mRNA_D-mesarthrocarpus_Contig9352.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9352.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9352.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9352.1.1 vs. uniprot
Match: D8LKW3_ECTSI (cGMP-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW3_ECTSI)

HSP 1 Score: 113 bits (282), Expect = 1.670e-27
Identity = 54/71 (76.06%), Postives = 63/71 (88.73%), Query Frame = 1
Query:    1 MNALLDTMEKEARAAGEWLMQEGEKGDAMYVIKSGRVEVFMNGELTREVGPGGAVGELALLYHTPRSASVK 213
            MN+L+DTMEK +  +GEWLMQEGE GDAMYVIK+G++EV++ G LTR VGPG AVGELALLYHTPRSASVK
Sbjct:  170 MNSLIDTMEKSSCRSGEWLMQEGEPGDAMYVIKTGKLEVYVGGTLTRHVGPGCAVGELALLYHTPRSASVK 240          
BLAST of mRNA_D-mesarthrocarpus_Contig9352.1.1 vs. uniprot
Match: A0A835YKT1_9STRA (cGMP-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKT1_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 9.040e-18
Identity = 40/68 (58.82%), Postives = 52/68 (76.47%), Query Frame = 1
Query:   10 LLDTMEKEARAAGEWLMQEGEKGDAMYVIKSGRVEVFMNGELTREVGPGGAVGELALLYHTPRSASVK 213
            LLD+ E  A AAGEWLM+EGE+GD MY++  G ++V + GE  R++G G AVGELAL+Y  PRSASV+
Sbjct:  186 LLDSFEMVACAAGEWLMKEGEEGDNMYIVAEGSLQVLVGGEKVRDIGRGDAVGELALIYSAPRSASVR 253          
BLAST of mRNA_D-mesarthrocarpus_Contig9352.1.1 vs. uniprot
Match: A0A7S2UWP0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWP0_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.600e-16
Identity = 39/73 (53.42%), Postives = 58/73 (79.45%), Query Frame = 1
Query:    1 MNALLDTMEKEARAAGEWLMQEGEKGDAMYVIKSGRVEVFMNGELTREVGPGGAVGELALLYHTPRSASVKVR 219
            M+ +LD++  E  AAGE+LM++GE+G+ MY+I+SG +EV ++ +L R +G G AVGELALL++ PRSASVK +
Sbjct:    2 MDLVLDSLRCEHLAAGEYLMRQGEEGNKMYIIQSGSLEVDIDNKLVRVIGAGDAVGELALLFNAPRSASVKAQ 74          
BLAST of mRNA_D-mesarthrocarpus_Contig9352.1.1 vs. uniprot
Match: A0A0S7JXQ5_9TELE (KAP1 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7JXQ5_9TELE)

HSP 1 Score: 72.4 bits (176), Expect = 1.350e-14
Identity = 33/67 (49.25%), Postives = 47/67 (70.15%), Query Frame = 1
Query:   10 LLDTMEKEARAAGEWLMQEGEKGDAMYVIKSGRVEVFMNGELTREVGPGGAVGELALLYHTPRSASV 210
            + D M      AGE ++Q+G++GD  YVI  G V+V++NGEL   +G GG+ GELAL+Y TPR+A+V
Sbjct:   58 IFDAMFPVTHIAGETVIQQGDEGDNFYVIDQGEVDVYVNGELVTNIGEGGSFGELALIYGTPRAATV 124          
BLAST of mRNA_D-mesarthrocarpus_Contig9352.1.1 vs. uniprot
Match: A0A087TNX1_STEMI (cAMP-dependent protein kinase regulatory subunit (Fragment) n=12 Tax=Entelegynae TaxID=74971 RepID=A0A087TNX1_STEMI)

HSP 1 Score: 75.9 bits (185), Expect = 1.740e-14
Identity = 34/70 (48.57%), Postives = 50/70 (71.43%), Query Frame = 1
Query:   10 LLDTMEKEARAAGEWLMQEGEKGDAMYVIKSGRVEVFMNGELTREVGPGGAVGELALLYHTPRSASVKVR 219
            + D M     +AGE ++Q+G++GD  YVI  G VEVF+NG+L   +G GG+ GELAL+Y TPR+A+V+ +
Sbjct:  148 IFDAMFPVVHSAGETIIQQGDQGDNFYVIDQGEVEVFVNGQLVTTIGEGGSFGELALIYGTPRAATVRAK 217          
BLAST of mRNA_D-mesarthrocarpus_Contig9352.1.1 vs. uniprot
Match: A0A0S7JYE7_9TELE (KAP1 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7JYE7_9TELE)

