mRNA_D-mesarthrocarpus_Contig9310.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9310.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9310.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9310.1.1 vs. uniprot
Match: D8LF76_ECTSI (Carbohydrate kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF76_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 9.490e-22
Identity = 66/132 (50.00%), Postives = 77/132 (58.33%), Query Frame = 1
Query:    1 ILPFFSGERSPGYDDMARAAIMGVCRSTTRAELLRAGLESVCLRLATIHLLFLMLLMPA----------------------------VVASGAALSASPVWRQMLADVLGMRVLSSEVTEETQLGVAMVLSA 312
            +LPFFSGERSPGY+D A A I G+ RSTTR +L+RAGLESVCLRLA I  L   L                                VV SG A +ASP WR+MLAD LG  V +S  TEET LGVA++LS+
Sbjct:  474 VLPFFSGERSPGYNDDATACIFGLRRSTTRPQLVRAGLESVCLRLAAIVDLMKDLTDGGSMKGSSSSEHEPEASSAGALVRDHEDAEVVTSGNAFAASPFWRKMLADSLGRTVRASGATEETSLGVAVILSS 605          
BLAST of mRNA_D-mesarthrocarpus_Contig9310.1.1 vs. uniprot
Match: A0A6H5L722_9PHAE (FGGY_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L722_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 3.410e-21
Identity = 65/132 (49.24%), Postives = 77/132 (58.33%), Query Frame = 1
Query:    1 ILPFFSGERSPGYDDMARAAIMGVCRSTTRAELLRAGLESVCLRLATIHLLFLMLLMPA----------------------------VVASGAALSASPVWRQMLADVLGMRVLSSEVTEETQLGVAMVLSA 312
            +LPFFSGERSPGY+D A A I G+ RSTTR +L+RAGLESVCLRLA I  L   L                                VV SG A +ASP WR++LAD LG  V +S  TEET LGVA++LS+
Sbjct:  989 VLPFFSGERSPGYNDDATACIFGLRRSTTRPQLVRAGLESVCLRLAVIVDLMKDLTDGGSMKGSSSNEHEPETFSAGALVRDHEDAEVVTSGNAFAASPFWRKILADSLGRTVRASGATEETSLGVAVILSS 1120          
BLAST of mRNA_D-mesarthrocarpus_Contig9310.1.1 vs. uniprot
Match: A0A024USG1_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024USG1_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.890e-17
Identity = 53/109 (48.62%), Postives = 72/109 (66.06%), Query Frame = 1
Query:    1 ILPFFSGERSPGYDDMARAAIMGVCRSTTRAELLRAGLESVCLRLATIHLLFLMLLMP--AVVASGAALSASPVWRQMLADVLGMRV-LSSEVTEETQLGVAMVLSAAL 318
            ILPF +GER+PG+ + A+  I G+  +TT   +LRA LESV LRL +I+ L    + P   ++ASG ALSASP WRQ++ADV+G  V L ++  E T  GVA +L A L
Sbjct:  375 ILPFLNGERAPGWHEDAKCTISGITAATTPVHILRAALESVALRLGSIYALLGDFVTPDAQLIASGTALSASPAWRQIIADVVGRSVWLETDAIELTSRGVATLLGAHL 483          
BLAST of mRNA_D-mesarthrocarpus_Contig9310.1.1 vs. uniprot
Match: A0A1Q3SXB7_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium 54-19 TaxID=1895928 RepID=A0A1Q3SXB7_9CHLR)

