mRNA_D-mesarthrocarpus_Contig933.9.2 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig933.9.2
Unique NamemRNA_D-mesarthrocarpus_Contig933.9.2
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig933.9.2 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 426 bits (1094), Expect = 2.000e-132
Identity = 243/488 (49.80%), Postives = 307/488 (62.91%), Query Frame = 2
Query:  746 CDATIPINVRYAGGTERIYLEHSLDSKGTPGSGGCATLSLIYQTRMDVKTGVPKGPIYILD-EKDEIDMTPFAPYTGKWYVEADIFVLDDITLEI--VDE-----ELRIESTETRFHNLRGHGGSLYFSGAVVTSWDLSVGGPREAYDVGRSYISCISEMTGYGD--CGGGLGVAKNDMGECRLDVLETEIGYLGWMDSESYGLTWKVRGFCVDKSNPEVFDEVNVYGDIIDSDIHHMYYGMYSYGHQGGTWVRNKMHDNAQYGFDPHDDSDFLTISENDVYNNGNHGIIASKRCNDVEITNNYVHDGTGLIAAGIFLHRSSDRAVVSGNTVENMPDAGIAIMESFDLDIFDNTFTNIKYGVRISVGGANNHIHDNTFETISQYGLYTYQGSDSPDTDSDGRPKDNMFIDNEVLDCIVCMKIGEGDNNMFEGNTFE---GRNIKFQFRNARETRFLTNTFPSNAEFS---TTTSCFTDDSISEVSPTC 2161
            CD+ I +++RYAG T+R+YLE S D +     GGCATL  I+++R        K P+Y +D +  ++  T     TG W +  +++V D ITL++   DE     ELR+ ST   + NLR HGGSL F G  V SWD S   P E    GRSYIS +SE+    D  C G    AKN MGE R+D+  +EIGYLG+ DSESYGLTWKVRGFC DKSNPE+FD+VNVYG++ DSDIHH+ +G+Y+YGHQ G W RNKMHDN+ YGFDPHDDSDFLTI +N+VYNNG HGIIASKRCN V I  N V+ G    +AGIFLHRSSD A+V GN V +  DAG+A++ESF+ D+ +NTF N KYGVR+SVG A+N   +N     S+Y  YTY GSD PD  S GR ++N+F  N        +KI E D   F  N FE      +  +F +A  +    NT     +F    T  SCF  +S S   P C
Sbjct:   43 CDSDIEVSIRYAGTTKRLYLE-SADGETR---GGCATLGQIWESRAG------KAPLYAVDPDSGDVSETE----TGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGN---AKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAET-SAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGYEPVC 512          
BLAST of mRNA_D-mesarthrocarpus_Contig933.9.2 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 437 bits (1125), Expect = 3.480e-132
Identity = 221/400 (55.25%), Postives = 275/400 (68.75%), Query Frame = 2
Query:  845 GCATLSLIYQTRMDVKTGVPKGPIYILDEKDEIDMTPFAPYTGKWYVEADIFVLDDITLEIVD-------EELRIESTETR-FHNLRGHGGSLYFSGAVVTSWDLSVGGPREAYDVGRSYISCISEMTGYGDCGGGLGVAKNDMGECRLDVLETEIGYLGWMDSESYGLTWKVRGFCVDKSNPEVFDEVNVYGDIIDSDIHHMYYGMYSYGHQGGTWVRNKMHDNAQYGFDPHDDSDFLTISENDVYNNGNHGIIASKRCNDVEITNNYVHDGTGLIAAGIFLHRSSDRAVVSGNTVENMPDAGIAIMESFDLDIFDNTFTNIKYGVRISVGGANNHIHDNTFETISQYGLYTYQGSDSPDTDSDGRPKDNMFIDNEVLDCIVCMKIGEGDNNMFEGNTF 2020
            GC T++ +Y  R     G  KGP+Y+LD+ D   +   +  T  W + A++++                  +LRI+ST +  FH +RGHGGSLYF   +VTSWD     P+E Y+ GRS+++C+SE     DC G    AKN+MGECR+D++ +EI YLG+ DSESYG+TWKVRGFC D SNPEVF+  NVYGD+  SDIHH+YYG YSYGHQGG W  NKMHDN QYGFDPHDDSD+LTI+ N+VYNN NHGIIASKRCN+V+I  N V DG G  AAGIFLHRSSD A V  NT+ NM DAGIA++ESFD  I+ N     KYG+R+S+G  NN ++ N+F  ISQYGLYTY+GSD PD  SDGRP  N+   N V DC + +KI EGD+N F  NTF
Sbjct:  448 GCFTMTDLYNFRGTENDGSSKGPVYMLDD-DGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGN---AKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDG-GAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDV-SDGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTF 841          
BLAST of mRNA_D-mesarthrocarpus_Contig933.9.2 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 419 bits (1077), Expect = 6.880e-131
Identity = 222/436 (50.92%), Postives = 287/436 (65.83%), Query Frame = 2
Query:  815 LDSKGTPGSGGCATLSLIYQTRMDVKTGVPKGPIYILDEKDEIDMTPFAPYTGKWYVEADIFVLDDITLEIVDE-------ELRIESTE-TRFHNLRGHGGSLYFSGAVVTSWDLSVGGPREAYDVGRSYISCISE-MTGYGDCGGGLGVAKNDMGECRLDVLETEIGYLGWMDSESYGLTWKVRGFCVDKSNPEVFDEVNVYGDIIDSDIHHMYYGMYSYGHQGGTWVRNKMHDNAQYGFDPHDDSDFLTISENDVYNNGNHGIIASKRCNDVEITNNYVHDGTGLIAAGIFLHRSSDRAVVSGNTVENMPDAGIAIMESFDLDIFDNTFTNIKYGVRISVGGANNHIHDNTFETISQYGLYTYQGSDSPDTDSDGRPKDNMFIDNEVLDCIVCMKIGEGDNNMFEGNTFEGRNIKFQFRNARETRFLTNTFPSN 2095
