH   ++ RD+C +APTGSGKTL +VL VL AL  RRV RLRALVILPSRDLA QV++VF   ++G+   LR+G+AIGQTDF  EQ  L+                      G   LA + +         + D      S+ A     +  GG S VD++V TPGRL+DHL +TPGFTLQHLR+LVIDEADRLL+QSY GW+ +VL
Sbjct:  184 PIVEAARRWGMADFLVRNLVSNGHEHFFPIQALVIPDVIVAERHMMSLRVRDVCCAAPTGSGKTLAFVLPVLNALAARRVRRLRALVILPSRDLAQQVYEVFDAYSKGSKNDLRIGLAIGQTDFKAEQKKLIFGDSDENEDGNNWTRLQNSLDPGNLELALDAMREQLENDNDIGDETKDWKSNNAKSK--IPAGGISAVDVLVCTPGRLVDHLDNTPGFTLQHLRWLVIDEADRLLSQSYHGWIQRVL 430          
BLAST of mRNA_D-mesarthrocarpus_Contig9353.1.1 vs. uniprot
Match: A0A7S4EEM3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EEM3_9STRA)

HSP 1 Score: 199 bits (507), Expect = 5.460e-56
Identity = 121/247 (48.99%), Postives = 158/247 (63.97%), Query Frame = 1
Query:   16 PMDEVAQEWGLDVKLTQNLREEGIEHFFPIQVRVVPDIVATERH-SHVQSRDICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVILPSRDLAMQVHQVFRRVARGT--GLRVGVAIGQTDFLKEQLSLV---------GRAALA-------GNPVAAAKACSLRVTDVLASQGSSLAPGTNG----VLQGGTSEVDIVVATPGRLLDHLAHTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVL 687
            P+ E A+ WG+   L +NL   G +HFFPIQ  V+PD++  ERH + ++ RDIC +APTGSGKTL +VL VL AL  R+V RLRALVILPSRDLA QV++VF    RG+   L++G+AIGQTDF  EQ  L+         G++          GN   A  A   ++       G +    +N     +  GG S VD++V TPGRL+DHL +TPGFTLQHLR+LVIDEADRLL+QS+ GW+ +VL
Sbjct:  122 PIVEAARRWGMADFLVRNLISNGHKHFFPIQALVIPDVIVAERHMTSLRVRDICCAAPTGSGKTLAFVLPVLNALAARKVRRLRALVILPSRDLAQQVYEVFDAYKRGSKNDLQIGLAIGQTDFQAEQKRLIFGDDKENVNGKSWTQLRNSLDPGNINLALDAMKEQLRSDKGINGKTKNLDSNNRTPRIPAGGISAVDVLVCTPGRLVDHLDNTPGFTLQHLRWLVIDEADRLLSQSFHGWIQRVL 368          
BLAST of mRNA_D-mesarthrocarpus_Contig9353.1.1 vs. uniprot
Match: A0A1Y1YIE0_9FUNG (DEAD-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YIE0_9FUNG)

HSP 1 Score: 189 bits (480), Expect = 3.780e-53
Identity = 107/230 (46.52%), Postives = 139/230 (60.43%), Query Frame = 1
Query:   13 RPMDEVAQEWGLDVKLTQNLREEGIEHFFPIQVRVVPDIVATERHS--HVQSRDICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVILPSRDLAMQVHQVFRRVARGTGLRVGVAIGQTDFLKEQLSLVGRAALAGNPVAAAKACSLRVTDVLASQGSSLAPGTNGVLQGGTSEVDIVVATPGRLLDHLAHTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVLGAS 696
            RP+D+      L  ++    ++  IE FF +Q  V+P ++A++  S  +  S D+CVSAPTGSGKTL YV+ +++ L  R V RLRAL+ILP+RDL +QV   F    +GT L++GV  GQT F +EQ  +VG                                G + VLQGG S VDI++ATPGRL+DHL  TP FTLQHLRYLVIDEADRLLNQSYQ W+  VL A+