HSP 1 Score: 85.5 bits (210), Expect = 3.570e-17
Identity = 53/111 (47.75%), Postives = 71/111 (63.96%), Query Frame = 1
Query:    1 ILPFFSGERSPGYDDMARAAIMGVCRSTTRAELLRAGLESVCLRLATIHLLFLMLLMPA--VVASGAALSASPVWRQMLADVLGMRVLSSEVTEETQLGVAMVLSAALEEM 327
            +LPF +GERSPG++  ARAAI+G+   TT  E+LRAGLES+  R   +H +    L PA  ++ASG AL  SP W Q+LADVL   V +S   E T  G A++   ALE++
Sbjct:  347 VLPFLTGERSPGWNASARAAIVGLSLDTTPLEILRAGLESIAYRFGILHSIMADALPPALQIIASGGALLNSPTWMQILADVLNRPVTASAEGETTSRGAALL---ALEQL 454          
BLAST of mRNA_D-mesarthrocarpus_Contig9310.1.1 vs. uniprot
Match: W4HCV3_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HCV3_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 3.580e-17
Identity = 55/109 (50.46%), Postives = 70/109 (64.22%), Query Frame = 1
Query:    1 ILPFFSGERSPGYDDMARAAIMGVCRSTTRAELLRAGLESVCLRLATIHLLF--LMLLMPAVVASGAALSASPVWRQMLADVLGMRV-LSSEVTEETQLGVAMVLSAAL 318
            +LPF +GERSPG+ D A   I G+  +TT A +LRA LESV LRL  I+ L    +     +VASG ALS+SPVWRQ++ADV+G  V L +E  E T  GVAM +   L
Sbjct:  396 MLPFLNGERSPGWHDDATCTISGITAATTPAHILRAALESVALRLGAIYALLGEYVTSDAHLVASGTALSSSPVWRQIIADVVGRPVWLETEAVELTSRGVAMFVGGHL 504          
BLAST of mRNA_D-mesarthrocarpus_Contig9310.1.1 vs. uniprot
Match: A0A485KQ82_9STRA (Aste57867_10100 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQ82_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 6.660e-17
Identity = 52/109 (47.71%), Postives = 72/109 (66.06%), Query Frame = 1
Query:    1 ILPFFSGERSPGYDDMARAAIMGVCRSTTRAELLRAGLESVCLRLATIHLLFLMLLMP--AVVASGAALSASPVWRQMLADVLGMRV-LSSEVTEETQLGVAMVLSAAL 318
            ILPFF+GER+PG+ + A   I G+  STT   +LRA +ESV LRLATIH LF  +  P   +V+SG AL +SP+WRQ++AD +G  V + ++  E T  G+A+   A L
Sbjct:  395 ILPFFNGERAPGWHEDATCVISGIKISTTPVHMLRALMESVALRLATIHALFGNVASPNAVLVSSGTALGSSPLWRQIIADCIGRPVWIETDAIELTSRGIAIFTGAHL 503          
BLAST of mRNA_D-mesarthrocarpus_Contig9310.1.1 vs. uniprot
Match: A0A7V5YWR2_9CHLR (FGGY_C domain-containing protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7V5YWR2_9CHLR)

HSP 1 Score: 82.8 bits (203), Expect = 1.240e-16
Identity = 53/108 (49.07%), Postives = 67/108 (62.04%), Query Frame = 1
Query:    1 ILPFFSGERSPGYDDMARAAIMGVCRSTTRAELLRAGLESVCLRLATIHLLFLMLLMPA--VVASGAALSASPVWRQMLADVLGMRVLSSEVTEETQLGVAMVLSAAL 318
            +LPF +GERSPGY   A A I G+   T   E+LRAGLE+V  RLA I+ L   L  P   ++ASGAAL  SPVW Q++ADVLG  V  +   E T  G A++ + AL
Sbjct:  160 VLPFLAGERSPGYLPGATATISGLRWHTRPVEILRAGLEAVAYRLALIYELLRPLASPEAQIIASGAALVQSPVWTQIIADVLGRPVTITATPEATSRGAALLAAEAL 267          
BLAST of mRNA_D-mesarthrocarpus_Contig9310.1.1 vs. uniprot
Match: A0A484DUZ2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DUZ2_BRELC)

