mRNA_D-mesarthrocarpus_Contig9353.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9353.1.1 vs. uniprot
Match: D7FSH0_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSH0_ECTSI) HSP 1 Score: 341 bits (874), Expect = 6.750e-109 Identity = 182/246 (73.98%), Postives = 205/246 (83.33%), Query Frame = 1
Query: 7 GNRPMDEVAQEWGLDVKLTQNLREEGIEHFFPIQVRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVILPSRDLAMQVHQVFRRVARGTGLRVGVAIGQTDFLKEQLSLVGRAALAGNPVAAAKACSLRVTDVLASQGSSLAP-----GTN---------GVLQGGTSEVDIVVATPGRLLDHLAHTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVLGASYR 702
G RPM+EVA+EWGLD +LT+ LR EG++HFFPIQVRVVPDIVATERHSHVQSRDICVSAPTGSGKTLV+VLGVLQAL+RRRVVRLRALV+LPSRDLAMQVH VF++ ARGTGLRVG+AIGQT+FL+EQL+LVG ALAGNP A A+A LR QG ++ P G+N G GG+SEVDIVVATPGRLLDHL TPGFTLQHLRYL+IDEADRLLNQSYQGWVGKV+ A+YR
Sbjct: 170 GPRPMEEVAEEWGLDPRLTEILRREGVKHFFPIQVRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVFVLGVLQALIRRRVVRLRALVLLPSRDLAMQVHSVFKKYARGTGLRVGLAIGQTNFLEEQLALVGPVALAGNPTATARASFLRA------QGRAIRPNPTMGGSNLDSGGWSGTGAPAGGSSEVDIVVATPGRLLDHLTQTPGFTLQHLRYLIIDEADRLLNQSYQGWVGKVIKAAYR 409
BLAST of mRNA_D-mesarthrocarpus_Contig9353.1.1 vs. uniprot
Match: A0A835YS10_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS10_9STRA) HSP 1 Score: 285 bits (729), Expect = 2.090e-88 Identity = 156/243 (64.20%), Postives = 185/243 (76.13%), Query Frame = 1
Query: 10 NRPMDEVAQEWGLDVKLTQNLREEGIEHFFPIQVRVVP----------DIVATERHSHVQSRDICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVILPSRDLAMQVHQVFRRVARGTGLRVGVAIGQTDFLKEQLSLVGRAALAGNPVAAAKA-CSLRVTDVLASQGSSLAPGTNGVLQ-GGTSEVDIVVATPGRLLDHLAHTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVLGASYR 702
+RP++EVA+EWGLD +L + LR +G+ HFFPIQV VVP DI+AT RHSHVQ+RD+CV APTGSGKTLVYVLGV+QAL+ RRV RLRAL +LPSRDLA QVH VF GTGLRVG+AIGQ++ L EQLSLVG AL+ +PVAAA+A + + A + A G + + GG SEVDI+VATPGRLLDHL TPGFTLQHL YLV+DEADRLLNQSYQ WVG+VL A+YR
Sbjct: 31 SRPVEEVAEEWGLDPRLRRTLRTQGVTHFFPIQVSVVPNITAMVSVVPDIMATARHSHVQARDVCVGAPTGSGKTLVYVLGVVQALLPRRVRRLRALALLPSRDLATQVHGVFTTYCTGTGLRVGLAIGQSNLLDEQLSLVGTTALSNSPVAAARAWVGGKSGGLRAPPAGAFARGMSAAVPLGGVSEVDILVATPGRLLDHLEQTPGFTLQHLMYLVVDEADRLLNQSYQDWVGRVLEAAYR 273
BLAST of mRNA_D-mesarthrocarpus_Contig9353.1.1 vs. uniprot
Match: B7G364_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G364_PHATC) HSP 1 Score: 209 bits (533), Expect = 4.560e-62 Identity = 105/226 (46.46%), Postives = 155/226 (68.58%), Query Frame = 1
Query: 13 RPMDEVAQEWGLDVKLTQNLREEGIEHFFPIQVRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVILPSRDLAMQVHQVFRRVARGTGLRVGVAIGQTDFLKEQLSLVGRAALA-GNPVAAAKACSLRVTDVLASQGSSLAPGTNGVLQGGTSEVDIVVATPGRLLDHLAHTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVL 687
+P+D+ A W + LT NL+ +G +FFPIQ +PD++A+ERH+++Q+RD+C++APTGSGKTL YVL VL +L R++ RLRALV+LPSRDLA QV +VF+ G+ L+VG+AIGQ+DF+ EQ++++ A GN D+ + S +D++V TPGRL+DHL +TPGF+L+HLR+L++DEADRLL+Q+Y W+G+V+