Sbjct:   39 RPVDDPKL--NLSSQILSRCKDNSIEEFFAVQTAVLPALLASKSSSLNYTFSGDLCVSAPTGSGKTLAYVIPIVETLSTRVVTRLRALIILPTRDLVVQVKDTFDAFCKGTNLKIGVITGQTSFAQEQSQIVG--------------------------------GGSQVLQGGASNVDILIATPGRLIDHLTSTPNFTLQHLRYLVIDEADRLLNQSYQDWLSNVLQAA 234          
BLAST of mRNA_D-mesarthrocarpus_Contig9353.1.1 vs. uniprot
Match: A0A2D4BV54_PYTIN (DEAD/DEAH box RNA helicase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BV54_PYTIN)

HSP 1 Score: 187 bits (476), Expect = 2.570e-52
Identity = 102/224 (45.54%), Postives = 141/224 (62.95%), Query Frame = 1
Query:   28 VAQEWGLDVKLTQNLREEGIEHFFPIQVRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVILPSRDLAMQVHQVFRRVARGTGLRVGVAIGQTDFLKEQLSLVGRAALAGNPVAAAKACSLRVTDVLASQGSSLAPGTNGVLQGGTSEVDIVVATPGRLLDHLAHTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVLGASY 699
            +A +W L  ++   L    I  FFP+Q   +P ++     ++ +  DIC++APTGSGKTLVY+L ++Q L+ R V RLRAL++LPSRDLA+QVHQ+  +    T LR G+AIGQ++F  EQ +LVG      +                   G S     +  + GG S+VDI+VATPGRL+DHL  TPGFTLQHL++LV+DEADRLLNQSYQ W+ K+  + +
Sbjct:   29 LAAQWKLSPEVVGTLSRMKIRSFFPVQAVAIPKLLD---QTNDRITDICINAPTGSGKTLVYILPIVQRLLPRVVYRLRALIVLPSRDLAIQVHQIVSQFCESTPLRCGLAIGQSNFAAEQQTLVGSDGRQPHQ-----------------HGISRTTSKSMAVDGGDSKVDILVATPGRLVDHLEQTPGFTLQHLQFLVVDEADRLLNQSYQDWIAKIYASIF 232          
BLAST of mRNA_D-mesarthrocarpus_Contig9353.1.1 vs. uniprot
Match: A0A1X2IB12_9FUNG (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IB12_9FUNG)

HSP 1 Score: 186 bits (472), Expect = 3.310e-52
Identity = 103/222 (46.40%), Postives = 139/222 (62.61%), Query Frame = 1
Query:   43 GLDVKLTQNLREEGIEHFFPIQVRVVPDIVATERHSHVQSR----DICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVILPSRDLAMQVHQVFRRVARGTGLRVGVAIGQTDFLKEQLSLVGRAALAGNPVAAAKACSLRVTDVLASQGSSLAPGTNGVLQGGTSEVDIVVATPGRLLDHLAHTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVLGAS 696
            GL   L Q  +++G+  FF +Q++V+P  +   R +   +R    D+C+SAPTGSGKTL YVL ++  L +R V RLRALVILP+RDL +QV + F    +GT L+VG+A+GQ  F++EQ+SLVG+                                +N    GG S+VDI++ATPGRL+DHL  TP FTLQHLR+LVIDEAD+LLNQSYQ W+  +L AS
Sbjct:   80 GLSSSLIQRCQDQGLSSFFAVQMQVIPAFL--RRKALYDTRRAPGDLCISAPTGSGKTLAYVLPIVDILSKRIVTRLRALVILPTRDLVIQVKETFDAFVKGTDLKVGIALGQHSFIQEQISLVGK--------------------------------SNEKYNGGHSKVDILIATPGRLMDHLKDTPNFTLQHLRFLVIDEADKLLNQSYQDWLNHILHAS 267          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9353.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSH0_ECTSI6.750e-10973.98DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835YS10_9STRA2.090e-8864.20DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