HSP 1 Score: 83.2 bits (204), Expect = 2.330e-16
Identity = 51/123 (41.46%), Postives = 76/123 (61.79%), Query Frame = 1
Query:    1 ILPFFSGERSPGYDDMARAAIMGVCRSTTRAELLRAGLESVCLRLATIH--LLFLMLLMP--------------AVVASGAALSASPVWRQMLADVLGMRV-LSSEVTEETQLGVAMVLSAAL 318
            +LPF SGER+PG+ + A  AI G+ + TT  E+LRAG+ES+ LR++ +   L+FL+ + P              A+V SG AL++S VWRQM+AD LG +V L +   E T  G+A+++   L
Sbjct:  390 VLPFLSGERTPGWSESATCAISGITKRTTPIEILRAGMESIALRISLLFSLLVFLLYIWPTNSHRVAFSADRDAAIVVSGTALTSSRVWRQMIADCLGKKVILEAGAIESTSRGLAVLIGTYL 512          
BLAST of mRNA_D-mesarthrocarpus_Contig9310.1.1 vs. uniprot
Match: H3HD73_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HD73_PHYRM)

HSP 1 Score: 83.2 bits (204), Expect = 2.430e-16
Identity = 50/109 (45.87%), Postives = 70/109 (64.22%), Query Frame = 1
Query:    1 ILPFFSGERSPGYDDMARAAIMGVCRSTTRAELLRAGLESVCLRLATIH--LLFLMLLMPAVVASGAALSASPVWRQMLADVLGMR-VLSSEVTEETQLGVAMVLSAAL 318
            +LPF SGER+PG+ + A   I G+ + TT  E LRAG+ES+ LR+  +   L F   L   VV SG AL++SPVWRQM+AD LG + +L +  TE T  G+A+++   L
Sbjct:  683 VLPFLSGERAPGWLENATCTITGINKWTTPIEFLRAGMESIALRIGVLFSLLAFSADLDATVVVSGTALTSSPVWRQMIADCLGKKLILEASATETTSRGLAVLIGTYL 791          
BLAST of mRNA_D-mesarthrocarpus_Contig9310.1.1 vs. uniprot
Match: A0A1F8NGE0_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium RBG_13_68_17 TaxID=1797638 RepID=A0A1F8NGE0_9CHLR)

HSP 1 Score: 82.0 bits (201), Expect = 5.710e-16
Identity = 52/108 (48.15%), Postives = 66/108 (61.11%), Query Frame = 1
Query:    1 ILPFFSGERSPGYDDMARAAIMGVCRSTTRAELLRAGLESVCLRLATI--HLLFLMLLMPAVVASGAALSASPVWRQMLADVLGMRVLSSEVTEETQLGVAMVLSAAL 318
            +LPF SGERSPG+   AR A  GV  STT  +LLRA LE+V LRLA +   L  L   + AVVA G A+S SP W QM+AD  G  + ++E  E T  GV ++   +L
Sbjct:  342 VLPFLSGERSPGWAGHARGAFQGVTVSTTALDLLRAALEAVALRLAIVFEELARLSGNVEAVVAGGGAISRSPAWLQMMADAFGRPISATETVETTCRGVGLLALESL 449          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9310.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF76_ECTSI9.490e-2250.00Carbohydrate kinase n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5L722_9PHAE3.410e-2149.24FGGY_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A024USG1_9STRA1.890e-1748.62Uncharacterized protein n=3 Tax=Aphanomyces invada... [more]
A0A1Q3SXB7_9CHLR3.570e-1747.75Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]
W4HCV3_9STRA3.580e-1750.46Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
A0A485KQ82_9STRA6.660e-1747.71Aste57867_10100 protein n=1 Tax=Aphanomyces stella... [more]
A0A7V5YWR2_9CHLR1.240e-1649.07FGGY_C domain-containing protein n=1 Tax=Anaerolin... [more]
A0A484DUZ2_BRELC2.330e-1641.46Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
H3HD73_PHYRM2.430e-1645.87Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A1F8NGE0_9CHLR5.710e-1648.15Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9310contigD-mesarthrocarpus_Contig9310:58..708 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LF76
PFAMsFGGY_C,FGGY_N
Model size327
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00017
KEGG koko:K00851
KEGG ReactionR01737
KEGG Pathwayko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200
Hectar predicted targeting categorysignal anchor
Exons3
Evalue1.56e-22
EggNOG OGsCOG0554@1|root,KOG2517@2759|Eukaryota
Ec32 ortholog descriptioncarbohydrate kinase
Ec32 orthologEc-06_001950.1
EC2.7.1.12
Descriptionglycerol kinase activity
Cds size327
COG categoryC
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791085.9945493-CDS-D-mesarthrocarpus_Contig9310:57..2011680791085.9945493-CDS-D-mesarthrocarpus_Contig9310:57..201Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9310 58..201 +
1680791086.0075834-CDS-D-mesarthrocarpus_Contig9310:304..3301680791086.0075834-CDS-D-mesarthrocarpus_Contig9310:304..330Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9310 305..330 +
1680791086.0245798-CDS-D-mesarthrocarpus_Contig9310:551..7081680791086.0245798-CDS-D-mesarthrocarpus_Contig9310:551..708Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9310 552..708 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9310.1.1prot_D-mesarthrocarpus_Contig9310.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9310 58..708 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9310.1.1

