mRNA_D-mesarthrocarpus_Contig93.11.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig93.11.1
Unique NamemRNA_D-mesarthrocarpus_Contig93.11.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig93.11.1 vs. uniprot
Match: A0A6H5KLY6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLY6_9PHAE)

HSP 1 Score: 335 bits (858), Expect = 2.440e-102
Identity = 168/339 (49.56%), Postives = 213/339 (62.83%), Query Frame = 3 
Query:  231 GIQRSRFFVTSPDSCLGSALTFDWGSAYTEEAVEAFRACPFFQSHGVRHLCNRLCYLHAYEPCRKWHTLRRAVVDSGGSSRLLDQWAVRIGKGRDPERSGTKAVPWRISYVSPHGEEYSSVSRVLKILGLADSPSAEVSGESMLKSQGRHVEIA-------------RPEGPSFLLKEGAEAGDKNFPYSPFGLIEEMLTDDPWRLLLSCIMLNQTTRSQVDPVLVKFLARFPDAPSVLKGSLDEVAAIVAPLGLQEKRPRAIIRFSDEYLNKPWQTPTELHWVGKYGADAYKIFINREWKDIQASDHALNWWVEWKQGVE-----CQALSRPAPVKDT 1193
            G +RS +F ++PDSC GSA +FDWGSA+TE+A  A ++C  F+  GVRH+C   CY  AYEP RKWH LR AV   G S+ +L  W V++ +G+  E S      WRI YV+P G  +  V  VLK LGL    S   +    L+ + R    +              P G ++LLK    AG   FP SPFGLIEE+LTDDPW+LL+ CIMLNQTTRSQ+DPVLV+FL +FP A      S+DE+  +VAPLGLQE+RP AIIRFS EYL+K W    EL+WVGKY ADA+KIFI R+W+++Q  DHALNWWVEW +G +       A  R  P  + 
Sbjct:   59 GERRSEYFTSTPDSCAGSASSFDWGSAFTEKAFFALKSCEHFEHTGVRHMCKNRCYFRAYEPVRKWHALRLAVARVGASTGVLTGWCVQMDRGQTAEDS------WRIRYVAPDGSVFPCVKPVLKALGLGHGVSGYPTSPPSLRRKSRTPTTSPQPLPAACATIRHHPNGSAYLLKN-PRAG--TFPPSPFGLIEELLTDDPWKLLIGCIMLNQTTRSQMDPVLVRFLEKFPTADVAAAASVDEMTRVVAPLGLQERRPIAIIRFSQEYLSKAWTNVKELYWVGKYAADAHKIFIERKWREVQPDDHALNWWVEWMRGAQQAEEPLSAAERSVPALEV 388
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BLAST of mRNA_D-mesarthrocarpus_Contig93.11.1 vs. uniprot
Match: A0A5B8MSN9_9CHLO (DNA glycosylase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MSN9_9CHLO)

HSP 1 Score: 160 bits (404), Expect = 2.550e-38
Identity = 98/285 (34.39%), Postives = 145/285 (50.88%), Query Frame = 3 
Query:  345 CPFFQSHG-VRHLCNRLCYLHAYEPCRK---------WHTLRRAVVDSGGSSRLLDQWAVRIGKGRDPERSGTKAVPWRISYVSPHGEEYSSVSRVLKILGLADSPSAEVSG--ESMLKSQ--GRHVEIARPEGPSFLLKEGAEAGDKNFPYSPFGLIEEMLTDDPWRLLLSCIMLNQTTRSQVDPVLVKFLARFPDAPSVLKGS--LDEVAAIVAPLGLQEKRPRAIIRFSDEYLNKPWQTPTELHWVGKYGADAYKIF-INREWKDIQASDHALNWWVEWKQG 1148
            CP     G  RHLC   C+   +EP RK         WH   +A  +S     L   W+ R+   R    +G K V      VSP G  ++   + L+ +G+A  P  +++   E  ++ +  G   E+    GP                +SP+GLIEE+  + PW+LL+ C++LNQTTR Q+D  L+ F  RFP   S+L  S   +E+   ++P GLQ KR   +++F+ E+L K W  P ELH VG Y  +AY+IF + +   +I   DHALNW+VE+K G
Sbjct:  208 CPMLCETGDCRHLCEHRCFFREHEPARKLKEFRDSCEWHAGSKAEAES-----LFSGWSSRLEVCRS---NGFKVV-----LVSPQGVSHNHSKKALESIGIAMDPKYKITSLYEKKIRDRVSGNATEVVMCHGPR---------------HSPYGLIEELFWECPWKLLVCCLLLNQTTRKQLDIALLHFFERFPTPESLLSCSERQNEIEGAISPCGLQRKRTATLLKFTKEFLEKDWVEPRELHGVGAYAQEAYEIFCLGKLNPNIPVPDHALNWYVEYKLG 464