B7G364_PHATC4.560e-6246.46Predicted protein (Fragment) n=1 Tax=Phaeodactylum... [more]
A0A7S3V688_9STRA9.860e-6147.79Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A1E7FSJ3_9STRA3.450e-6051.54DEAD-domain-containing protein n=1 Tax=Fragilariop... [more]
A0A448ZLR2_9STRA9.290e-5749.00Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S4EEM3_9STRA5.460e-5648.99Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A1Y1YIE0_9FUNG3.780e-5346.52DEAD-domain-containing protein n=1 Tax=Basidiobolu... [more]
A0A2D4BV54_PYTIN2.570e-5245.54DEAD/DEAH box RNA helicase, putative n=1 Tax=Pythi... [more]
A0A1X2IB12_9FUNG3.310e-5246.40p-loop containing nucleoside triphosphate hydrolas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9353contigD-mesarthrocarpus_Contig9353:18..2532 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FSH0
Preferred nameDBP6
PFAMsDEAD,Helicase_C
Model size702
Max annot lvl2759|Eukaryota
KEGG koko:K14807
Hectar predicted targeting categoryother localisation
GOsGO:0000460,GO:0000463,GO:0000466,GO:0000470,GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010467,GO:0010501,GO:0016070,GO:0016072,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017151,GO:0019899,GO:0022613,GO:0030684,GO:0030687,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042273,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070035,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360,GO:1990904
Exons5
Evalue4.05e-107
EggNOG OGsCOG0513@1|root,KOG0350@2759|Eukaryota
EC3.6.4.13
Descriptionhelicase activity
Cds size684
COG categoryL
BRITEko00000,ko01000,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9353.1.1prot_D-mesarthrocarpus_Contig9353.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9353 18..2514 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791089.165129-CDS-D-mesarthrocarpus_Contig9353:17..1821680791089.165129-CDS-D-mesarthrocarpus_Contig9353:17..182Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9353 18..182 -
1680791089.1831229-CDS-D-mesarthrocarpus_Contig9353:879..9951680791089.1831229-CDS-D-mesarthrocarpus_Contig9353:879..995Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9353 880..995 -
1680791089.1970687-CDS-D-mesarthrocarpus_Contig9353:1339..15291680791089.1970687-CDS-D-mesarthrocarpus_Contig9353:1339..1529Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9353 1340..1529 -
1680791089.2091208-CDS-D-mesarthrocarpus_Contig9353:2064..21871680791089.2091208-CDS-D-mesarthrocarpus_Contig9353:2064..2187Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9353 2065..2187 -