            +D++G    GGC TLS +Y  +     G  KGP+++LD  D +D T     TGKW + AD+FV    TL    +       ELRI ST  + F  +RGHGG+LYF   +VTSWD+    P+E Y  GRS+I C+SE +TG   C      A N+MGECR+D++++E+GYLG+  SE+YG+TWKVRGFC D SNP+VFD+VNVYGD+  SDIHHMYYGMYS+GHQGG W  N MHDN QYGFDPHDDSD+L I+ N VYNN NHGIIASKRCN+V+I +N V+DG G  AAGIFLHRS D + V GNT+ NM DAGIA++E+   DI DN     ++G+R+ +G +NN +HDN F+ I   G++TY GSD P     GRP DN F +N +      +KI E DN     N F G   + +F NA +  +  N+ P+N
Sbjct:    2 IDAEGD--GGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTT-TGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC------AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDG-GADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGT-TEIEFNNAIDIVWSGNSIPTN 425          
BLAST of mRNA_D-mesarthrocarpus_Contig933.9.2 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 421 bits (1082), Expect = 9.630e-131
Identity = 242/483 (50.10%), Postives = 303/483 (62.73%), Query Frame = 2
Query:  758 IPINVRYAGGTERIYLEHSLDSKGTPGSGGCATLSLIYQTRMDVKTGVPKGPIYILDEKDEIDMTPFAPYTGKWYVEADIFVLDDITLEIVD-------EELRIESTETRFHNLRGHGGSLYFSGAVVTSWDLSVGGPREAYDVGRSYISCISEMTGYGD--CGGGLGVAKNDMGECRLDVLETEIGYLGWMDSESYGLTWKVRGFCVDKSNPEVFDEVNVYGDIIDSDIHHMYYGMYSYGHQGGTWVRNKMHDNAQYGFDPHDDSDFLTISENDVYNNGNHGIIASKRCNDVEITNNYVHDGTGLIAAGIFLHRSSDRAVVSGNTVENMPDAGIAIMESFDLDIFDNTFTNIKYGVRISVGGANNHIHDNTFETISQYGLYTYQGSDSPDTDSDGRPKDNMFIDNEVLDCIVCMKIGEGDNNMFEGNTFE---GRNIKFQFRNARETRFLTNTFPSNAEFSTTT---SCFTDDSISEVSPTC 2161
            I +++RYAG T R+YLE S D+  T   GGC TL  I+++R        KGP+Y +D  D  +++  A  TG W +  +++V D ITL++         +ELR+ ST   F NLR HGGSL F    V SWD S   P E    GRSYIS ISE+    D  C G    AKN MGE R+D+  +EIGYLG+ DSESYGLTWKVRGFC DKSNPEVFD+VNVYG++ DSDIHHM +G+Y+YGHQ G W RNKMHDN+ YGFDPHDDSDFLTI +N+VYNNG HGIIASKRCN V I  N V+ G    +AGIFLHRSSD A+V GN V +  DAG+A++ESF+ D+ +NTF N KYGVR SVG A+N   +NT    ++Y  Y+Y G+D PD  S GR ++N+F  N        +KI E D   F  N FE      +  +F NA E     NT   + EF       +CF  ++ S   P C
Sbjct:   42 IAVSIRYAGTTARLYLE-SADNGTT--RGGCVTLGQIWESRAG------KGPLYAVDP-DSGNVSTSA--TGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGN---AKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAET-SAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPVC 508          
BLAST of mRNA_D-mesarthrocarpus_Contig933.9.2 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 412 bits (1059), Expect = 3.310e-127
Identity = 213/424 (50.24%), Postives = 284/424 (66.98%), Query Frame = 2
Query:  845 GCATLSLIYQTRMDVKTGVPKGPIYILDEKDEIDMTPFAPYTGKWYVEADIFVLDDITLEIVD-------EELRIEST-ETRFHNLRGHGGSLYFSGAVVTSWDLSVGGPREAYDVGRSYISCISEMTGYGDCGGGLGVAKNDMGECRLDVLETEIGYLGWMDSESYGLTWKVRGFCVDKSNPEVFDEVNVYGDIIDSDIHHMYYGMYSYGHQGGTWVRNKMHDNAQYGFDPHDDSDFLTISENDVYNNGNHGIIASKRCNDVEITNNYVHDGTGLIAAGIFLHRSSDRAVVSGNTVENMPDAGIAIMESFDLDIFDNTFTNIKYGVRISVGGANNHIHDNTFETISQYGLYTYQGSDSP-DTDSDGRPKDNMFIDNEVLDCIVCMKIGEGDNNMFEGNTFEGRNIKFQFRNARETRFLTNTFP 2089
            GC T++ +Y  R++   G  KGPI+ LD+     + P    + KW + A++ +                 +ELRI+ST  T FH +R HGGS+YF   +VTSWD     P+  Y  GRS+++C+SE      C   +G A+N+MGECR+D++ +EIGYLG+ DSESYGLTWKVRGFC D SNP+VFD  NVYG++I SDIHH YYG YSYGHQGG W  N+MHDN QYGFDPHDDSD+LT             IIASKRCN+V+I NN V+DG G  AAGIFLHRSSD A+V  N V +M DAG+A++ES + DI++N F+++K+G+R+S+G + NH+H+N FE +S  GLYTYQGSD P D  SDGRP DN+F +N +L+    +KI EGD+ +   N F G + + +F +A+ TR+  NT P
Sbjct:   86 GCFTITDLYNFRLE-SDGSAKGPIFNLDDSYNTVLNPKV-LSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVC---VGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDG-GPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTS-ELEFFDAQNTRWKGNTLP 490          
BLAST of mRNA_D-mesarthrocarpus_Contig933.9.2 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 387 bits (995), Expect = 8.560e-119
Identity = 210/435 (48.28%), Postives = 275/435 (63.22%), Query Frame = 2