Sbjct: 4 QPIDQAATAWKIAPFLTNNLKRDGFANFFPIQALAIPDVIASERHAYIQARDVCITAPTGSGKTLAYVLPVLNSLANRKIRRLRALVVLPSRDLANQVFKVFKSFMEGSDLKVGLAIGQSDFVAEQMAILALQAFEDGND-----------HDLPEKRDPQ-------------STIDVLVCTPGRLVDHLDNTPGFSLEHLRFLIVDEADRLLSQTYHNWIGRVI 205
BLAST of mRNA_D-mesarthrocarpus_Contig9353.1.1 vs. uniprot
Match: A0A7S3V688_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V688_9STRA) HSP 1 Score: 212 bits (540), Expect = 9.860e-61 Identity = 119/249 (47.79%), Postives = 158/249 (63.45%), Query Frame = 1
Query: 25 EVAQEWGLDVKLTQNLREEGIEHFFPIQVRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVILPSRDLAMQVHQVFRRVARGTGLRVGVAIGQTDFLKEQLSLVGRAALAGNPVAAAKACSLRVTDVLASQGSSL----APG-----------TNGVLQ----------GGTSEVDIVVATPGRLLDHLAHTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVLGAS 696
E A W L L NL E+ ++FFPIQ V+PD++A+ERH+H+++RDICV+APTGSGKTL +VL VL +L RR+ RLRALV+LPSRDLA QV +VF+R ++G+ L +G+AIGQTDF EQ SL+ + G C + + APG +G L+ GG S VD++V TPGRL+DHL TPGFTLQHLR+L+ DEADRL+NQ YQ W+ +V+ A+
Sbjct: 176 EAANLWKLAPFLINNLEEDEYDNFFPIQALVIPDVIASERHAHIRNRDICVAAPTGSGKTLSFVLPVLNSLANRRIKRLRALVVLPSRDLAAQVFKVFQRYSKGSDLSIGLAIGQTDFEAEQSSLIFEKKMIGFQPREEYRCQYALKPFSVKNATKAYSFDAPGDKSDVSLGGCWAHGDLKDFPDLCDTPIGGKSAVDVLVCTPGRLIDHLDKTPGFTLQHLRFLIADEADRLVNQGYQDWIRRVVEAA 424
BLAST of mRNA_D-mesarthrocarpus_Contig9353.1.1 vs. uniprot
Match: A0A1E7FSJ3_9STRA (DEAD-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FSJ3_9STRA) HSP 1 Score: 207 bits (528), Expect = 3.450e-60 Identity = 117/227 (51.54%), Postives = 146/227 (64.32%), Query Frame = 1
Query: 16 PMDEVAQEWGLDVKLTQNLREEGIEHFFPIQVRVVPDIVATERH-SHVQSRDICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVILPSRDLAMQVHQVFRRVARGT--GLRVGVAIGQTDFLKEQLSLVGRAALAGNPVAAAKACSLRVTDVLASQGSSLAPGTNGVLQGGTSEVDIVVATPGRLLDHLAHTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVL 687
P+ E A+ WG+ L +NL+ G EHFFPIQ +PD + ERH + ++ RD+C +APTGSGKTL +VL VL AL RRV RLRALVILPSRDLA QV+ VF +G+ LR+G+AIGQT+F EQ L+ L S A + GG S VD++V TPGRL+DHL +TPGFTLQHLR+LVIDEADRLL+QSY GW+ +VL
Sbjct: 5 PIAEAARRWGMAEFLVRNLQSNGHEHFFPIQALTIPDAIIAERHMTSLRIRDVCCAAPTGSGKTLAFVLPVLNALASRRVRRLRALVILPSRDLAQQVYGVFDAYRKGSRNDLRIGLAIGQTEFRAEQKKLI-----------------------LGDDADSGADNKRKIPAGGISAVDVLVCTPGRLVDHLDNTPGFTLQHLRWLVIDEADRLLSQSYHGWIQRVL 208
BLAST of mRNA_D-mesarthrocarpus_Contig9353.1.1 vs. uniprot
Match: A0A448ZLR2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZLR2_9STRA) HSP 1 Score: 202 bits (514), Expect = 9.290e-57 Identity = 122/249 (49.00%), Postives = 155/249 (62.25%), Query Frame = 1
Query: 16 PMDEVAQEWGLDVKLTQNLREEGIEHFFPIQVRVVPDIVATERHS-HVQSRDICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVILPSRDLAMQVHQVFRRVARGT--GLRVGVAIGQTDFLKEQLSLV----------------------GRAALAGNPVAAAKACSLRVTDVLASQGSSLAPGTNGVLQGGTSEVDIVVATPGRLLDHLAHTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVL 687
