mRNA_D-mesarthrocarpus_Contig934.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig934.2.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 163 bits (413), Expect = 4.920e-44 Identity = 88/181 (48.62%), Postives = 116/181 (64.09%), Query Frame = 3
Query: 258 VAKNCIAPKRVHWNAVLSIVAYVQAYPNLGMTY--GGVQECVMSASGDASYAGDIDNRRSVTGGAVIFCGAAVAWMSKMQKVVALSFTESEYTALSSVAQEISFLRNVLEFIQPNLHRVCIEMFEDNDGASKLVKNAISTGRTKHIDVRHHFLRDLVGRKQIRVTLVKSADQLADVLTKYL 794
VA+ C +PK +HW A L I+ YV +LG+T+ G V M DA YA +RRSV+GG V+ G ++W S+ QK V LS TE+EY +L+ V +E+ FLR V F+ P CI +FEDN GA +L +N IS +KHIDVRHHF+R+LVGRK+I + V+SA Q AD LTK L
Sbjct: 242 VARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKAL 422
BLAST of mRNA_D-mesarthrocarpus_Contig934.2.1 vs. uniprot
Match: A0A6H5KEZ8_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEZ8_9PHAE) HSP 1 Score: 157 bits (397), Expect = 5.050e-44 Identity = 86/181 (47.51%), Postives = 113/181 (62.43%), Query Frame = 3
Query: 258 VAKNCIAPKRVHWNAVLSIVAYVQAYPNLGMTY--GGVQECVMSASGDASYAGDIDNRRSVTGGAVIFCGAAVAWMSKMQKVVALSFTESEYTALSSVAQEISFLRNVLEFIQPNLHRVCIEMFEDNDGASKLVKNAISTGRTKHIDVRHHFLRDLVGRKQIRVTLVKSADQLADVLTKYL 794
VA+ C +PK VHWNA + I+ Y + + G+++ G V+ + DA +A +RRSV+GG V G AV+W S+ QK V LS TE+EY AL V + I FLR + F+ P + CI +FEDN GA +L +N IS +KHIDVRHHFLR+LV RK+I V V S Q AD LTK L
Sbjct: 20 VARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGEVVKVILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSL 200
BLAST of mRNA_D-mesarthrocarpus_Contig934.2.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE) HSP 1 Score: 159 bits (401), Expect = 9.150e-44 Identity = 86/181 (47.51%), Postives = 114/181 (62.98%), Query Frame = 3
Query: 258 VAKNCIAPKRVHWNAVLSIVAYVQAYPNLGMTY--GGVQECVMSASGDASYAGDIDNRRSVTGGAVIFCGAAVAWMSKMQKVVALSFTESEYTALSSVAQEISFLRNVLEFIQPNLHRVCIEMFEDNDGASKLVKNAISTGRTKHIDVRHHFLRDLVGRKQIRVTLVKSADQLADVLTKYL 794
VA+ C +PK +HW A L I+ YV +LG+T+ G V M DA YA +RRSV+GG V+ G ++W S+ QK V LS TE+EY +L+ V +E+ FLR V F+ P CI + EDN GA +L +N IS +KHIDVRHHF+R+LV RK+I + V+SA Q AD LTK L
Sbjct: 58 VARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCMSWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVRRFVLPEAGMPCIPVLEDNQGAIQLAQNPISNSTSKHIDVRHHFIRELVRRKEISIFHVESAYQHADFLTKAL 238
BLAST of mRNA_D-mesarthrocarpus_Contig934.2.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE) HSP 1 Score: 163 bits (413), Expect = 7.130e-43 Identity = 88/181 (48.62%), Postives = 116/181 (64.09%), Query Frame = 3
Query: 258 VAKNCIAPKRVHWNAVLSIVAYVQAYPNLGMTY--GGVQECVMSASGDASYAGDIDNRRSVTGGAVIFCGAAVAWMSKMQKVVALSFTESEYTALSSVAQEISFLRNVLEFIQPNLHRVCIEMFEDNDGASKLVKNAISTGRTKHIDVRHHFLRDLVGRKQIRVTLVKSADQLADVLTKYL 794
VA+ C +PK +HW A L I+ YV +LG+T+ G V M DA YA +RRSV+GG V+ G ++W S+ QK V LS TE+EY +L+ V +E+ FLR V F+ P CI +FEDN GA +L +N IS +KHIDVRHHF+R+LVGRK+I + V+SA Q AD LTK L