1680791089.2196138-CDS-D-mesarthrocarpus_Contig9353:2424..25141680791089.2196138-CDS-D-mesarthrocarpus_Contig9353:2424..2514Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9353 2425..2514 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791089.2286978-UTR-D-mesarthrocarpus_Contig9353:2514..25321680791089.2286978-UTR-D-mesarthrocarpus_Contig9353:2514..2532Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9353 2515..2532 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9353.1.1

>prot_D-mesarthrocarpus_Contig9353.1.1 ID=prot_D-mesarthrocarpus_Contig9353.1.1|Name=mRNA_D-mesarthrocarpus_Contig9353.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=228bp
MDEVAQEWGLDVKLTQNLREEGIEHFFPIQVRVVPDIVATERHSHVQSRD
ICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVILPSRDLAMQVHQVF
RRVARGTGLRVGVAIGQTDFLKEQLSLVGRAALAGNPVAAAKACSLRVTD
VLASQGSSLAPGTNGVLQGGTSEVDIVVATPGRLLDHLAHTPGFTLQHLR
YLVIDEADRLLNQSYQGWVGKVLGASYR
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mRNA from alignment at D-mesarthrocarpus_Contig9353:18..2532-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9353.1.1 ID=mRNA_D-mesarthrocarpus_Contig9353.1.1|Name=mRNA_D-mesarthrocarpus_Contig9353.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2515bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9353:18..2532- (Discosporangium mesarthrocarpum MT17_79)
CGCGATGGCAACAGACCGATGGACGAGGTGGCCCAGGAGTGGGGCTTGGA CGTCAAGCTTACCCAAAACCTCCGAGAGGAAGGGATTGAACACTTCTTTC CCATTCAGGTGCGATATCAGCAATTAACAGAGTTCAACATAGCACAGGAC AGCCGCGTAAGCTACATTAACACGGCATCACTGATCGCTGCGGTCGCATC GTAGTGTCTCTTCGCCGTGTGAAGGTCCAGCGGCACGTTCATACCCATTT GGTGCTTGTCACAACCCCACAATAGTAGCGATCACTTTGGCAAGCATACT AGAACCCACAGCGACTCACCAGAGCTTCCCTTTGCCTCGACTCAGGTCCG CGTGGTGCCTGACATTGTGGCCACGGAACGCCACTCCCACGTGCAGAGCA GGGATATTTGTGTGTCAGCTCCCACGGGCAGCGGCAAAACGTTGGTGTAT GTTCTCGGGGTTCTCCAGGTATGCCCCAAGTACTCGGAGTACCAACCAAC CTGGCGTGTCCATGTGTTTTTGGTGGATTTGCCACGACAGATGCATGGGT TGAGTTCCACAATTGGTATAACCTTATTGTGGATTTCGTACAGGCAACGG ACGTTTGTGGAACTCAAGTACCGCTTTGCTGTGCGGCAGGTTTTCCGGGA TTTGCCAAGACAGGTGCATGGGTCAGTTATTACCGCTAGCGGTAATGTGA TGCATCTACAGTTGCTTGAGACTCACCAACCCTATTCCTGTGGCTGTCCA GGGCGATAACTCTTGTGGGGCACTCTTTCCACTGCCAAGTAACCCGTTTG AAGGTTTCCTTATTGAATTGGTCGAACACAAGCACCTCACCACAAGCATC GTGCTGAGCCGTGAAAACCTCACACTTCTTGTTTTTGTCGGGTTGATGCA CAGATGGTGGAGCAGGAACACCCCCAGCGGTGGCAAGAGATGTTGTCCAA AAATATCCTCCCAGAACTCATCCCTCTCACCCCCTCCCACCGCCACTTGG CAGGCTCTCATGCGCAGGAGGGTGGTGCGGCTCCGGGCCTTGGTCATCCT GCCCTCACGAGACCTGGCGATGCAGGTGCACCAGGTCTTCCGTCGGGTCG CCCGTGGGACAGGCCTGAGGGTGGGGGTTGCCATTGGGCAGACCGATTTT