mRNA_D-mesarthrocarpus_Contig9351.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9351.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig9351.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9351.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9351contigD-mesarthrocarpus_Contig9351:765..2161 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size912
Hectar predicted targeting categoryother localisation
Exons3
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-17_003730.1
Cds size834
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791089.021195-CDS-D-mesarthrocarpus_Contig9351:764..11121680791089.021195-CDS-D-mesarthrocarpus_Contig9351:764..1112Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9351 765..1112 -
1680791089.034862-CDS-D-mesarthrocarpus_Contig9351:1275..16231680791089.034862-CDS-D-mesarthrocarpus_Contig9351:1275..1623Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9351 1276..1623 -
1680791089.0504286-CDS-D-mesarthrocarpus_Contig9351:1945..20831680791089.0504286-CDS-D-mesarthrocarpus_Contig9351:1945..2083Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9351 1946..2083 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791089.0662675-UTR-D-mesarthrocarpus_Contig9351:2083..21611680791089.0662675-UTR-D-mesarthrocarpus_Contig9351:2083..2161Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9351 2084..2161 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9351.2.1prot_D-mesarthrocarpus_Contig9351.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9351 765..2083 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9351.2.1

>prot_D-mesarthrocarpus_Contig9351.2.1 ID=prot_D-mesarthrocarpus_Contig9351.2.1|Name=mRNA_D-mesarthrocarpus_Contig9351.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=278bp
MEMSTSDIDRRKRRMSEPLGRKSPHSPVLENNETQALRTNKKVESEASIK
VKKAHSTRRRRSHGTPNYSPYSPMVFDYNIHRRASAPPLPSKNFFGPSET
FEDSHAVSEQSPTLEQCLVLPPKLSGENSYSAGFDNQCSPATELILGGGS
FLTWEKPDAEPQEGRTPSKPAALTTVETEELALPATASTGGHAGPKPSPR
DILERSSTSYGKNLELYVLPSGGNGTVEGYGDESVSDPVAVDHDFTVLDA
THFGDLGGGRDSGWVLPYIRVDAQEVTV
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mRNA from alignment at D-mesarthrocarpus_Contig9351:765..2161-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9351.2.1 ID=mRNA_D-mesarthrocarpus_Contig9351.2.1|Name=mRNA_D-mesarthrocarpus_Contig9351.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1397bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9351:765..2161- (Discosporangium mesarthrocarpum MT17_79)
GTGCACACTGCTACCCTTGGTGTTTCCAGGGGAGGTGGGAGGGGGGGAGC
GTGACGAGGGCTGGCCATAAGATATAGGATGGAAATGAGCACGAGTGATA