HSP 1 Score: 75.1 bits (183), Expect = 1.820e-14
Identity = 34/70 (48.57%), Postives = 49/70 (70.00%), Query Frame = 1
Query:   10 LLDTMEKEARAAGEWLMQEGEKGDAMYVIKSGRVEVFMNGELTREVGPGGAVGELALLYHTPRSASVKVR 219
            + D M      AGE ++Q+G++GD  YVI  G V+V++NGEL   +G GG+ GELAL+Y TPR+A+VK +
Sbjct:   58 IFDAMFPVTHIAGETVIQQGDEGDNFYVIDQGEVDVYVNGELVTNIGEGGSFGELALIYGTPRAATVKAK 127          
BLAST of mRNA_D-mesarthrocarpus_Contig9352.1.1 vs. uniprot
Match: UPI000EAA699D (cAMP-dependent protein kinase type I-beta regulatory subunit-like n=1 Tax=Pseudonaja textilis TaxID=8673 RepID=UPI000EAA699D)

HSP 1 Score: 73.2 bits (178), Expect = 1.930e-14
Identity = 34/70 (48.57%), Postives = 48/70 (68.57%), Query Frame = 1
Query:   10 LLDTMEKEARAAGEWLMQEGEKGDAMYVIKSGRVEVFMNGELTREVGPGGAVGELALLYHTPRSASVKVR 219
            + D M      AGE ++Q+G++GD  YVI  G V V++NGEL   +G GG+ GELAL+Y TPR+A+VK +
Sbjct:   93 IFDAMFPVTHIAGETVIQQGDEGDNFYVIDHGEVYVYVNGELVTSIGEGGSFGELALIYGTPRAATVKAK 162          
BLAST of mRNA_D-mesarthrocarpus_Contig9352.1.1 vs. uniprot
Match: H3DKT5_TETNG (Protein kinase, cAMP-dependent, regulatory, type I, beta n=4 Tax=Tetraodontidae TaxID=31031 RepID=H3DKT5_TETNG)

HSP 1 Score: 75.1 bits (183), Expect = 2.440e-14
Identity = 34/70 (48.57%), Postives = 49/70 (70.00%), Query Frame = 1
Query:   10 LLDTMEKEARAAGEWLMQEGEKGDAMYVIKSGRVEVFMNGELTREVGPGGAVGELALLYHTPRSASVKVR 219
            + D M      AGE ++Q+G++GD  YVI  G V+V++NGEL   +G GG+ GELAL+Y TPR+A+VK +
Sbjct:   91 IFDAMFPVTHIAGETVIQQGDEGDNFYVIDQGEVDVYVNGELVTNIGEGGSFGELALIYGTPRAATVKAK 160          
BLAST of mRNA_D-mesarthrocarpus_Contig9352.1.1 vs. uniprot
Match: UPI000528B8EC (cAMP-dependent protein kinase type I-beta regulatory subunit-like n=1 Tax=Eurypyga helias TaxID=54383 RepID=UPI000528B8EC)

HSP 1 Score: 72.8 bits (177), Expect = 2.560e-14
Identity = 33/70 (47.14%), Postives = 48/70 (68.57%), Query Frame = 1
Query:   10 LLDTMEKEARAAGEWLMQEGEKGDAMYVIKSGRVEVFMNGELTREVGPGGAVGELALLYHTPRSASVKVR 219
            + D M      AGE ++Q+G++GD  YVI  G V+V++NGE    +G GG+ GELAL+Y TPR+A+VK +
Sbjct:   29 IFDAMFPVTHIAGETVIQQGDEGDNFYVIDQGEVDVYVNGEWVTSIGEGGSFGELALIYGTPRAATVKAK 98          
BLAST of mRNA_D-mesarthrocarpus_Contig9352.1.1 vs. uniprot
Match: A0A397T6R8_9GLOM (cAMP-dependent protein kinase regulatory subunit n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397T6R8_9GLOM)