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BLAST of mRNA_D-mesarthrocarpus_Contig93.11.1 vs. uniprot
Match: A0A835Z3C1_9STRA (DNA glycosylase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3C1_9STRA)

HSP 1 Score: 145 bits (365), Expect = 7.370e-37
Identity = 67/129 (51.94%), Postives = 89/129 (68.99%), Query Frame = 3 
Query:  753 PYSPFGLIEEMLTDDPWRLLLSCIMLNQTTRSQVDPVLVKFLARFPDAPSVLKGSLDEVAAIVAPLGLQEKRPRAIIRFSDEYLNKPWQTPTELHWVGKYGADAYKIFINREWKDIQASDHALNWWVEW 1139
            P SPFGL+EE+L  DPWRLL++CIMLNQT+R QVDPVL +FL   P   S  K     +A ++ PLGL +KRP A++RFS EYL   W++   LHWVG+YG DAY IF+ ++W+ +   D  L  +V+W
Sbjct:    2 PLSPFGLLEELLWYDPWRLLMACIMLNQTSRRQVDPVLAQFLDTHPTPESAAKADPTALAPMLKPLGLNKKRPVAVVRFSREYL--AWRSGRALHWVGQYGVDAYDIFVLQKWETVTPDDSVLRCYVDW 128
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BLAST of mRNA_D-mesarthrocarpus_Contig93.11.1 vs. uniprot
Match: V4B746_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4B746_LOTGI)

HSP 1 Score: 143 bits (361), Expect = 5.540e-36
Identity = 65/129 (50.39%), Postives = 88/129 (68.22%), Query Frame = 3 
Query:  753 PYSPFGLIEEMLTDDPWRLLLSCIMLNQTTRSQVDPVLVKFLARFPDAPSVLKGSLDEVAAIVAPLGLQEKRPRAIIRFSDEYLNKPWQTPTELHWVGKYGADAYKIFINREWKDIQASDHALNWWVEW 1139
            P SPF LI+E L  DPW+LL++ I LN+TT +   P+L KF  R+P A S   GS ++++ ++ PLGL EKR   IIRFSDEYL K W  P ELH +GKYG D+Y+IF   EW+ ++ +DH LN + +W
Sbjct:   15 PKSPFNLIQESLFHDPWKLLIATIFLNKTTGTAAIPLLWKFFNRWPTADSARNGSAEKMSKLMQPLGLHEKRAETIIRFSDEYLTKKWTYPNELHGIGKYGNDSYRIFCVNEWRQVKPTDHKLNDYHDW 143
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BLAST of mRNA_D-mesarthrocarpus_Contig93.11.1 vs. uniprot
Match: R1BD03_EMIHU (ENDO3c domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BD03_EMIHU)

HSP 1 Score: 152 bits (385), Expect = 9.700e-36
Identity = 98/292 (33.56%), Postives = 134/292 (45.89%), Query Frame = 3 
Query:  342 ACPFFQSHGVRHLCNRLCYLHAYEPCRKWHTLRRAVVDSGGSSRLLDQWAV-RIGKGRDPERSGTKA-------------------------VPWRISYVSPHGEEYSSVSRVLKILGLADSPSAEVSGESMLKSQGRHVEIARPEGPSFLLKEGAEAGDKNFPYSPFGLIEEMLTDDPWRLLLSCIMLNQTTRSQVDPVLVKFLARFPDAPSVLKGSLDEVAAIVAPLGLQEKRPRAIIRFSDEYLNKPWQTPTELHWVGKYGADAYKIFINREWKDIQASDHALNWWVEW 1139
            +CP     G RHLC   C+  A+EP R+  +LR A+   G +   LD W V R+  G     S  +                            W   +VSP G  ++SV   ++    AD  S   SGE             R  GP  L      A  ++   +  GL  E+L D PW LLL+CI+LNQTTR QVDPV+ + L  FPDAPS+ +     V  I+ PLGL  +R R+++ FS  ++   W     L  VGKYG DA+ IF    +++ Q  D AL W+  W