P+ E A+ WG+ L +NL G EHFFPIQ V+PD++ ERH ++ RD+C +APTGSGKTL +VL VL AL RRV RLRALVILPSRDLA QV++VF ++G+ LR+G+AIGQTDF EQ L+ G LA + + + D S+ A + GG S VD++V TPGRL+DHL +TPGFTLQHLR+LVIDEADRLL+QSY GW+ +VL
Sbjct: 184 PIVEAARRWGMADFLVRNLVSNGHEHFFPIQALVIPDVIVAERHMMSLRVRDVCCAAPTGSGKTLAFVLPVLNALAARRVRRLRALVILPSRDLAQQVYEVFDAYSKGSKNDLRIGLAIGQTDFKAEQKKLIFGDSDENEDGNNWTRLQNSLDPGNLELALDAMREQLENDNDIGDETKDWKSNNAKSK--IPAGGISAVDVLVCTPGRLVDHLDNTPGFTLQHLRWLVIDEADRLLSQSYHGWIQRVL 430
BLAST of mRNA_D-mesarthrocarpus_Contig9353.1.1 vs. uniprot
Match: A0A7S4EEM3_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EEM3_9STRA) HSP 1 Score: 199 bits (507), Expect = 5.460e-56 Identity = 121/247 (48.99%), Postives = 158/247 (63.97%), Query Frame = 1
Query: 16 PMDEVAQEWGLDVKLTQNLREEGIEHFFPIQVRVVPDIVATERH-SHVQSRDICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVILPSRDLAMQVHQVFRRVARGT--GLRVGVAIGQTDFLKEQLSLV---------GRAALA-------GNPVAAAKACSLRVTDVLASQGSSLAPGTNG----VLQGGTSEVDIVVATPGRLLDHLAHTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVL 687
P+ E A+ WG+ L +NL G +HFFPIQ V+PD++ ERH + ++ RDIC +APTGSGKTL +VL VL AL R+V RLRALVILPSRDLA QV++VF RG+ L++G+AIGQTDF EQ L+ G++ GN A A ++ G + +N + GG S VD++V TPGRL+DHL +TPGFTLQHLR+LVIDEADRLL+QS+ GW+ +VL
Sbjct: 122 PIVEAARRWGMADFLVRNLISNGHKHFFPIQALVIPDVIVAERHMTSLRVRDICCAAPTGSGKTLAFVLPVLNALAARKVRRLRALVILPSRDLAQQVYEVFDAYKRGSKNDLQIGLAIGQTDFQAEQKRLIFGDDKENVNGKSWTQLRNSLDPGNINLALDAMKEQLRSDKGINGKTKNLDSNNRTPRIPAGGISAVDVLVCTPGRLVDHLDNTPGFTLQHLRWLVIDEADRLLSQSFHGWIQRVL 368
BLAST of mRNA_D-mesarthrocarpus_Contig9353.1.1 vs. uniprot
Match: A0A1Y1YIE0_9FUNG (DEAD-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YIE0_9FUNG) HSP 1 Score: 189 bits (480), Expect = 3.780e-53 Identity = 107/230 (46.52%), Postives = 139/230 (60.43%), Query Frame = 1
Query: 13 RPMDEVAQEWGLDVKLTQNLREEGIEHFFPIQVRVVPDIVATERHS--HVQSRDICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVILPSRDLAMQVHQVFRRVARGTGLRVGVAIGQTDFLKEQLSLVGRAALAGNPVAAAKACSLRVTDVLASQGSSLAPGTNGVLQGGTSEVDIVVATPGRLLDHLAHTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVLGAS 696
RP+D+ L ++ ++ IE FF +Q V+P ++A++ S + S D+CVSAPTGSGKTL YV+ +++ L R V RLRAL+ILP+RDL +QV F +GT L++GV GQT F +EQ +VG G + VLQGG S VDI++ATPGRL+DHL TP FTLQHLRYLVIDEADRLLNQSYQ W+ VL A+
Sbjct: 39 RPVDDPKL--NLSSQILSRCKDNSIEEFFAVQTAVLPALLASKSSSLNYTFSGDLCVSAPTGSGKTLAYVIPIVETLSTRVVTRLRALIILPTRDLVVQVKDTFDAFCKGTNLKIGVITGQTSFAQEQSQIVG--------------------------------GGSQVLQGGASNVDILIATPGRLIDHLTSTPNFTLQHLRYLVIDEADRLLNQSYQDWLSNVLQAA 234
BLAST of mRNA_D-mesarthrocarpus_Contig9353.1.1 vs. uniprot
Match: A0A2D4BV54_PYTIN (DEAD/DEAH box RNA helicase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BV54_PYTIN) HSP 1 Score: 187 bits (476), Expect = 2.570e-52 Identity = 102/224 (45.54%), Postives = 141/224 (62.95%), Query Frame = 1