>prot_D-mesarthrocarpus_Contig9310.1.1 ID=prot_D-mesarthrocarpus_Contig9310.1.1|Name=mRNA_D-mesarthrocarpus_Contig9310.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=109bp
ILPFFSGERSPGYDDMARAAIMGVCRSTTRAELLRAGLESVCLRLATIHL
LFLMLLMPAVVASGAALSASPVWRQMLADVLGMRVLSSEVTEETQLGVAM
VLSAALEEM
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mRNA from alignment at D-mesarthrocarpus_Contig9310:58..708+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9310.1.1 ID=mRNA_D-mesarthrocarpus_Contig9310.1.1|Name=mRNA_D-mesarthrocarpus_Contig9310.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=651bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9310:58..708+ (Discosporangium mesarthrocarpum MT17_79)
ATCCTGCCCTTCTTTTCAGGGGAGCGGTCTCCAGGATATGATGACATGGC ACGAGCAGCCATCATGGGGGTGTGTCGCTCAACTACCAGGGCGGAACTCC TCCGGGCCGGCCTAGAATCGGTCTGCCTCCGCCTGGCTACAATAGTGAGC CTCATCACCTCCATCTCCACCTCAGCCTCCACTTCCTCCTACCCCCACCC CTCCATCCTGAAGCCCTCCTCCTCCCCCCTCCCTGCCGGCTGCATAGCAT CTGCTATTCCTGATGCTACTGATGTCGCCGGCAGGGGGGGGGGGTGTCCC TCCTTGGTCTCTGCGCAACCCCCTTGTGAGGCAGGAGGCACACCCACCAC CACCACTACCACACTCTCTTCCCCTGTCTGCAAGGAGGCAGCCCCTTCAC CCCAACCCCCAGGGCCCGATGAAATAGCAATGGCTTCTTCTTCCTCGGGG TTGTTAGGGAGACAAGGGGGGGGGGAAGGGCAGTGGCAGTGCAGGCCGGC CGTGGTGGCAAGTGGGGCAGCACTGTCGGCATCTCCTGTCTGGCGGCAGA TGCTGGCAGATGTACTGGGGATGAGGGTGTTGTCCTCCGAGGTGACAGAG GAGACACAGCTGGGGGTGGCCATGGTGCTCTCTGCGGCATTGGAAGAGAT G
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9310:58..708+

>mRNA_D-mesarthrocarpus_Contig9310.1.1 ID=mRNA_D-mesarthrocarpus_Contig9310.1.1|Name=mRNA_D-mesarthrocarpus_Contig9310.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=327bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9310:58..708+ (Discosporangium mesarthrocarpum MT17_79)
ATCCTGCCCTTCTTTTCAGGGGAGCGGTCTCCAGGATATGATGACATGGC
ACGAGCAGCCATCATGGGGGTGTGTCGCTCAACTACCAGGGCGGAACTCC
TCCGGGCCGGCCTAGAATCGGTCTGCCTCCGCCTGGCTACAATACATCTG
CTATTCCTGATGCTACTGATGCCGGCCGTGGTGGCAAGTGGGGCAGCACT
GTCGGCATCTCCTGTCTGGCGGCAGATGCTGGCAGATGTACTGGGGATGA
GGGTGTTGTCCTCCGAGGTGACAGAGGAGACACAGCTGGGGGTGGCCATG
GTGCTCTCTGCGGCATTGGAAGAGATG
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