mRNA_D-mesarthrocarpus_Contig933.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig933.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig933.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig933.2.1 vs. uniprot
Match: D7FKN0_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKN0_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 2.560e-17
Identity = 43/60 (71.67%), Postives = 55/60 (91.67%), Query Frame = 1 
Query:    1 SLAVSARGIVVKSALALARESAASEVLGLWDHARRGYEKAALLLETLVLDALLVRPSPSG 180
            ++AVSAR IVV++ALA+A+ESAASEVLG+W+ AR+GYEKAALLLETL+LDAL+ RP  +G
Sbjct:  985 AVAVSARDIVVRAALAMAKESAASEVLGMWEAARKGYEKAALLLETLLLDALVARPETTG 1044
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig933.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKN0_ECTSI2.560e-1771.67Protein kinase domain-containing protein n=2 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig933contigD-mesarthrocarpus_Contig933:1436..2296 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FKN0
PFAMsDUF3543,Pkinase
Model size208
Max annot lvl2759|Eukaryota
KEGG koko:K08269,ko:K21358
KEGG Pathwayko04136,ko04138,ko04139,ko04140,ko04150,ko04212,map04136,map04138,map04139,map04140,map04150,map04212
Hectar predicted targeting categoryother localisation
Exons2
Evalue4.19e-18
EggNOG OGsKOG0595@1|root,KOG0595@2759|Eukaryota
Ec32 ortholog descriptionProtein kinase-like domain
Ec32 orthologEc-09_000840.1
EC2.7.11.1
Descriptionprotein serine/threonine kinase activity
Cds size204
COG categoryT
BRITEko00000,ko00001,ko01000,ko01001,ko03029,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791086.9724536-CDS-D-mesarthrocarpus_Contig933:1435..15521680791086.9724536-CDS-D-mesarthrocarpus_Contig933:1435..1552Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig933 1436..1552 +
1680791086.989517-CDS-D-mesarthrocarpus_Contig933:2207..22941680791086.989517-CDS-D-mesarthrocarpus_Contig933:2207..2294Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig933 2208..2294 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig933.2.1prot_D-mesarthrocarpus_Contig933.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig933 1436..2294 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig933.2.1

>prot_D-mesarthrocarpus_Contig933.2.1 ID=prot_D-mesarthrocarpus_Contig933.2.1|Name=mRNA_D-mesarthrocarpus_Contig933.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=68bp
SLAVSARGIVVKSALALARESAASEVLGLWDHARRGYEKAALLLETLVLD
ALLVRPSPSGLAFPAAGA
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mRNA from alignment at D-mesarthrocarpus_Contig933:1436..2296+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig933.2.1 ID=mRNA_D-mesarthrocarpus_Contig933.2.1|Name=mRNA_D-mesarthrocarpus_Contig933.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=861bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig933:1436..2296+ (Discosporangium mesarthrocarpum MT17_79)
TCTCTGGCGGTGTCGGCAAGGGGCATTGTGGTGAAGTCGGCTCTGGCGCT
CGCGAGGGAGTCTGCGGCCAGTGAGGTCCTGGGGCTGTGGGACCATGCCC
GCCGGGGCTATGAGAAGGTTGGGGGTTTCAGGGGTAATAATAGGCGTTTC
AGGGGTAATGGGGGTTTCAGGGGTAATAGGGGTTACAGGGGTTTGGGGTT
TGGGGGATGGGGTTAGGGTTAGGGCCAAGTGCGCAGCACTGACGGCACCT
TTTGGAGGGTGCTATATTCGCACTTTGTGCGTGTTTTGTGGGGGAAGGTA
GGCGGGGTGGGGGTAGTCAAGGTACAGGTAGGGTCTCAGGGGGGTGGGCG
AGGGGAGGGTAGTGGGTGGTTCCTGGTACTGGTGGCTTACATCAGTTTTC
GTGTGTGTGTCAGGTTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGC
GTGTTCTTCTTTTGCTTCTGTGCCTTTAGAGTGCCTTGACCCAGCCCTAA
CCATGACCCTGACCCTACTCTAACCCTAGCCCTAACCCACACCCCCCTCT
ATTCTGCTTGTCTTCTCTGGGCATGGGCCCTACCCTCTCTCAACGACAAG
AGCGCATTTCCATGCCCACCACCCACCCACTCACTCACCCACCCCCTTAT
CTATCTCTACCCACCTTACCCACCTCCACCCATCTCCCCACCCACCTCCC
AAACCACCCCTCCACACCCATCTCCCCGCACACCTGCACTTCCCCACCTT
AACCCCACCCACCTACCCGCAGGCCGCACTGCTTCTAGAAACCCTTGTAT
TAGATGCCCTGCTGGTTAGGCCATCACCCTCAGGGCTAGCGTTCCCTGCA
GCAGGGGCGGG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig933:1436..2296+

>mRNA_D-mesarthrocarpus_Contig933.2.1 ID=mRNA_D-mesarthrocarpus_Contig933.2.1|Name=mRNA_D-mesarthrocarpus_Contig933.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=204bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig933:1436..2296+ (Discosporangium mesarthrocarpum MT17_79)
TCTCTGGCGGTGTCGGCAAGGGGCATTGTGGTGAAGTCGGCTCTGGCGCT
CGCGAGGGAGTCTGCGGCCAGTGAGGTCCTGGGGCTGTGGGACCATGCCC
GCCGGGGCTATGAGAAGGCCGCACTGCTTCTAGAAACCCTTGTATTAGAT
GCCCTGCTGGTTAGGCCATCACCCTCAGGGCTAGCGTTCCCTGCAGCAGG
GGCG
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