Query:  839 SGGCATLSLIYQTRMDVKTGVPKGPIYILDEKDEIDMTPFAPYTGKWYVEADIFVLDDITLEIVD-------EELRIEST-ETRFHNLRGHGGSLYFSGAVVTSWDLSVGGPREAYDVGRSYISCISEMTGYGDCGGGLGVAKNDMGECRLDVLETEIGYLGWMDSESYGLTWKVR---------GFCVDKSNPEVFDEVNVYGDIIDSDIHHMYYGMYSYGHQGGTWVRNKMHDNAQYGFDPHDDSDFLTISENDVYNNGNHGIIASKRCNDVEITNNYVHDGTGLIAAGIFLHRSSDRAVVSGNTVENMPDAGIAIMESFDLDIFDNTFTNIKYGVRISVGGANNHIHDNTFETISQYGLYTYQGSDSPDTDSDGRPKDNMFIDNEVLDCIVCMKIGEGDNNMFEGNTFEGRNIKFQFRNARETRFLTNTFPS 2092
            S GC TL+ +Y  R     G  KGP+Y+LD        P +  T KW +EA+++V +      +        +ELRI+ST    ++ +RGHGGS+YFS  VVTSWD     P+E Y+ GRS+++C+SE      C G   +AKNDMGECR+D++ +E+GY+G+ DSESYGLTWKVR         GFC D SNP+VF+  NVYGDI +SDIHHMYYG YSYGHQGG W  N+MHDN QY            ++ N VYNN NHGIIASKRCN+V+I +N V DG G  A GIFLHRSSD A V GN + NMPDAGIA++ESF+ DI DN    +++G+R+S+G   N ++DN F   S +GLYTY GSD PD  S+GRP  N F +N+V +    +K    DN +   N F G   + +F +A+ T +  N+ PS
Sbjct:   19 SEGCFTLTDLYNFRGTENDGSSKGPLYMLDGSGSKITAPTS-VTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDG---MAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDG-GPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDV-SNGRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTE-ELEFYDAQATTWSGNSLPS 434          
BLAST of mRNA_D-mesarthrocarpus_Contig933.9.2 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 387 bits (995), Expect = 2.540e-118
Identity = 212/447 (47.43%), Postives = 283/447 (63.31%), Query Frame = 2
Query:  746 CDATIPINVRYAGGTERIYLEHSLDSKGTPGSGGCATLSLIYQTRMDVKTGVPKGPIYILDEKDEIDMTPFAPYTGKWYVEADIFVLDDITLEIVD-------EELRIESTETRFHNLRGHGGSLYFSGAVVTSWDLSVGGPREAYDVGRSYISCISEMTGYGDCGGGLGVAKNDMGECRLDVLETEIGYLGWMDSESYGLTWKVRGFCVDKSNPEVFDEVNVYGDIIDSDIHHMYYGMYSYGHQGGTWVRNKMHDNAQYGFDPHDDSDFLTISENDVYNNGNHGIIASKRCNDVEITNNYVHDGTGLIAAGIFLHRSSDRAVVSGNTVENMPDAGIAIMESFDLDIFDNTFTNIKYGVRISVGGANNHIHDNTFETISQYGLYTYQGSDSPDTDSDGRPKDNMFIDNEVLDCIVCMKIGEGDNNMFEGNTFEGRNIKFQFRNARET 2065
            CD +I +++RY+   ER+YLE S DSK     GGC TL  I++ +        + P+Y +D K   D++  A  TG W +  ++FV D ITL++         +ELR+ ST   F NLR HGGSL F    V +WD S+ GP    + GRSY+S +SE+    D     G AKN+MGE R+D+ ++E+GYLG+  SESYGLTWKVRGFCVDKSN ++F++VNVYG+I DSDIHH  +G+Y+YGHQ G W RNKMHDN+ YGFDPHDDSDFLTI +N+VY+NG HGIIASKRCN V I  N V+ G    +AGIFLHR                DAG+A+MESF+ D+ DN F N KYG+R SVG   N   +N     ++Y  Y+Y GSD+PD    GR +DN+F +N ++  +  +K+ + D   F  NTFE      +F +A++T
Sbjct:   36 CDESIAVSIRYSSVYERLYLE-SADSKTR---GGCVTLEQIWEHQRG------EAPLYAVDSKSG-DISDSA--TGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVI-TDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGA-TSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVVDSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFEDATT-IRFNDAKKT 466          
BLAST of mRNA_D-mesarthrocarpus_Contig933.9.2 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 384 bits (987), Expect = 1.560e-117
Identity = 205/433 (47.34%), Postives = 280/433 (64.67%), Query Frame = 2
Query:  746 CDATIPINVRYAGGTERIYLEHSLDSKGTPGSGGCATLSLIYQTRMDVKTGVPKGPIYILDEKDEIDMTPFAPYTGKWYVEADIFVLDDITLEIVD-------EELRIESTETRFHNLRGHGGSLYFSGAVVTSWDLSVGGPREAYDVGRSYISCISEMTGYGDCGGGLGVAKNDMGECRLDVLETEIGYLGWMDSESYGLTWKVRGFCVDKSNPEVFDEVNVYGDIIDSDIHHMYYGMYSYGHQGGTWVRNKMHDNAQYGFDPHDDSDFLTISENDVYNNGNHGIIASKRCNDVEITNNYVHDGTGLIAAGIFLHRSSDRAVVSGNTVENMPDAGIAIMESFDLDIFDNTFTNIKYGVRISVGGANNHIHDNTFETISQYGLYTYQGSDSPDTDSDGRPKDNMFIDNEVLDCIVCMKIGEGDNNMFEGNTFE 2023
            CD++I ++VRY   + R+Y+E    S      GGC TL  I++ ++D        P+Y +D K   D++  A  TG W +  +++V D ITL++         +ELR+ ST   F +LR +GGSL F    V +WD S   P +    GRSYIS +SE+    D     G AKN+MGE R+D+  +E+ YLG+  +E+YGLTWKVRGFCVDK NPE+FD+VNVYG+I DSDIHH  +G+Y+YGHQ G W RNKMHDN+ YGFDPHDDSDFLTI +N+V+NNG HGIIASKRCN V I  N V+ G+   +AGIFLHRSSD  +V GN V +  DAG+A++ESF+ D+ DNTF N KYGVR+SVG   N    N     +++  ++Y G+D P+    GR +DN+F++N ++  +  + + E D   F  NTF+