Sbjct:  202 SCPLLSRCGPRHLCAYGCFFDAFEPARRLQSLRAALEARGATGACLDGWRVERVRSGAGASSSPARGDGAEGGKXXXXXXXXXXXXXXXXXXXSWH--FVSPSGATFASVGAAVR--AFADG-SPSTSGE-------------RQGGPRGLEARSVSAESED---AAAGLRRELLWDRPWALLLACILLNQTTRRQVDPVMARLLDAFPDAPSLAEAEPGAVEPILRPLGLHRQRSRSVVAFSAAFVAGGWARADALPGVGKYGRDAHAIFCEGRYRETQPEDFALRWYRSW 472
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig93.11.1 vs. uniprot
Match: A0A0L8GVZ4_OCTBM (Uncharacterized protein n=1 Tax=Octopus bimaculoides TaxID=37653 RepID=A0A0L8GVZ4_OCTBM)

HSP 1 Score: 139 bits (351), Expect = 2.800e-33
Identity = 64/129 (49.61%), Postives = 86/129 (66.67%), Query Frame = 3 
Query:  753 PYSPFGLIEEMLTDDPWRLLLSCIMLNQTTRSQVDPVLVKFLARFPDAPSVLKGSLDEVAAIVAPLGLQEKRPRAIIRFSDEYLNKPWQTPTELHWVGKYGADAYKIFINREWKDIQASDHALNWWVEW 1139
            P SPF L++E L  DPW+LL++ I LN+TT     P+L KF   +PDA S  K    E+A ++ PLGL EKR + IIRFS+EYL K W+ P EL+ +GKYG D+Y+IF   EWK +  +DH LN + +W
Sbjct:  124 PKSPFCLVQESLFHDPWKLLIATIFLNKTTGKAAIPLLWKFFDLYPDADSARKADWQEIARLITPLGLNEKRSKIIIRFSEEYLLKNWKYPDELYGIGKYGKDSYRIFCINEWKQVIPTDHKLNNYYKW 252
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BLAST of mRNA_D-mesarthrocarpus_Contig93.11.1 vs. uniprot
Match: A7RR45_NEMVE (Predicted protein (Fragment) n=3 Tax=Nematostella vectensis TaxID=45351 RepID=A7RR45_NEMVE)

HSP 1 Score: 135 bits (339), Expect = 3.740e-33
Identity = 59/138 (42.75%), Postives = 90/138 (65.22%), Query Frame = 3 
Query:  753 PYSPFGLIEEMLTDDPWRLLLSCIMLNQTTRSQVDPVLVKFLARFPDAPSVLKGSLDEVAAIVAPLGLQEKRPRAIIRFSDEYLNKPWQTPTELHWVGKYGADAYKIFINREWKDIQASDHALNWWVEWKQGVECQAL 1166
            P SPF L++E L  DPW+LL+S I LN+T  +Q  P++ +F  R+PDA    K     ++ ++ PLGL EKR +A+++FS E+L++ W  P  L+ +GKYG+D+Y+IF   EWKD++  DH LN + +W    E + L
Sbjct:    5 PKSPFSLVQETLFHDPWKLLVSSIFLNRTAGTQAIPIMWEFFRRYPDAAEASKADPGPISDLLRPLGLHEKRAKALVQFSAEFLSRDWIYPDTLYGIGKYGSDSYRIFFLGEWKDVKPEDHKLNLYHDWLWKQEREGL 142
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BLAST of mRNA_D-mesarthrocarpus_Contig93.11.1 vs. uniprot
Match: A0A091S1A7_NESNO (Methyl-CpG-binding domain protein 4 (Fragment) n=2 Tax=Nestor notabilis TaxID=176057 RepID=A0A091S1A7_NESNO)

HSP 1 Score: 136 bits (342), Expect = 4.650e-33
Identity = 62/129 (48.06%), Postives = 84/129 (65.12%), Query Frame = 3 
Query:  753 PYSPFGLIEEMLTDDPWRLLLSCIMLNQTTRSQVDPVLVKFLARFPDAPSVLKGSLDEVAAIVAPLGLQEKRPRAIIRFSDEYLNKPWQTPTELHWVGKYGADAYKIFINREWKDIQASDHALNWWVEW 1139
            P SPF LI+E L  DPW+LL++ I LN+T+     PVL KFL ++P           E++ ++ PLGL E R + II+FSDEYL+K W+ P ELH +GKYG D+Y+IF   EWK++Q  DH LN +  W
Sbjct:   43 PRSPFNLIQETLFHDPWKLLIATIFLNKTSGKMAIPVLWKFLKKYPSPEITRTADWKEMSELLKPLGLYELRAKTIIKFSDEYLSKQWKYPIELHGIGKYGNDSYRIFCVNEWKEVQPQDHKLNVYHTW 171
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BLAST of mRNA_D-mesarthrocarpus_Contig93.11.1 vs. uniprot