HSP 1 Score: 75.1 bits (183), Expect = 2.580e-14
Identity = 32/70 (45.71%), Postives = 54/70 (77.14%), Query Frame = 1
Query:   10 LLDTMEKEARAAGEWLMQEGEKGDAMYVIKSGRVEVFMNGELTREVGPGGAVGELALLYHTPRSASVKVR 219
            ++D M ++   A E+++++G++GD  YVI+ G  E+F+NG+L  EVG GG+ GELAL+Y+TPR+A+V+ +
Sbjct:   67 VVDAMSEKRVVANEFIIKQGDEGDYFYVIEHGLFEIFVNGQLVLEVGDGGSFGELALMYNTPRAATVRAK 136          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9352.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKW3_ECTSI1.670e-2776.06cGMP-dependent protein kinase n=1 Tax=Ectocarpus s... [more]
A0A835YKT1_9STRA9.040e-1858.82cGMP-dependent protein kinase n=1 Tax=Tribonema mi... [more]
A0A7S2UWP0_9STRA1.600e-1653.42Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A0S7JXQ5_9TELE1.350e-1449.25KAP1 (Fragment) n=1 Tax=Poeciliopsis prolifica Tax... [more]
A0A087TNX1_STEMI1.740e-1448.57cAMP-dependent protein kinase regulatory subunit (... [more]
A0A0S7JYE7_9TELE1.820e-1448.57KAP1 (Fragment) n=1 Tax=Poeciliopsis prolifica Tax... [more]
UPI000EAA699D1.930e-1448.57cAMP-dependent protein kinase type I-beta regulato... [more]
H3DKT5_TETNG2.440e-1448.57Protein kinase, cAMP-dependent, regulatory, type I... [more]
UPI000528B8EC2.560e-1447.14cAMP-dependent protein kinase type I-beta regulato... [more]
A0A397T6R8_9GLOM2.580e-1445.71cAMP-dependent protein kinase regulatory subunit n... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9352contigD-mesarthrocarpus_Contig9352:202..420 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LKW3
PFAMsPkinase,cNMP_binding
Model size219
Max annot lvl2759|Eukaryota
KEGG koko:K07376
KEGG Pathwayko04022,ko04270,ko04540,ko04611,ko04713,ko04714,ko04730,ko04740,ko04923,ko04970,map04022,map04270,map04540,map04611,map04713,map04714,map04730,map04740,map04923,map04970
KEGG ModuleM00694
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.73e-28
EggNOG OGsCOG0664@1|root,KOG0616@1|root,KOG0614@2759|Eukaryota,KOG0616@2759|Eukaryota
Ec32 ortholog descriptioncAMP-dependent protein kinase catalytic subunit (PKA)
Ec32 orthologEc-11_005800.2
EC2.7.11.12
DescriptioncAMP-dependent protein kinase activity
Cds size219
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000,ko01001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791089.1254704-CDS-D-mesarthrocarpus_Contig9352:201..4201680791089.1254704-CDS-D-mesarthrocarpus_Contig9352:201..420Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9352 202..420 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9352.1.1prot_D-mesarthrocarpus_Contig9352.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9352 202..420 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9352.1.1

>prot_D-mesarthrocarpus_Contig9352.1.1 ID=prot_D-mesarthrocarpus_Contig9352.1.1|Name=mRNA_D-mesarthrocarpus_Contig9352.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=73bp
MNALLDTMEKEARAAGEWLMQEGEKGDAMYVIKSGRVEVFMNGELTREVG
PGGAVGELALLYHTPRSASVKVR
back to top

mRNA from alignment at D-mesarthrocarpus_Contig9352:202..420+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9352.1.1 ID=mRNA_D-mesarthrocarpus_Contig9352.1.1|Name=mRNA_D-mesarthrocarpus_Contig9352.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=219bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9352:202..420+ (Discosporangium mesarthrocarpum MT17_79)
ATGAACGCTTTGCTGGACACCATGGAGAAAGAGGCACGGGCAGCGGGGGA GTGGCTCATGCAGGAGGGGGAGAAGGGGGATGCCATGTACGTGATCAAGT CTGGGAGGGTGGAGGTCTTCATGAATGGGGAGCTCACGAGGGAGGTTGGG CCAGGGGGGGCGGTGGGAGAGCTTGCTCTCCTTTATCACACCCCAAGGAG CGCAAGCGTGAAGGTCAGG
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9352:202..420+

>mRNA_D-mesarthrocarpus_Contig9352.1.1 ID=mRNA_D-mesarthrocarpus_Contig9352.1.1|Name=mRNA_D-mesarthrocarpus_Contig9352.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=219bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9352:202..420+ (Discosporangium mesarthrocarpum MT17_79)
ATGAACGCTTTGCTGGACACCATGGAGAAAGAGGCACGGGCAGCGGGGGA
GTGGCTCATGCAGGAGGGGGAGAAGGGGGATGCCATGTACGTGATCAAGT
CTGGGAGGGTGGAGGTCTTCATGAATGGGGAGCTCACGAGGGAGGTTGGG
CCAGGGGGGGCGGTGGGAGAGCTTGCTCTCCTTTATCACACCCCAAGGAG
CGCAAGCGTGAAGGTCAGG
back to top