Sbjct:   10 CDSSIAVSVRYNAESARLYIE----SANGRTRGGCVTLEQIWEQQVD------GSPLYAVDPKSG-DVSRSA--TGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVI-TDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSG-SAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFK 427          
BLAST of mRNA_D-mesarthrocarpus_Contig933.9.2 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 376 bits (965), Expect = 2.280e-115
Identity = 208/378 (55.03%), Postives = 256/378 (67.72%), Query Frame = 2
Query:  758 IPINVRYAGGTERIYLEHSLDSKGTPGSGGCATLSLIYQTRMDVKTGVPKGPIYILDEKDEIDMTPFAPYTGKWYVEADIFVLDDITLEIVD-------EELRIESTETRFHNLRGHGGSLYFSGAVVTSWDLSVGGPREAYDVGRSYISCISEMTGYGD--CGGGLGVAKNDMGECRLDVLETEIGYLGWMDSESYGLTWKVRGFCVDKSNPEVFDEVNVYGDIIDSDIHHMYYGMYSYGHQGGTWVRNKMHDNAQYGFDPHDDSDFLTISENDVYNNGNHGIIASKRCNDVEITNNYVHDGTGLIAAGIFLHRSSDRAVVSGNTVENMPDAGIAIMESFDLDIFDNTFTNIKYGVRISVGGANNHIHDNTFETISQ 1864
            I +++RYA  T R+YLE S D+  T   GGC TL  I+++R        KGP+Y +D  D  +++  A  TG W +  +++V D ITLE+         +ELR+ ST   F NLR HGGSL F    V SWD S   P E    GRSYIS ISE+    D  C G    AKN MGE R+D+  +EIGYLG+ DSESYGLTWKVRGFC DKSNPEVFD+VNVYG++ DSDIHHM +G+Y+YGHQ G W RNKMHDN+ YGFDPHDDSDFLTI +N+VYNNG HGIIASKRCN V I  N V+ G    +AGIFLHRSSD A+V GN V +  DAG+A++ESF+ D+ +NTF N KYGVR SVG A+N   +NT    ++
Sbjct:   42 IAVSIRYAESTARLYLE-SADNGTT--RGGCVTLGQIWESRAG------KGPLYAVDP-DSGNVSTSA--TGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGN---AKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAET-SAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 403          
BLAST of mRNA_D-mesarthrocarpus_Contig933.9.2 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 382 bits (981), Expect = 1.420e-114
Identity = 212/433 (48.96%), Postives = 284/433 (65.59%), Query Frame = 2
Query:  842 GGCATLSLIYQTRMDVKTGVPKGPIYILDEK-DEIDMTPFAPYTGKWYVEADIFVLDDITLEIVD-------EELRIESTETRFHNLRGHGGSLYFSGAVVTSWDLSVGGPREAYDVGRSYISCISEM--TGYGDCGGGLGVAKNDMGECRLDVLETEIGYLGWMDSESYGLTWKVRGFC-VDKS-----NPEVFDEVNVYGDIIDSDIHHMYYGMYSYGHQGGTWVRNKMHDNAQYGFDPHDDSDFLTISENDVYNNGNHGIIASKRCNDVEITNNYVHDGTGLIAAGIFLHRSSDRAVVSGNTVENMPDAGIAIMESFDLDIFDNTFTNIKYGVRISVGGANNHIHDNTFETISQYGLYTYQGSDSPDT-DSDGRPKDNMFIDN--EVLDCIVCMKIGEGDNNMFEGNTFEGRNIKFQFRNARETRFLTNT 2083
            GGC TL+ +Y+ +         GP+Y+LDE  D +  TP    TG W ++ ++ V+D  TL +         + LR+ ST   F  +RG+GG+L+F    VTSWD   G  RE    GRS+I+C+++   +   DC G    +  + GECR+D++ + +G +GW D+ESYGLTWKVRG C +D       N E+F++ NVYGDI++S+I+ MYYG YSYGHQGG W  N M DN QYGFDPHDDSD LTIS N VY NGNHGIIASKRCN+V+I NN V+DG G  A GIFLHRSSD A V  N V NM DAG+A+MES+D +I+DN+FTN +YG+R+S+G   N I +N F  I+QYGLYTY GSD PD  +S+GRP DN+F  N  E     + + I EGD+N+F  N F G +  ++F ++ +T ++ NT
Sbjct:  196 GGCGTLTQMYEAQEG------DGPLYVLDENNDVVGGTP----TGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLSTSDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGR---SNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDG-GEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVST-YEFEDSSDTTWVDNT 613          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig933.9.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXE4_ECTSI2.000e-13249.80Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D8LC73_ECTSI3.480e-13255.25Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D7FRR8_ECTSI6.880e-13150.92Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI9.630e-13150.10Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
D8LRM4_ECTSI3.310e-12750.24Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
A0A6H5JGU8_9PHAE8.560e-11948.28MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
Q7XAJ7_9PHAE2.540e-11847.43Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
Q7XAJ8_9PHAE1.560e-11747.34Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