Match: A0A7L4GUX6_PODST (MBD4 protein (Fragment) n=1 Tax=Podargus strigoides TaxID=8905 RepID=A0A7L4GUX6_PODST)

HSP 1 Score: 136 bits (342), Expect = 4.790e-33
Identity = 62/129 (48.06%), Postives = 84/129 (65.12%), Query Frame = 3 
Query:  753 PYSPFGLIEEMLTDDPWRLLLSCIMLNQTTRSQVDPVLVKFLARFPDAPSVLKGSLDEVAAIVAPLGLQEKRPRAIIRFSDEYLNKPWQTPTELHWVGKYGADAYKIFINREWKDIQASDHALNWWVEW 1139
            P SPF LI+E L  DPW+LL++ I LN+T+     PVL +FL R+P           E++ ++ PLGL E R + I+RFSDEYL+K W+ P ELH +GKYG D+Y+IF   EWK++Q  DH LN +  W
Sbjct:   43 PRSPFNLIQETLFHDPWKLLIATIFLNKTSGKMAIPVLWEFLKRYPSPEITRAADWKEMSELLKPLGLYELRAKTIVRFSDEYLSKRWKYPIELHGIGKYGNDSYRIFCVNEWKEVQPEDHKLNVYHTW 171
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig93.11.1 vs. uniprot
Match: A0A091GSD2_BUCRH (Methyl-CpG-binding domain protein 4 (Fragment) n=2 Tax=Buceros rhinoceros silvestris TaxID=175836 RepID=A0A091GSD2_BUCRH)

HSP 1 Score: 135 bits (341), Expect = 5.970e-33
Identity = 61/129 (47.29%), Postives = 85/129 (65.89%), Query Frame = 3 
Query:  753 PYSPFGLIEEMLTDDPWRLLLSCIMLNQTTRSQVDPVLVKFLARFPDAPSVLKGSLDEVAAIVAPLGLQEKRPRAIIRFSDEYLNKPWQTPTELHWVGKYGADAYKIFINREWKDIQASDHALNWWVEW 1139
            P SPF L++E L  DPW+LL++ I LN+T+     PVL +FL ++P   +       E+A ++ PLGL E R + IIRFSDEYL+K W+ P ELH +GKYG D+Y+IF   EW+++Q  DH LN +  W
Sbjct:   41 PRSPFNLVQETLFHDPWKLLIATIFLNKTSGKMAIPVLWQFLRKYPSPETARAADWREMARLLRPLGLYELRAKTIIRFSDEYLSKRWRYPIELHGIGKYGNDSYRIFCVNEWREVQPQDHKLNVYHTW 169
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig93.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLY6_9PHAE2.440e-10249.56Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A5B8MSN9_9CHLO2.550e-3834.39DNA glycosylase n=1 Tax=Chloropicon primus TaxID=1... [more]
A0A835Z3C1_9STRA7.370e-3751.94DNA glycosylase (Fragment) n=1 Tax=Tribonema minus... [more]
V4B746_LOTGI5.540e-3650.39Uncharacterized protein n=1 Tax=Lottia gigantea Ta... [more]
R1BD03_EMIHU9.700e-3633.56ENDO3c domain-containing protein n=1 Tax=Emiliania... [more]
A0A0L8GVZ4_OCTBM2.800e-3349.61Uncharacterized protein n=1 Tax=Octopus bimaculoid... [more]
A7RR45_NEMVE3.740e-3342.75Predicted protein (Fragment) n=3 Tax=Nematostella ... [more]
A0A091S1A7_NESNO4.650e-3348.06Methyl-CpG-binding domain protein 4 (Fragment) n=2... [more]
A0A7L4GUX6_PODST4.790e-3348.06MBD4 protein (Fragment) n=1 Tax=Podargus strigoide... [more]
A0A091GSD2_BUCRH5.970e-3347.29Methyl-CpG-binding domain protein 4 (Fragment) n=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig93contigD-mesarthrocarpus_Contig93:29730..34484 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FKJ0
Preferred nameMBD4
PFAMsHhH-GPD,MBD
Model size2895
Max annot lvl2759|Eukaryota