Query: 28 VAQEWGLDVKLTQNLREEGIEHFFPIQVRVVPDIVATERHSHVQSRDICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVILPSRDLAMQVHQVFRRVARGTGLRVGVAIGQTDFLKEQLSLVGRAALAGNPVAAAKACSLRVTDVLASQGSSLAPGTNGVLQGGTSEVDIVVATPGRLLDHLAHTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVLGASY 699
+A +W L ++ L I FFP+Q +P ++ ++ + DIC++APTGSGKTLVY+L ++Q L+ R V RLRAL++LPSRDLA+QVHQ+ + T LR G+AIGQ++F EQ +LVG + G S + + GG S+VDI+VATPGRL+DHL TPGFTLQHL++LV+DEADRLLNQSYQ W+ K+ + +
Sbjct: 29 LAAQWKLSPEVVGTLSRMKIRSFFPVQAVAIPKLLD---QTNDRITDICINAPTGSGKTLVYILPIVQRLLPRVVYRLRALIVLPSRDLAIQVHQIVSQFCESTPLRCGLAIGQSNFAAEQQTLVGSDGRQPHQ-----------------HGISRTTSKSMAVDGGDSKVDILVATPGRLVDHLEQTPGFTLQHLQFLVVDEADRLLNQSYQDWIAKIYASIF 232
BLAST of mRNA_D-mesarthrocarpus_Contig9353.1.1 vs. uniprot
Match: A0A1X2IB12_9FUNG (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IB12_9FUNG) HSP 1 Score: 186 bits (472), Expect = 3.310e-52 Identity = 103/222 (46.40%), Postives = 139/222 (62.61%), Query Frame = 1
Query: 43 GLDVKLTQNLREEGIEHFFPIQVRVVPDIVATERHSHVQSR----DICVSAPTGSGKTLVYVLGVLQALMRRRVVRLRALVILPSRDLAMQVHQVFRRVARGTGLRVGVAIGQTDFLKEQLSLVGRAALAGNPVAAAKACSLRVTDVLASQGSSLAPGTNGVLQGGTSEVDIVVATPGRLLDHLAHTPGFTLQHLRYLVIDEADRLLNQSYQGWVGKVLGAS 696
GL L Q +++G+ FF +Q++V+P + R + +R D+C+SAPTGSGKTL YVL ++ L +R V RLRALVILP+RDL +QV + F +GT L+VG+A+GQ F++EQ+SLVG+ +N GG S+VDI++ATPGRL+DHL TP FTLQHLR+LVIDEAD+LLNQSYQ W+ +L AS
Sbjct: 80 GLSSSLIQRCQDQGLSSFFAVQMQVIPAFL--RRKALYDTRRAPGDLCISAPTGSGKTLAYVLPIVDILSKRIVTRLRALVILPTRDLVIQVKETFDAFVKGTDLKVGIALGQHSFIQEQISLVGK--------------------------------SNEKYNGGHSKVDILIATPGRLMDHLKDTPNFTLQHLRFLVIDEADKLLNQSYQDWLNHILHAS 267 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9353.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9353.1.1 >prot_D-mesarthrocarpus_Contig9353.1.1 ID=prot_D-mesarthrocarpus_Contig9353.1.1|Name=mRNA_D-mesarthrocarpus_Contig9353.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=228bp MDEVAQEWGLDVKLTQNLREEGIEHFFPIQVRVVPDIVATERHSHVQSRDback to top mRNA from alignment at D-mesarthrocarpus_Contig9353:18..2532- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9353.1.1 ID=mRNA_D-mesarthrocarpus_Contig9353.1.1|Name=mRNA_D-mesarthrocarpus_Contig9353.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2515bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9353:18..2532- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9353:18..2532- >mRNA_D-mesarthrocarpus_Contig9353.1.1 ID=mRNA_D-mesarthrocarpus_Contig9353.1.1|Name=mRNA_D-mesarthrocarpus_Contig9353.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=684bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9353:18..2532- (Discosporangium mesarthrocarpum MT17_79)back to top |