D7FXE5_ECTSI2.280e-11555.03Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G8D9_ECTSI1.420e-11448.96Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig933contigD-mesarthrocarpus_Contig933:14533..21261 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LC73
PFAMsWSC
Model size3922
Max annot lvl2759|Eukaryota
KEGG koko:K11244
KEGG Pathwayko04011,ko04139,map04011,map04139
Hectar predicted targeting categorysignal peptide
Exons13
Evalue2.76e-138
EggNOG OGsKOG4157@1|root,KOG4157@2759|Eukaryota
Descriptionprotein xylosyltransferase activity
Cds size2361
COG categoryU
BRITEko00000,ko00001
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791087.2887237-UTR-D-mesarthrocarpus_Contig933:14532..147941680791087.2887237-UTR-D-mesarthrocarpus_Contig933:14532..14794Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig933 14533..14794 +
1680791087.474018-UTR-D-mesarthrocarpus_Contig933:19962..212611680791087.474018-UTR-D-mesarthrocarpus_Contig933:19962..21261Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig933 19963..21261 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791087.3037791-CDS-D-mesarthrocarpus_Contig933:14794..148621680791087.3037791-CDS-D-mesarthrocarpus_Contig933:14794..14862Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig933 14795..14862 +
1680791087.3150554-CDS-D-mesarthrocarpus_Contig933:15114..154161680791087.3150554-CDS-D-mesarthrocarpus_Contig933:15114..15416Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig933 15115..15416 +
1680791087.3315582-CDS-D-mesarthrocarpus_Contig933:15642..158101680791087.3315582-CDS-D-mesarthrocarpus_Contig933:15642..15810Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig933 15643..15810 +
1680791087.3431373-CDS-D-mesarthrocarpus_Contig933:16172..163961680791087.3431373-CDS-D-mesarthrocarpus_Contig933:16172..16396Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig933 16173..16396 +
1680791087.3604343-CDS-D-mesarthrocarpus_Contig933:16553..166461680791087.3604343-CDS-D-mesarthrocarpus_Contig933:16553..16646Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig933 16554..16646 +
1680791087.3725863-CDS-D-mesarthrocarpus_Contig933:16883..170331680791087.3725863-CDS-D-mesarthrocarpus_Contig933:16883..17033Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig933 16884..17033 +
1680791087.382264-CDS-D-mesarthrocarpus_Contig933:17280..173491680791087.382264-CDS-D-mesarthrocarpus_Contig933:17280..17349Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig933 17281..17349 +
1680791087.3920777-CDS-D-mesarthrocarpus_Contig933:17540..176341680791087.3920777-CDS-D-mesarthrocarpus_Contig933:17540..17634Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig933 17541..17634 +
1680791087.4048269-CDS-D-mesarthrocarpus_Contig933:17875..179351680791087.4048269-CDS-D-mesarthrocarpus_Contig933:17875..17935Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig933 17876..17935 +
1680791087.4158475-CDS-D-mesarthrocarpus_Contig933:18086..182961680791087.4158475-CDS-D-mesarthrocarpus_Contig933:18086..18296Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig933 18087..18296 +
1680791087.4295301-CDS-D-mesarthrocarpus_Contig933:18551..187161680791087.4295301-CDS-D-mesarthrocarpus_Contig933:18551..18716Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig933 18552..18716 +
1680791087.4425113-CDS-D-mesarthrocarpus_Contig933:18910..190541680791087.4425113-CDS-D-mesarthrocarpus_Contig933:18910..19054Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig933 18911..19054 +
1680791087.4586468-CDS-D-mesarthrocarpus_Contig933:19348..199621680791087.4586468-CDS-D-mesarthrocarpus_Contig933:19348..19962Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig933 19349..19962 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig933.9.2prot_D-mesarthrocarpus_Contig933.9.2Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig933 14795..19962 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig933.9.2