KEGG koko:K10801
KEGG Pathwayko03410,map03410
Hectar predicted targeting categoryother localisation
GOsGO:0000075,GO:0000077,GO:0000278,GO:0000700,GO:0000785,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003696,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0006139,GO:0006220,GO:0006244,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006304,GO:0006305,GO:0006306,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006974,GO:0007049,GO:0007093,GO:0007095,GO:0007154,GO:0007165,GO:0007346,GO:0008150,GO:0008152,GO:0008219,GO:0008263,GO:0008630,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009219,GO:0009223,GO:0009262,GO:0009264,GO:0009314,GO:0009394,GO:0009628,GO:0009987,GO:0010389,GO:0010564,GO:0010948,GO:0010972,GO:0012501,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016798,GO:0016799,GO:0018130,GO:0019104,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0022402,GO:0023052,GO:0031570,GO:0031572,GO:0031974,GO:0031981,GO:0032259,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035556,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0043565,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044728,GO:0044773,GO:0044774,GO:0044818,GO:0045008,GO:0045786,GO:0045930,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051726,GO:0055086,GO:0065007,GO:0070013,GO:0071704,GO:0072527,GO:0072529,GO:0090304,GO:0090305,GO:0097159,GO:0097190,GO:0097193,GO:0140097,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902749,GO:1902750,GO:1903047,GO:1990837
Exons6
Evalue4.76e-107
EggNOG OGsKOG4161@1|root,KOG4161@2759|Eukaryota
Descriptiondomain protein
Cds size1152
COG categoryS
BRITEko00000,ko00001,ko01000,ko03036,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig93.11.1prot_D-mesarthrocarpus_Contig93.11.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig93 31749..34431 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791084.5694106-UTR-D-mesarthrocarpus_Contig93:29729..306931680791084.5694106-UTR-D-mesarthrocarpus_Contig93:29729..30693Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig93 29730..30693 -
1680791084.5815535-UTR-D-mesarthrocarpus_Contig93:31022..317481680791084.5815535-UTR-D-mesarthrocarpus_Contig93:31022..31748Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig93 31023..31748 -
1680791084.6684644-UTR-D-mesarthrocarpus_Contig93:34431..344841680791084.6684644-UTR-D-mesarthrocarpus_Contig93:34431..34484Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig93 34432..34484 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791084.5988336-CDS-D-mesarthrocarpus_Contig93:31748..319601680791084.5988336-CDS-D-mesarthrocarpus_Contig93:31748..31960Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig93 31749..31960 -