Sbjct: 416 VARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKAL 596
BLAST of mRNA_D-mesarthrocarpus_Contig934.2.1 vs. uniprot
Match: A0A6H5KD60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD60_9PHAE) HSP 1 Score: 156 bits (394), Expect = 1.270e-42 Identity = 84/181 (46.41%), Postives = 113/181 (62.43%), Query Frame = 3
Query: 258 VAKNCIAPKRVHWNAVLSIVAYVQAYPNLGMTYG--GVQECVMSASGDASYAGDIDNRRSVTGGAVIFCGAAVAWMSKMQKVVALSFTESEYTALSSVAQEISFLRNVLEFIQPNLHRVCIEMFEDNDGASKLVKNAISTGRTKHIDVRHHFLRDLVGRKQIRVTLVKSADQLADVLTKYL 794
VA+ C +PK +HW A L I+ YV +LG+T+G V M DA YA +RRSV+GG V+ ++W S+ Q+ V LS TE+EY +L+ V +E+ FLR V F+ P CI +FEDN GA +L +N IS +KH DVRHHF+ +LVGRK+I + V+SA Q AD LTK L
Sbjct: 97 VARYCASPKEIHWRAGLGILGYVVRTSDLGITFGRGSVAGLSMEVFADADYASKAADRRSVSGGFVMCGRGCISWFSRTQQCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHFDVRHHFIGELVGRKEISIFYVESAYQHADFLTKAL 277
BLAST of mRNA_D-mesarthrocarpus_Contig934.2.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE) HSP 1 Score: 160 bits (404), Expect = 1.590e-42 Identity = 87/181 (48.07%), Postives = 114/181 (62.98%), Query Frame = 3
Query: 258 VAKNCIAPKRVHWNAVLSIVAYVQAYPNLGMTY--GGVQECVMSASGDASYAGDIDNRRSVTGGAVIFCGAAVAWMSKMQKVVALSFTESEYTALSSVAQEISFLRNVLEFIQPNLHRVCIEMFEDNDGASKLVKNAISTGRTKHIDVRHHFLRDLVGRKQIRVTLVKSADQLADVLTKYL 794
VA+ C +PK VHWNA + I+ Y + + G+++ G V+ + DA +A +RRSV+GG V G AV+W S+ QK V LS TE+EY AL V +EI FLR + F+ P + CI +FEDN GA +L +N IS +KHIDVRHHFLR+LV RK+I V V S Q AD LTK L
Sbjct: 266 VARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSL 446
BLAST of mRNA_D-mesarthrocarpus_Contig934.2.1 vs. uniprot
Match: A0A6H5KSZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ5_9PHAE) HSP 1 Score: 155 bits (393), Expect = 1.620e-42 Identity = 85/181 (46.96%), Postives = 113/181 (62.43%), Query Frame = 3
Query: 258 VAKNCIAPKRVHWNAVLSIVAYVQAYPNLGMTY--GGVQECVMSASGDASYAGDIDNRRSVTGGAVIFCGAAVAWMSKMQKVVALSFTESEYTALSSVAQEISFLRNVLEFIQPNLHRVCIEMFEDNDGASKLVKNAISTGRTKHIDVRHHFLRDLVGRKQIRVTLVKSADQLADVLTKYL 794
VA+ C +PK VHWNA + I+ Y + + G+++ G V+ + DA +A +RRSV+GG V G AV+W S QK V LS TE+EY AL V +EI FLR + F+ P + CI +FEDN GA +L +N IS +KHIDVRHHFLR+LV R++ V V S +Q AD LTK L
Sbjct: 96 VARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSITQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGIPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVEREEFSVMHVPSPNQRADCLTKSL 276
BLAST of mRNA_D-mesarthrocarpus_Contig934.2.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE) HSP 1 Score: 155 bits (393), Expect = 3.350e-42 Identity = 84/179 (46.93%), Postives = 112/179 (62.57%), Query Frame = 3
Query: 258 VAKNCIAPKRVHWNAVLSIVAYVQAYPNLGMTY--GGVQECVMSASGDASYAGDIDNRRSVTGGAVIFCGAAVAWMSKMQKVVALSFTESEYTALSSVAQEISFLRNVLEFIQPNLHRVCIEMFEDNDGASKLVKNAISTGRTKHIDVRHHFLRDLVGRKQIRVTLVKSADQLADVLTK 788