CTCAAGGAGCAGCTGTCCTTGGTCGGGAGGGCTGCTCTCGCAGGTTCGGC GTTTGCGCTGATTCAGGGGGGGGCGTGCACCCAACCACCTGGTTGCAGAG GTGGCCAATGGCTGAAGGCCTTTCCAATTTTCTGCCGTCCTGGCAGCGCA TTTTTTGTTGTCCTGGTAGCGCTGCACCACTACTAGTTCTAGTTTTTTTT TGTAGCTGTGGGAGCTCCTGTGCCAATGGCATGACACGCCGCTCTCTCTG TTAGTTTCAAGCCCTAAGGTAGTAATTCTAATTGCTCTAAACGAACCATA CCAGTTTGCGGGGGAATGCAACAAAGAATAGGCCCCGCGGTCGCCTGGCC CTGAAACCTTGTACATAAACTCTGCCCTGTTCGTCAGGAAACCCTGTGGC AGCTGCGAAGGCCTGTTCCCTTAGAGTTACAGATGTCCTGGCTAGTCAGG GCTCCTCCCTGGCTCCAGGTACCAACGGTGTGTTGCAGGGAGGCACCAGT GAGGTGAACACTGTTTCCAGGACGAAATCAGCTCACCCCCTCTCCTAAAG CCCCACGCTTCTGCACTCTCTCGAGTCTTGAGAGGGTCTCCTTCCTTTCT TTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCGATCT ATCTGGTGGTGTTCCTGGGGCATGGTTGAGGGAAGCAAATTCAGGGTCAC TCACGGTTGTTGCTAAGAATGCTGGACTCCTGTGGCCATGACAAGGCCGC TGCCCAGACGTGCAGAATGCATAGGAAGGGTTTTGGCAACGCGGACTCAC ATGCCGCCAGGCTTGCTTTGCACTGTGCTAACCCTAACCCTAACCCTAAC CCTAACCCTAACCCTAAGATACCTGAGCATGGCAAGAATCTTTAAAGTAC TTAGGAGTGCTTCGAGAGGGTCCACCCCCTCGCTCGCTGTCAGCCTGTCA GCAGGTCCTTCCTTCTCTTCCTTCTCTTCCTTCTCTTCCTTCTCTTCCTT GCACGCAGCACCGCGCTGTGCTTGATTTTCGATCTTCCCAGGGCACAGGA GACAGACAGACAAACCCTTTCACCCCCTGTCATCCTCTCGCCCTGTCTCC TCGGCTGGGGGCAGGGGGCGGTGGCCATCTGCTCAATCATGCAAGCATGA ATCCATGTGGCTCCTCCCATATCAATAATAGCTTCGTGTGCACACCCCAG GTGGACATTGTGGTAGCGACGCCAGGGAGGCTCTTGGACCACCTGGCCCA CACCCCCGGATTCACCCTTCAGCACCTGCGATACCTCGTCATTGACGAGG CTGATCGTCTCCTGAACCAGAGTTACCAGGGCTGGGTTGGAAAGGTGCTG GGCGCATCCTACAGG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9353:18..2532-

>mRNA_D-mesarthrocarpus_Contig9353.1.1 ID=mRNA_D-mesarthrocarpus_Contig9353.1.1|Name=mRNA_D-mesarthrocarpus_Contig9353.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=684bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9353:18..2532- (Discosporangium mesarthrocarpum MT17_79)
ATGGACGAGGTGGCCCAGGAGTGGGGCTTGGACGTCAAGCTTACCCAAAA
CCTCCGAGAGGAAGGGATTGAACACTTCTTTCCCATTCAGGTCCGCGTGG
TGCCTGACATTGTGGCCACGGAACGCCACTCCCACGTGCAGAGCAGGGAT
ATTTGTGTGTCAGCTCCCACGGGCAGCGGCAAAACGTTGGTGTATGTTCT
CGGGGTTCTCCAGGCTCTCATGCGCAGGAGGGTGGTGCGGCTCCGGGCCT
TGGTCATCCTGCCCTCACGAGACCTGGCGATGCAGGTGCACCAGGTCTTC
CGTCGGGTCGCCCGTGGGACAGGCCTGAGGGTGGGGGTTGCCATTGGGCA
GACCGATTTTCTCAAGGAGCAGCTGTCCTTGGTCGGGAGGGCTGCTCTCG
CAGGAAACCCTGTGGCAGCTGCGAAGGCCTGTTCCCTTAGAGTTACAGAT
GTCCTGGCTAGTCAGGGCTCCTCCCTGGCTCCAGGTACCAACGGTGTGTT
GCAGGGAGGCACCAGTGAGGTGGACATTGTGGTAGCGACGCCAGGGAGGC
TCTTGGACCACCTGGCCCACACCCCCGGATTCACCCTTCAGCACCTGCGA
TACCTCGTCATTGACGAGGCTGATCGTCTCCTGAACCAGAGTTACCAGGG
CTGGGTTGGAAAGGTGCTGGGCGCATCCTACAGG
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