1680791084.6089149-CDS-D-mesarthrocarpus_Contig93:32318..324601680791084.6089149-CDS-D-mesarthrocarpus_Contig93:32318..32460Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig93 32319..32460 -
1680791084.6210873-CDS-D-mesarthrocarpus_Contig93:33136..334151680791084.6210873-CDS-D-mesarthrocarpus_Contig93:33136..33415Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig93 33137..33415 -
1680791084.637862-CDS-D-mesarthrocarpus_Contig93:33576..337351680791084.637862-CDS-D-mesarthrocarpus_Contig93:33576..33735Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig93 33577..33735 -
1680791084.6534333-CDS-D-mesarthrocarpus_Contig93:34071..344311680791084.6534333-CDS-D-mesarthrocarpus_Contig93:34071..34431Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig93 34072..34431 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig93.11.1

>prot_D-mesarthrocarpus_Contig93.11.1 ID=prot_D-mesarthrocarpus_Contig93.11.1|Name=mRNA_D-mesarthrocarpus_Contig93.11.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=384bp
MGGKSKRMLEIQPGEDGEVALVNRAKQSRYKAKPSAKVNQSPYFNTPFQQ
GPARIFSPIGIQRSRFFVTSPDSCLGSALTFDWGSAYTEEAVEAFRACPF
FQSHGVRHLCNRLCYLHAYEPCRKWHTLRRAVVDSGGSSRLLDQWAVRIG
KGRDPERSGTKAVPWRISYVSPHGEEYSSVSRVLKILGLADSPSAEVSGE
SMLKSQGRHVEIARPEGPSFLLKEGAEAGDKNFPYSPFGLIEEMLTDDPW
RLLLSCIMLNQTTRSQVDPVLVKFLARFPDAPSVLKGSLDEVAAIVAPLG
LQEKRPRAIIRFSDEYLNKPWQTPTELHWVGKYGADAYKIFINREWKDIQ
ASDHALNWWVEWKQGVECQALSRPAPVKDTGRK*
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mRNA from alignment at D-mesarthrocarpus_Contig93:29730..34484-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig93.11.1 ID=mRNA_D-mesarthrocarpus_Contig93.11.1|Name=mRNA_D-mesarthrocarpus_Contig93.11.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=4755bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig93:29730..34484- (Discosporangium mesarthrocarpum MT17_79)
CAAAAAACGGATTCCCGATCCCATTTGGCCCTCGACATTTTCACCTCTTT
CTCATGGGTGGTAAATCTAAACGAATGTTGGAGATTCAGCCAGGGGAAGA
TGGTGAGGTAGCTTTGGTTAACCGTGCCAAGCAATCGCGGTATAAAGCCA
AGCCCAGCGCGAAAGTTAACCAGAGTCCATACTTTAATACCCCTTTTCAA
CAAGGACCAGCCCGAATTTTTTCCCCAATCGGGATACAGAGAAGTCGTTT
TTTTGTGACTTCACCGGACAGCTGTCTGGGAAGTGCGCTGACCTTCGACT
GGGGTTCGGCCTACACCGAGGAGGCAGTGGAGGCGTTCCGAGCATGTCCG
TTCTTCCAGAGCCATGGTGTACGCCACCTGTGCAACCGACTCTGCTACCT
TCATGCATACGAGGTCAAGATTGCCTGAAAGTGAAGGATAAGAAAAAACC
CCAGACCCTAAGTGCTTGATATATTTAACGCAGGGTTCATTTCGTGTTGC
TTGCGTACATCACCTCTTTTTGTGCTTGATGCATTTTTTTCCACTGTCGA
AATACCTGTTTCCGTGTTATTTTACCACGTGTTGAGCTCGCTGGGCTGTG
TAACATAGTGTCGAGATGTTGCTGATGGCATACTGATATGCCCATGACCT
TTCCTCCGCCACGTCCGCAGTTCTTTGACGGTTGAAACATCCGAGCGTAC
CACTTTTCATCTCCAGTCGCCACCCTTCTCCACGTCCGATCTCGTGCAGC