>prot_D-mesarthrocarpus_Contig933.9.2 ID=prot_D-mesarthrocarpus_Contig933.9.2|Name=mRNA_D-mesarthrocarpus_Contig933.9.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=787bp
MRASVVLWAVGALSAATAQSTAMLEPTISWPEPNENATLKAKSPGTSKAG
DDIMMKFEYDDGMGGTAGKFFFNLFEGETCGPGGANNSQSRIAALCKDHN
AGGCESDNGEYNVTLPANLATGVYTVNIGYFGPHPRDCSPPFNVSAFGPP
VVLSNSTASDMCDATIPINVRYAGGTERIYLEHSLDSKGTPGSGGCATLS
LIYQTRMDVKTGVPKGPIYILDEKDEIDMTPFAPYTGKWYVEADIFVLDD
ITLEIVDEELRIESTETRFHNLRGHGGSLYFSGAVVTSWDLSVGGPREAY
DVGRSYISCISEMTGYGDCGGGLGVAKNDMGECRLDVLETEIGYLGWMDS
ESYGLTWKVRGFCVDKSNPEVFDEVNVYGDIIDSDIHHMYYGMYSYGHQG
GTWVRNKMHDNAQYGFDPHDDSDFLTISENDVYNNGNHGIIASKRCNDVE
ITNNYVHDGTGLIAAGIFLHRSSDRAVVSGNTVENMPDAGIAIMESFDLD
IFDNTFTNIKYGVRISVGGANNHIHDNTFETISQYGLYTYQGSDSPDTDS
DGRPKDNMFIDNEVLDCIVCMKIGEGDNNMFEGNTFEGRNIKFQFRNARE
TRFLTNTFPSNAEFSTTTSCFTDDSISEVSPTCTGDEPALLPPAPSPAND
EEEEEDVDDDDFGGDDDGITEDDEPNADDEDVMDAEDEPVNDDEVTADDE
DIMDAEDEPVNDDEVTADDEDITDAEDDEPVNDDEVTADDEDITDAEDDE
PVNDDEATADDATTTEEPTTDDEDTDAQTTDDEPTM*
back to top

mRNA from alignment at D-mesarthrocarpus_Contig933:14533..21261+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig933.9.2 ID=mRNA_D-mesarthrocarpus_Contig933.9.2|Name=mRNA_D-mesarthrocarpus_Contig933.9.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=6729bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig933:14533..21261+ (Discosporangium mesarthrocarpum MT17_79)
CTTCTTTTTTGAATTTGGAAGGGACAAAGAGGCCACAAGGACGAAACCGA ACAGTATCTCGTCTGCATCATGATGAGGACCTTGCCCTCCCTCGTCTACC GACCTGGACATCCTCACTCACTGATTACGCAGTCCGAATATCATCTGCAA CACACCTGAGACCTCCGCCTCGTTTCGTAGGCAAGTCCGTCAAGGTCTAG TCTTCGACAACTCACTTGAATAGGAATTGGGGCCAACCACCAGTGGCTTG TGGGTCGGCATCATGAGGGCAAGCGTGGTACTGTGGGCGGTGGGTGCCCT TTCCGCAGCTACAGCGCAGTCAACCGCGATGTAAGTGGTGCATGTACAAA ATTGGGGAAAGGGTTTCATCCTGTTGGTGTCCCATTCTTTGAGTTGTGTC TAACGACTGAGAGGAAGCGCGTAGCTTTCGCTGTTTCGGACTGCTCTTGA AAAACCTATCCGACATGTACCACAAGTCCGATTCCGATTCCAGCACCCTG TGGGCCTCAATCCCCCTTAATGCAGTTTTGTAATGTGACATGGTCATGAA CGGCTTGTTTTTATTCCGCGTTCTATACTCAGGCTGGAGCCCACTATTTC GTGGCCTGAGCCCAATGAGAACGCGACACTTAAAGCCAAGTCTCCTGGTA CTTCCAAGGCTGGTGATGACATCATGATGAAGTTCGAGTATGACGATGGT ATGGGAGGAACCGCCGGCAAGTTTTTCTTCAATCTTTTCGAGGGTGAGAC CTGTGGCCCAGGGGGTGCAAACAACAGCCAATCCCGAATCGCGGCCCTGT GCAAAGACCATAACGCCGGAGGGTGCGAATCGGACAACGGAGAATACAAC GTGACTCTTCCCGCCAATCTCGCCACTGGAGTATGTGAGTAGAGGGAAAG GAATCCCTGCGTTAATTATTGGTTTCACCTTGAAAGGTGTCCTTTGTCAC AGACTTGGTCTTAGAAATGATCTTTACATTTGATTAGGTATTACCCAATC AAACCAAAGTAGGAGTGGATAATTTGCCACATGTACCAATTGATGTGGTG AGACACGTTGATCACGCTTTCAAAGCTCTAACAGTCTTACTAACCACCCT GTTCCTCCAGACACAGTCAATATTGGGTATTTCGGGCCCCACCCCCGTGA CTGCTCCCCTCCTTTCAACGTCTCGGCATTTGGTCCCCCGGTGGTGCTGT CTAACTCCACTGCTTCGGACATGTGTGACGCCACCATTCCCATCAATGTG CGCTACGCTGGTGGGACTGAGCGCATCTGTGAGTGGAGTGCCCCTTAAGA GATTTCAACCACAAACACCAAGACCTCTGGAGTCAAGTTACAGCGATCAG TCCCTCTCCATGCGGTCAGCAAGGAAGCAAGCTATCCCTTTGCCAATCCT TAATTAATCTGTCCACACACATGTAGTTGCTTGCAAAAAGTGTGCTATAT ACCCTTTCTCGGCTGTCACTAACTGAGATAATAAACCCCAGGTATCTTGG TGCAGTGGGAGATACACCGAAATAGCAGGGGTGCCCTGCACAAGGTTGTG ATTACGAGCCTATTTCACTATGTTGCTTTGCACATCAAAGTCTGTACCTC AGTTGTCGTCCTTTTCCTATTCTCAATGTGCCCGTTTCAGACCTGGAGCA CTCGCTTGACAGCAAGGGCACCCCAGGCAGCGGGGGATGCGCCACGTTAA GCTTGATCTACCAGACACGCATGGATGTAAAAACTGGTGTGCCCAAGGGA CCCATCTACATTCTTGATGAGAAAGATGAGATCGACATGACTCCTTTTGC CCCCTACACTGGCAAGTGGTATGTTGAAGCTGACATCTTTGTCCTCGATG ACATTACTTTGGAGGTAAGGTGAAGGAAAAAACAGTGGTTCAATATGTTT TCCCAGTAAGATAAACTTTATAAAATGCATGACCTGTCACTTCATGTTGA CCTACTGTAGTACCTTGAACATCCATTGATGGCAGCCTGACTGATTTCAC GCTGTAACCTCGGCTGAACAGATTGTCGATGAGGAGCTGCGGATCGAATC CACGGAAACCAGGTTCCACAACCTACGTGGGCATGGTGGCTCCCTCTACT TTTCGGGTGCCGTGGTATGTACACGACCTGTTTTTTCTTTTGTTTGCAAG