mRNA_D-mesarthrocarpus_Contig93.20.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig93.20.1
Unique NamemRNA_D-mesarthrocarpus_Contig93.20.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig93.20.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig93contigD-mesarthrocarpus_Contig93:50215..51156 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size365
Hectar predicted targeting categoryother localisation
Exons3
Cds size363
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791083.8042228-CDS-D-mesarthrocarpus_Contig93:50216..503331680791083.8042228-CDS-D-mesarthrocarpus_Contig93:50216..50333Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig93 50217..50333 -
1680791083.8154247-CDS-D-mesarthrocarpus_Contig93:50673..507991680791083.8154247-CDS-D-mesarthrocarpus_Contig93:50673..50799Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig93 50674..50799 -
1680791083.8351693-CDS-D-mesarthrocarpus_Contig93:51036..511561680791083.8351693-CDS-D-mesarthrocarpus_Contig93:51036..51156Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig93 51037..51156 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig93.20.1prot_D-mesarthrocarpus_Contig93.20.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig93 50217..51156 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig93.20.1

>prot_D-mesarthrocarpus_Contig93.20.1 ID=prot_D-mesarthrocarpus_Contig93.20.1|Name=mRNA_D-mesarthrocarpus_Contig93.20.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=121bp
QKIKGLEREIAAHKREIKARDDTIGEKEKKIYELKKKNQELEKFKFVLDY
KIKELKRQIEPREMEIGNMKEQIKDMDKELEQFHNSNAQLDLLIGELRGK
LDLMQAQILDQRKRIADQEAT
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mRNA from alignment at D-mesarthrocarpus_Contig93:50215..51156-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig93.20.1 ID=mRNA_D-mesarthrocarpus_Contig93.20.1|Name=mRNA_D-mesarthrocarpus_Contig93.20.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=942bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig93:50215..51156- (Discosporangium mesarthrocarpum MT17_79)
CAGAAAATTAAGGGGCTTGAGCGGGAGATTGCTGCACACAAAAGGGAGAT
CAAGGCTCGTGATGACACTATTGGTGAAAAGGAGAAGAAGATCTACGAGC
TAAAGAAGAAGAACCAAGAGGTGATGATGCACCATAAAGCTACTTGTAGA
CACAATGGTTTTTTGTTCTGGTTGATAGTTATGTATTCTTTTCTGGGTAA
TAAATTTGTTTTTCTGGGTAGTAACTTTTTTCCGTGATTCAGGTAAAACA
GACCAATCAATCCCCTCATGAACAATCATTTAGGTGACACATGCTTCATA
GTAGGGATTGATGTGAGGTCATAATAACACGCGATCTCCAACTGTTTGTT
TTCTCAGCTGGAGAAGTTCAAGTTCGTCTTGGACTACAAGATCAAGGAGT
TGAAACGTCAAATTGAGCCCCGAGAGATGGAGATTGGAAACATGAAGGAG
CAGATCAAGGACATGGACAAAGAACTTGAACAGGTGTTGATTGATGTCAC
ATTTCAAATTGGATAAAAGTGGAATGCAGGGTCTTGCCCCTGGTGTTATT
TTACGTGCAAATATTTTTTTTATTTTAATCATCCAATCCCTTCGCCTTTA
AAATAAAAAAATATTTTGCTACACCCCTAGCGTTGGTAAGTGGCATGTGA
AAATGTGGTGGCAGACATCTGCGACACGAACAGCTTCCAAAGCCTGGCTA
GGGCTTACACATACTTGGGAGGGTTTTTGCCACCAGGTCCAACTCTTTGC
AGGGTCATTTATTGCCTGTTGAACAACTCAGCAAAGCAACATGTTGCATT
TCCTTCCATTCTGGTGTCCACAGTTTCACAACAGCAATGCACAACTGGAT
TTGCTCATTGGGGAGCTACGTGGAAAGCTGGACTTGATGCAAGCACAAAT
CTTGGACCAAAGAAAGCGCATTGCTGACCAGGAGGCCACCAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig93:50215..51156-

>mRNA_D-mesarthrocarpus_Contig93.20.1 ID=mRNA_D-mesarthrocarpus_Contig93.20.1|Name=mRNA_D-mesarthrocarpus_Contig93.20.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=363bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig93:50215..51156- (Discosporangium mesarthrocarpum MT17_79)
CAGAAAATTAAGGGGCTTGAGCGGGAGATTGCTGCACACAAAAGGGAGAT
CAAGGCTCGTGATGACACTATTGGTGAAAAGGAGAAGAAGATCTACGAGC
TAAAGAAGAAGAACCAAGAGCTGGAGAAGTTCAAGTTCGTCTTGGACTAC
AAGATCAAGGAGTTGAAACGTCAAATTGAGCCCCGAGAGATGGAGATTGG
AAACATGAAGGAGCAGATCAAGGACATGGACAAAGAACTTGAACAGTTTC
ACAACAGCAATGCACAACTGGATTTGCTCATTGGGGAGCTACGTGGAAAG
CTGGACTTGATGCAAGCACAAATCTTGGACCAAAGAAAGCGCATTGCTGA
CCAGGAGGCCACC
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