CCTGCCGGAAATGGCACACACTGCGGCGTGCAGTGGTAGATTCTGGGGGA
TCTTCGCGCTTGTTGGATCAATGGGCTGTCCGCATTGGTAAAGGGCGAGA
TCCTGAACGTTCGGGCACGAAGGCCGTCCCGTGGCGGATTTCTTACGTGT
CACCTCATGTGAGATGGCCCACGGTGACATATGGCTTACACAAGTCTGAC
TTCCATTCAAGCATTGCACCCAATGTGAGGGCATGTCATCTCGTATGTAC
TCTGTGAGATTTATTGATCCTTTTATCACTAACATTGTTTCCTCACAAAA
TGTCCACCATTTCTGACAGGGCGAAGAGTATTCGTCAGTTTCTCGTGTCC
TTAAGATCCTTGGACTAGCCGATTCACCATCTGCAGAAGTCAGTGGGGAG
AGTATGCTGAAATCACAAGGCAGGCATGTGGAAATAGCAAGGCCAGAGGG
GCCATCTTTTCTGCTGAAAGAGGGGGCAGAGGCAGGAGACAAGAACTTCC
CCTACAGTCCTTTTGGTTTGATTGAGGAGATGCTGACAGATGATCCGTGG
CGACTTCTGCTGTCTTGCATCATGCTCAACCAAACAACACGATCCCAGGT
CAGCACCACCCCCATTATTCCATTGTTCCATTATTCCGTTATTCCGAAGT
ACAGAGTATACTTTGATTAGATATTTTCCAGCTCTCTCTGCTAATGAATG
TTACTACAGTACTCCGAGAAAAACAGGGAGAGGCAATTAATTCATGTTAA
TTAAGCACTCCAGATATAGATGTGTATTTATCGGGAAGAGGCAATTCATT
CTGTTTGCTGGGTACTCTGCAAGCTTGTTGGTCTTGTTGAGGTCAAAGAG
ACATTTTTATCGTTTTGTTGGAAGCATAGCCCCTCCCCCCTCCCCCCTCC
CCGCTCCCCTTGAGAAAGTCTCCACCTCTTCGAGGTATGCGGTTTGGCAC
TCATGAAAGCCCAAGCAACACAGAGTATGGAAACCCAATGATTCAAAAGA
TGTTGCTACACCTTGCAGCTTTCAGTCAAGGTAACAACCACACACTGCTC
ATGTGCTTCAACCCTGATGGACCACAAGCTCTGAAACGCCAGGTGTGTGT
CTTAGCAGGCAAGCTTTAACAAAACACACCAGAATCTAGACTACTCCCCC
CCCCCATCCCTTTTCCCTATTTGTAGACAACCCATTACCATGGTTAAATG
GTGGATTAAGTCATTAATGTGCAGTCTCCTTGCCTCCAACTGAAACCCCA
CTTGCTTCCACACACCCTTTACAGGTTGATCCTGTGCTGGTAAAGTTTTT
GGCCAGATTCCCAGATGCTCCCTCAGTTCTGAAGGGGAGCCTTGATGAGG
TCGCTGCGATAGTTGCCCCACTAGGATTGCAGGAGAAGAGACCACGTGCC
ATCATCCGCTTCTCAGGTTCTACAACTTGAACAAGGGGGGACAGATAGAG
ATTGAGCAACCTTTTTTCAGTTCTGCTCTGTTTGTAGAGACCCCTTCATT
CTTTGCTCTTTAGTGCTCCAGAGTCCTGCAGAGTAGTAGCTTTAGGCACT
GTGCAGTGTTTCACCTTGCTGACTTTGATCTTGTCGAACAGCATGTCTAT
ATTGTGTCATAGCCATCAGCAGTCTTTGGACATCAAGAAAAAAACATGCT
CCTCTTTGCCACATGATTTGTCTGCAGATAACATTGCTAGAGTCAGGCAC
GACATGGGACAAGTGAATCTTGCAATAGAATGTCCTCCTCACACCCTTCT
GTCTTCATTTATCCTGACTGGCAGATGAATACCTCAACAAACCCTGGCAA
ACCCCCACGGAACTCCATTGGGTTGGCAAGTACGGGGCTGACGCATACAA
AATATTTATCAATCGAGAGTGGAAGGATATCCAGGCCAGTGACCATGCCC
TGAACTGGTGGGTTGAGTGGAAGCAGGGCGTCGAATGCCAAGCGCTGTCA
AGGCCCGCCCCAGTTAAGGATACTGGGAGGAAGTAAGGTGTGAGGGGGTT
CCTTGGATGACCTGATCTGTACCTGGGGCTGCAAGTAAATGTAGTAGACT
TGTGGTATCTATCTGCTTTGTCTATTGGTATTGCTGTGTCATGCACCTGG
TGCCACAGGAAGAAAGCGTGCAGAGTTGGCAGTAGAGTAGAGTTCATGCG
GAGACAAGACACATTGGCAGGTGGCTCAGCAATTGAGGAATCCAGCAGAC
TTTTACTGTCAAACGGTCAAGGAACTTGGATAATCTTACTGTACTTCAAA
ATGCACACTAGACACCTAGCAGATGATTCAAGATGGCAGTGGGATCAAGG
GTTTGAAGCACACGGTGTGGAAGGGGTAGGGGAGGCGGTAGCAGATGATA
GTGTCATGATCCAGGTGGTGTGTGAGGAGAGTTGGGTTGCATCAAGTGTT
TGGTTGTATTCCTTAATCGGAGCACAGAAATCTCGGCTTCTACCTGCTTC
ATTCCTCCCCTACCTCATTTGCGTCACCAGTGGCTAAAACACCAAGGTCA
CCGCGAAAATCACCAGGGATGAGGACGACAGAGTTTGCCACCAATGGACA
TACATGGTATCCAGGAACAAGGGGGAGGGAAGGTCCACGAGGATCGGAGA