VA+ C +PK VHW A L I+ YV+ +G+T+ G V M DA YA +RRSV+GG V+ G V W S+ QK V LS TE+EY A++ V +E+ FLR V F+ P+ CI +FEDN GA ++ N I+ +KHIDVRHHF+R+LV RK+I +T V + Q AD LTK
Sbjct: 125 VARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTK 303
BLAST of mRNA_D-mesarthrocarpus_Contig934.2.1 vs. uniprot
Match: A0A6H5KPF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPF9_9PHAE) HSP 1 Score: 156 bits (395), Expect = 3.440e-42 Identity = 86/181 (47.51%), Postives = 113/181 (62.43%), Query Frame = 3
Query: 258 VAKNCIAPKRVHWNAVLSIVAYVQAYPNLGMTY--GGVQECVMSASGDASYAGDIDNRRSVTGGAVIFCGAAVAWMSKMQKVVALSFTESEYTALSSVAQEISFLRNVLEFIQPNLHRVCIEMFEDNDGASKLVKNAISTGRTKHIDVRHHFLRDLVGRKQIRVTLVKSADQLADVLTKYL 794
VA+ C +PKRVHW+A + I+ Y + +G+++ G V+ + DA +A +RRSV+GG V G V+W S+ QK V LS TE+ Y AL V +EI FLR V F+ P + CI +FEDN GA +L +N IS +KHIDVRHHFLR+LV RK+I V V S Q AD LTK L
Sbjct: 155 VARYCASPKRVHWDAAMGILGYAKRTSYMGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGVVSWFSRTQKCVTLSTTEAGYVALGDVVKEILFLRQVWRFMLPKVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKRL 335
BLAST of mRNA_D-mesarthrocarpus_Contig934.2.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE) HSP 1 Score: 155 bits (392), Expect = 5.580e-42 Identity = 85/182 (46.70%), Postives = 114/182 (62.64%), Query Frame = 3
Query: 258 VAKNCIAPKRVHWNAVLSIVAYVQAYPNLGMTY--GGVQECVMSASGDASYAGDIDNRRSVTGGAVIFCGAAVAWMSKMQKVVALSFTESEYTALSSVAQEISFLRNVLEFIQPNLHRVCIEMFEDNDGASKLVKNAISTGRTKHIDVRHHFLRDLV-GRKQIRVTLVKSADQLADVLTKYL 794
VA+ C +PK +HW A L I+ YV + G+T+ G + M DA YA +RRSV+GG V+ G ++W S+ QK V LS TE+EY +L+ V +E+ FLR V F+ P CI +FEDN GA +L +N IS KHIDVRHHF+R+LV GRK+I + V+SA Q AD LT+ L
Sbjct: 141 VARYCASPKEIHWRAGLGILGYVVRTSDSGITFRRGSIAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNLKHIDVRHHFIRELVVGRKEISIFHVESAYQHADFLTRAL 322 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig934.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig934.2.1 >prot_D-mesarthrocarpus_Contig934.2.1 ID=prot_D-mesarthrocarpus_Contig934.2.1|Name=mRNA_D-mesarthrocarpus_Contig934.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=149bp MTYGGVQECVMSASGDASYAGDIDNRRSVTGGAVIFCGAAVAWMSKMQKVback to top mRNA from alignment at D-mesarthrocarpus_Contig934:8240..9033+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig934.2.1 ID=mRNA_D-mesarthrocarpus_Contig934.2.1|Name=mRNA_D-mesarthrocarpus_Contig934.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=794bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig934:8240..9033+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig934:8240..9033+ >mRNA_D-mesarthrocarpus_Contig934.2.1 ID=mRNA_D-mesarthrocarpus_Contig934.2.1|Name=mRNA_D-mesarthrocarpus_Contig934.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=447bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig934:8240..9033+ (Discosporangium mesarthrocarpum MT17_79)back to top |