TAGATCGGAGGAAGAGGCGGATGAGTGAACCTCTTGGTCGCAAGAGTCCT
CATTCGCCTGTGTTGGAGAACAATGAAACACAGGCTCTCCGGACGAACAA
GAAAGTTGAAAGCGAGGTGAGCCTCAAACTGGGTTCGTTTCGTTGAAGGA
GAAGGGGATATATGAGTACTGATTGAATAAAGGGTACTGTGTCAATGATT
CATCAGAAAATCTTTATAGTCAATCCACCTACAGGATCACATACCACATG
GTGCATATTTGCATGGTTGTCGCCGGAGTCATTATGGGTCACTGGGACGC
TTTCCTGCTATCGATGTCGATGATACCTACCTTATTCCTTGTGCTTGTGT
GAGTACCAACTGTATTGAAACATGAACCACAAATTCATCAGAATTGACGT
TTGAAGATTGACGTCCCAACTCCCGTTACCCACTTTAGGCGAGCATCAAG
GTGAAAAAGGCCCATAGTACAAGGAGGAGACGTTCACATGGGACTCCGAA
TTACTCCCCATACTCTCCTATGGTGTTCGACTACAACATCCATCGGCGAG
CGAGTGCTCCACCTCTACCAAGCAAGAACTTCTTTGGCCCATCAGAAACG
TTCGAGGATAGTCACGCTGTCTCCGAGCAAAGTCCGACTTTGGAACAGTG
CTTGGTTCTTCCTCCGAAATTAAGTGGCGAGAACTCTTACTCAGCTGGAT
TCGACAATCAGTGTTCACCTGCTACAGAATTGATCCTAGGTGGAGGCAGC
TTTCTTACCTGGGAAAAGCCGGATGCAGAGCCCCAGGTCAGCTTTCCCGT
ATTGATCTTTGCTGGCATGCCCCTGTGGTACTGCATGCGGTAATTTATGC
ATCCTCTTGCCGTGTAGATACTACTCCACTGTTAAGGTTTTGCTGACTGT
TTTGAACTTGCGTGGGACATGCCCCGCTGACTGACCCACGCCAACCCAGG
AGGGGAGGACGCCCAGCAAGCCAGCAGCTTTAACCACTGTGGAGACCGAG
GAACTCGCTTTGCCAGCAACAGCCTCTACCGGTGGGCACGCAGGCCCCAA
ACCTTCCCCTCGGGACATATTAGAGAGATCGAGTACTTCTTATGGGAAGA
ATCTAGAGCTGTACGTGCTACCCAGTGGTGGGAACGGGACTGTGGAAGGG
TATGGAGATGAGAGCGTTTCCGACCCTGTGGCTGTTGACCATGACTTCAC
CGTCCTCGATGCGACCCACTTTGGAGATTTGGGGGGGGGGAGGGACTCGG
GTTGGGTCTTGCCATACATCCGTGTTGATGCCCAAGAAGTCACTGTC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9351:765..2161-

>mRNA_D-mesarthrocarpus_Contig9351.2.1 ID=mRNA_D-mesarthrocarpus_Contig9351.2.1|Name=mRNA_D-mesarthrocarpus_Contig9351.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=834bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9351:765..2161- (Discosporangium mesarthrocarpum MT17_79)
ATGGAAATGAGCACGAGTGATATAGATCGGAGGAAGAGGCGGATGAGTGA
ACCTCTTGGTCGCAAGAGTCCTCATTCGCCTGTGTTGGAGAACAATGAAA
CACAGGCTCTCCGGACGAACAAGAAAGTTGAAAGCGAGGCGAGCATCAAG
GTGAAAAAGGCCCATAGTACAAGGAGGAGACGTTCACATGGGACTCCGAA
TTACTCCCCATACTCTCCTATGGTGTTCGACTACAACATCCATCGGCGAG
CGAGTGCTCCACCTCTACCAAGCAAGAACTTCTTTGGCCCATCAGAAACG
TTCGAGGATAGTCACGCTGTCTCCGAGCAAAGTCCGACTTTGGAACAGTG
CTTGGTTCTTCCTCCGAAATTAAGTGGCGAGAACTCTTACTCAGCTGGAT
TCGACAATCAGTGTTCACCTGCTACAGAATTGATCCTAGGTGGAGGCAGC
TTTCTTACCTGGGAAAAGCCGGATGCAGAGCCCCAGGAGGGGAGGACGCC
CAGCAAGCCAGCAGCTTTAACCACTGTGGAGACCGAGGAACTCGCTTTGC
CAGCAACAGCCTCTACCGGTGGGCACGCAGGCCCCAAACCTTCCCCTCGG
GACATATTAGAGAGATCGAGTACTTCTTATGGGAAGAATCTAGAGCTGTA
CGTGCTACCCAGTGGTGGGAACGGGACTGTGGAAGGGTATGGAGATGAGA
GCGTTTCCGACCCTGTGGCTGTTGACCATGACTTCACCGTCCTCGATGCG
ACCCACTTTGGAGATTTGGGGGGGGGGAGGGACTCGGGTTGGGTCTTGCC
ATACATCCGTGTTGATGCCCAAGAAGTCACTGTC
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