CCTGTGTGGTTGAAATCAAGGTGGCTGTGCGTCTCTTCCATATAGACAAC GACAGCGAAGGCTTACCCTAACCCCAACACCTGCACGACAGCAGGGAGTC ACACCGGTTGCGGGACCTTGCGTGCCCCTCTGCCCGCTTGCCCGGTGTAA TCGAGCCATTCCTTCCTTTCGCGGCTACGGGTACCCCCATGCTCCCTTCA GGTGACTTCGTGGGATCTATCGGTGGGAGGCCCCCGTGAGGCCTATGACG TCGGCCGCAGTTACATTAGCTGCATCAGCGAGATGACTGGGTATGGTGAC TGCGGTGGTGGCCTTGGCGTCGCCAAGAATGACATGGGTGAATGCCGCTT GGTGAGGCAGGCGTAACGGGTGAATTTTCCCACGTTCGATTTCTATGACC GTGAAGCACCGTGCGGGTTTCCCCTTTCTACTCCCTCCCGGCGTGTTAAT GTGGTACGTGCGGTCAGTCCAGCGCATGAAATGTGCTGATGCGGTTGTGC CCCTAAACCTGTGTATGTGTAGCTACCTTGCACATGGCAAGATTAGGTGC AATTGTTCACAAACTGTTTTCCTGTCATACCCTGTTGCTGATGGACAGGA TGTGCTGGAGACTGAGATAGGGTACCTTGGGTGGATGGACAGTGAGTCAT ACGGACTCACCTGGAAGGTCTGTGGTTCATCTTCAAACCTTCACTCTTTT TTTTGAAGTATCCTTTGCTGTGGCATGAATCTTGTAAACCAGTATGTGCT TCGTGCCTACCAAATTGCTTAGATTTTCTCGTAGCTTATTTCTATTTTGT TCATCTCCGCAATTCTTGTCTATAGTGCCATCCCACTTGATCTGTTTTGG AACTCCAGGTCCGCGGCTTCTGTGTGGACAAGTCAAACCCTGAGGTGTTT GATGAAGTCAATGTGTACGGTGACATCATCGACTCTGACATCCACCACAT GTGTGAGTGCAATTTTTTTTATGTAAAATCTTGTCTTTTGGCTTCCCGTC CAATTAGAGTAAGTACACATCATACGATCAATAAATACTACTATGCAGTT AGCACTAAAAACCCCTTGTTCCCTGTGGTTGCATTTTTAGTTGACCCTAA CCCCAACTGTATCACCCAAAAGTGTTTTTAGAGAATTTTCACCAAAATGG AGGACTAAACAGCTCTCACCCTGTTAATTTACAACTCCTACAGACTATGG TATGTATTCCTATGGTCACCAGGGTGGCACCTGGGTCCGCAACAAGATGC ACGGTGAGGATGTATACAAGTTCATTCCCGGGAGGTTCTTTCTGCCGTTA CTGGGGCTAGACAGAACCCTCCTGGGAAAAGCGTACCCACATTGCAATTT GTTATTGTCACCCCTGATGTCTACTGACACTGCCTCCCTCCTGCCTTTCT GAAGACAACGCGCAGTATGGCTTTGATCCCCATGACGACAGCGATTTCCT GACCATCTCTGAGAATGATGTCTACAACAACGGCAACCATGGAATCATTG CCTCTAAGCGGTGCAATGACGTGGAGATCACCAACAACTATGTCCACGAT GGTACCGGACTTATTGCTGCTGGTATCTTCCTCCACCGCAGCTCAGACAG GGCCGTTGTCAGTGGTGAGTGAGCCCAAGTATACATGATTATTTTCCCAT CGGAAACAGGGTAGGCAAATGCAACTAACCCCTGCTGTGACAACTCTTTG AAAGCATCATGTTCTAAACTCTGCTTCCTGTGCCATGGGTCTTGTTCCAC AACTTTATAGGGCCTTTCGATTTTGTGAAACAAAAGTAAAAGCATTTAGC AGCTTCACCGTAGAAGTCCTGTCCAGCATTTACCCTCCAAGTGCCTGTGT CTTTTGTCGTGGCTGGCAGGCAACACCGTTGAGAACATGCCCGATGCCGG GATTGCCATCATGGAGTCTTTCGACCTTGACATTTTCGACAACACCTTCA CGAACATCAAGTACGGCGTGCGCATCAGTGTGGGCGGTGCAAACAACCAC ATCCACGACAACACGTTTGAGACTATCTCTCAATGTAAGTCCAAACACCT GATGTGGTAGTTGGTACCAGGATAAAGGAAGGGACCACACCCAAAAATGT TCTTCTAATGGGCATCGAAGTTTTTACTGCCGAGCACACTAACTACCCAG TGCTCTGTTCCCTGTTAAAAAAAACTGCTTACTATAGGCATTCTGTCTTC CTTCCGAACTCGCGTTGGTCATATACAGATGGTTTATACACCTACCAGGG TTCTGACAGCCCTGATACAGACAGTGATGGGCGTCCAAAGGACAACATGT TCATCGACAACGAGGTGCTGGACTGCATCGTGTGCATGAAGATTGGGGAG GGAGACAACAATATGTTTGAAGGTCAGTGAATTAAGTGGTTTCTTGGTCG TGATTTACCACAAAATATGTTTCCCCGGGGAATCAGATCTAGGAGCACCT GTGAAAAGGGCGTATCTTTTTAATCGATGGAACCCACGGTGATGAGTCAC GTCCGTCGGTTGTCTGTTGCTCGGCTGAACGTGTGATAGCTCTGTACCAG CAAATATGTTTTTATTTGTCCACCAAACCTACTTGGTTGGTGCAAAGGTC TTTGTTTCCTCACTACTGTCACCCTCCTAATCCTTTGCAAAAACCTGTCC CTTCCAAAACTTGCAGGGAACACGTTCGAGGGTAGGAACATCAAGTTCCA GTTCCGGAATGCCAGAGAGACGAGATTCCTCACCAATACCTTCCCTTCAA ATGCAGAGTTCAGCACGACAACATCCTGTTTCACTGATGACTCAATTTCC GAGGTGTCCCCCACTTGCACTGGGGATGAACCCGCGCTACTCCCGCCGGC GCCATCCCCTGCTAATGACGAAGAGGAAGAGGAGGATGTCGATGATGACG ATTTTGGTGGGGATGATGACGGGATCACCGAGGATGATGAACCTAATGCA GACGACGAGGATGTCATGGATGCCGAGGATGAGCCTGTCAATGACGATGA GGTTACTGCGGATGACGAGGATATCATGGATGCCGAGGATGAGCCTGTCA ATGACGATGAGGTTACAGCGGATGACGAGGATATCACGGATGCTGAGGAT GATGAGCCTGTCAATGACGATGAGGTTACTGCGGATGACGAGGATATCAC GGATGCTGAGGATGATGAGCCTGTCAACGATGATGAGGCTACTGCGGATG ATGCAACTACCACGGAGGAACCTACGACGGACGATGAGGATACGGATGCT CAGACCACAGATGATGAGCCTACCATGTAGACCACGGACGGGGTGATCAC TGTTGACGATGAGACCACCGCGGAAGCCCGAGTAACAACGGAGACTGAGG CTATGGGTCCCAAGAGACAGCCGCGCAGTACGCAACTCAGATGGAAGTTG TAGACCGTAGTGATGAGAGAACCGTGGTTCGGCCTTAAATTCTGTGATGT TACTGTAACGAGGCGTTAGGTCGGATCACTTAGGTTTGTTTTTGGACTTT GGCTGCTTTGATCTGTACGCCCGCATGTAGCTTGCCCATGAACAATAAGA ACTGTTTAGGTCTTTCGACCGCCTCTACAGTATGTACACTTCTTGTATGT CGGGTGTTTTTGCGTCGCACGTTCCTTGTTTCAGTACTCGACCATGCACT TTCTTGTAACTATGGGTTTGATGGCCTTGTGTTTTGTTGCACAAACCTAA TAAAGCACACCTGATCCCTTAATTATGTGGTCCCACTTACTTGGGGTCAT TGTTTTTCTGTCGACATTACTGGTAGAGACTCTGCAACATAGTAGCGTAT TGCCTCGGTTCTTCGGTTGCATCAGTTATATATGTTTTTTGTTGACAGGA GATTGCTCTATTCAAATGGTGTTTTTCCTTACCTGTAAAAATAAATGTCT AGTAAGACAGATGGAAAAGAGGTGGGCACCAAATCCTGAATCTTCGGACC CGGTATCTCAGTAAAGTAATAGGAATGCCGACCAAAATATTCATACCATG CTCTGTGTTATGAATTTTGTTTGTCTACTTTTTCTTGTGTTCTCTAAATT TGTGCGTGAATTGATATGTGGCTTAACAGAAACTAGCACAATCATGAAGC CTTTCCAATAGTCCCTCCCGCACCCGTCTTGCTATAGTACGGAGTCAAGT TGCAAATCAATGGAAAGAGGAGATATATCTCTATGAATGTGCCAGTAATT GTTGGAGGTGATAGTCAGAAGGTACATGACACAAGGTATTATGAAGGCAC CAAGTGAAGAAAGGGAGGTGTTACGGATGAGGGTAAATAACACGGGTAAT GCAGAGGGGGAGGTAGTGGGGAGTGTAAAAGAAAGCACGGGCAACCCATA TATGTGAGAGTTTACGAGGAAATGCAATTCTATCTCTGTATACCCACATA CTGTGGGGCTCTGAGCAATGAATTTAATATACATGTGGGAAAAGCAAGGT GGAACAGGAAAGTAACGCTAAACCAACTCCAAGTAAAGCGAATTATATAC ACCCTTCCGTAGGAGAAAGGACATTAGAGAATGAATGATATAGTCAAATG ATCCCCTTAGAAGACATGCATGCAGGTGC
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig933:14533..21261+

>mRNA_D-mesarthrocarpus_Contig933.9.2 ID=mRNA_D-mesarthrocarpus_Contig933.9.2|Name=mRNA_D-mesarthrocarpus_Contig933.9.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=2361bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig933:14533..21261+ (Discosporangium mesarthrocarpum MT17_79)
ATGAGGGCAAGCGTGGTACTGTGGGCGGTGGGTGCCCTTTCCGCAGCTAC
AGCGCAGTCAACCGCGATGCTGGAGCCCACTATTTCGTGGCCTGAGCCCA
ATGAGAACGCGACACTTAAAGCCAAGTCTCCTGGTACTTCCAAGGCTGGT
GATGACATCATGATGAAGTTCGAGTATGACGATGGTATGGGAGGAACCGC
CGGCAAGTTTTTCTTCAATCTTTTCGAGGGTGAGACCTGTGGCCCAGGGG
GTGCAAACAACAGCCAATCCCGAATCGCGGCCCTGTGCAAAGACCATAAC
GCCGGAGGGTGCGAATCGGACAACGGAGAATACAACGTGACTCTTCCCGC
CAATCTCGCCACTGGAGTATACACAGTCAATATTGGGTATTTCGGGCCCC
ACCCCCGTGACTGCTCCCCTCCTTTCAACGTCTCGGCATTTGGTCCCCCG
GTGGTGCTGTCTAACTCCACTGCTTCGGACATGTGTGACGCCACCATTCC
CATCAATGTGCGCTACGCTGGTGGGACTGAGCGCATCTACCTGGAGCACT
CGCTTGACAGCAAGGGCACCCCAGGCAGCGGGGGATGCGCCACGTTAAGC
TTGATCTACCAGACACGCATGGATGTAAAAACTGGTGTGCCCAAGGGACC
CATCTACATTCTTGATGAGAAAGATGAGATCGACATGACTCCTTTTGCCC
CCTACACTGGCAAGTGGTATGTTGAAGCTGACATCTTTGTCCTCGATGAC
ATTACTTTGGAGATTGTCGATGAGGAGCTGCGGATCGAATCCACGGAAAC
CAGGTTCCACAACCTACGTGGGCATGGTGGCTCCCTCTACTTTTCGGGTG
CCGTGGTGACTTCGTGGGATCTATCGGTGGGAGGCCCCCGTGAGGCCTAT
GACGTCGGCCGCAGTTACATTAGCTGCATCAGCGAGATGACTGGGTATGG
TGACTGCGGTGGTGGCCTTGGCGTCGCCAAGAATGACATGGGTGAATGCC
GCTTGGATGTGCTGGAGACTGAGATAGGGTACCTTGGGTGGATGGACAGT
GAGTCATACGGACTCACCTGGAAGGTCCGCGGCTTCTGTGTGGACAAGTC
AAACCCTGAGGTGTTTGATGAAGTCAATGTGTACGGTGACATCATCGACT
CTGACATCCACCACATGTACTATGGTATGTATTCCTATGGTCACCAGGGT
GGCACCTGGGTCCGCAACAAGATGCACGACAACGCGCAGTATGGCTTTGA
TCCCCATGACGACAGCGATTTCCTGACCATCTCTGAGAATGATGTCTACA
ACAACGGCAACCATGGAATCATTGCCTCTAAGCGGTGCAATGACGTGGAG
ATCACCAACAACTATGTCCACGATGGTACCGGACTTATTGCTGCTGGTAT
CTTCCTCCACCGCAGCTCAGACAGGGCCGTTGTCAGTGGCAACACCGTTG
AGAACATGCCCGATGCCGGGATTGCCATCATGGAGTCTTTCGACCTTGAC
ATTTTCGACAACACCTTCACGAACATCAAGTACGGCGTGCGCATCAGTGT
GGGCGGTGCAAACAACCACATCCACGACAACACGTTTGAGACTATCTCTC
AATATGGTTTATACACCTACCAGGGTTCTGACAGCCCTGATACAGACAGT
GATGGGCGTCCAAAGGACAACATGTTCATCGACAACGAGGTGCTGGACTG
CATCGTGTGCATGAAGATTGGGGAGGGAGACAACAATATGTTTGAAGGGA
ACACGTTCGAGGGTAGGAACATCAAGTTCCAGTTCCGGAATGCCAGAGAG
ACGAGATTCCTCACCAATACCTTCCCTTCAAATGCAGAGTTCAGCACGAC
AACATCCTGTTTCACTGATGACTCAATTTCCGAGGTGTCCCCCACTTGCA
CTGGGGATGAACCCGCGCTACTCCCGCCGGCGCCATCCCCTGCTAATGAC
GAAGAGGAAGAGGAGGATGTCGATGATGACGATTTTGGTGGGGATGATGA
CGGGATCACCGAGGATGATGAACCTAATGCAGACGACGAGGATGTCATGG
ATGCCGAGGATGAGCCTGTCAATGACGATGAGGTTACTGCGGATGACGAG
GATATCATGGATGCCGAGGATGAGCCTGTCAATGACGATGAGGTTACAGC
GGATGACGAGGATATCACGGATGCTGAGGATGATGAGCCTGTCAATGACG
ATGAGGTTACTGCGGATGACGAGGATATCACGGATGCTGAGGATGATGAG
CCTGTCAACGATGATGAGGCTACTGCGGATGATGCAACTACCACGGAGGA
ACCTACGACGGACGATGAGGATACGGATGCTCAGACCACAGATGATGAGC
CTACCATGTAG
back to top