AAATAGAGGCAGAAAGGTCAACCCATATCAGAGGAAGCGAAAGAAAAAGC
ATTGGCTCACCTTATTGATCAAAGACACAGAACCTGTACCCCGGGATTGG
TGAAAACAATAGGTGAGCATCCCTCACAGTACAGATATACATGGGTACGC
TCTTCATGACCTACACCCACTTCTATTGAGGAGGTGCAGCACAGGTGGTT
AAGTAAAACTTTAGTGACCTTTTTTGTCCTTGGCAAAAACTCAAAAGCTG
CTACAACAAAAGCATTAATTGAAGTGCTGAAGTGGCCTGCGGAAGTCCCT
TATGCTGTAGTGGAAGATGGTAACCAGTCCACAGAGGGGACAATCAAAAA
GAACCCATCAACACAGTATCTTACTGCTCTGTGCTTACCCTATCATTGAA
AATCGCTTCTTATTTTGTTTCTTATCCGTTTGTCTGACCAGGCAAGTTGA
GCTGGAGCTTGCATTGCACATTCAAGAGGTCTATTTCCAAGGACAGAAGT
GTGCTGCTTAATTCCTTGATGAGATCCCTGGTGTCACGGTCAGCCCTCAA
TGTGCAGTTTCATTAGTGACCATGTTTGCTGTGCATGTTTCCTAATACTA
GTGTTTGTGTTCAGTATGTACTTTCTGCAAGAATCTCCACCTCTCCCAGG
AGACATGCTGTCCCACTGGGGGGCAAAATTTGTACAGTATACCTACCCAT
TTTAAGTCAGGATTTGCAACACACATTTGACAAAAGTGAGGGGGTAACTG
ATGGACCACAGAAACAGTTGAAATAGCTAGACAGTATGGTTCAGGAGTGC
AACAGGTTTTCACAACATGCCTGAAGATGGCATGATGTGAGCTATTTGGT
ATGAAGGACTCTGAATGCATTCATTGCATTCATCACTCCTTGTATGTGCT
CAGGAGTGATAGATGCAACACCTCACAACCATCTCTCAGCTTGACAAGTA
CCAGGACTGTGCATGGATTATCAAGGACTGTGTGCGTGCTGAATTTTTCT
GTTCTCACAATCCATCAACAAAGAAAAGATGGCTTTCCTTGTGTCGGTAT
AATTTCAGTCATCTGTTGCACCAGAGCAAGCACCTTGGAGGAATTTGATG
TACCCTGGGAGGGAATTTGATGTGATGCGCAGGTAAATGATATCCAGCGC
AACAAAAGTGATCAACCATATGCAGTTGATCATACATAGGGTTGCTTTGT
GGCATTATTACTGAAAATGAATGGCTTTAGTGAGGCAATAAACCACTGTC
GCTTATTCCATAGTGCAATGTGCACAGTTGGGCAGCACAAAGGTTTTTTT
TTTTCCAGAGGAAAAGGTGTTCGCACGTGCCTTATCGATAGCAGTCTGAT
CCAGTGGGACAAAAATCAACATAGGCAGGGATAATACACAAGAAACATTC
AGCAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig93:29730..34484-

>mRNA_D-mesarthrocarpus_Contig93.11.1 ID=mRNA_D-mesarthrocarpus_Contig93.11.1|Name=mRNA_D-mesarthrocarpus_Contig93.11.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1152bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig93:29730..34484- (Discosporangium mesarthrocarpum MT17_79)
ATGGGTGGTAAATCTAAACGAATGTTGGAGATTCAGCCAGGGGAAGATGG
TGAGGTAGCTTTGGTTAACCGTGCCAAGCAATCGCGGTATAAAGCCAAGC
CCAGCGCGAAAGTTAACCAGAGTCCATACTTTAATACCCCTTTTCAACAA
GGACCAGCCCGAATTTTTTCCCCAATCGGGATACAGAGAAGTCGTTTTTT
TGTGACTTCACCGGACAGCTGTCTGGGAAGTGCGCTGACCTTCGACTGGG
GTTCGGCCTACACCGAGGAGGCAGTGGAGGCGTTCCGAGCATGTCCGTTC
TTCCAGAGCCATGGTGTACGCCACCTGTGCAACCGACTCTGCTACCTTCA
TGCATACGAGCCCTGCCGGAAATGGCACACACTGCGGCGTGCAGTGGTAG
ATTCTGGGGGATCTTCGCGCTTGTTGGATCAATGGGCTGTCCGCATTGGT
AAAGGGCGAGATCCTGAACGTTCGGGCACGAAGGCCGTCCCGTGGCGGAT
TTCTTACGTGTCACCTCATGGCGAAGAGTATTCGTCAGTTTCTCGTGTCC
TTAAGATCCTTGGACTAGCCGATTCACCATCTGCAGAAGTCAGTGGGGAG
AGTATGCTGAAATCACAAGGCAGGCATGTGGAAATAGCAAGGCCAGAGGG
GCCATCTTTTCTGCTGAAAGAGGGGGCAGAGGCAGGAGACAAGAACTTCC
CCTACAGTCCTTTTGGTTTGATTGAGGAGATGCTGACAGATGATCCGTGG
CGACTTCTGCTGTCTTGCATCATGCTCAACCAAACAACACGATCCCAGGT
TGATCCTGTGCTGGTAAAGTTTTTGGCCAGATTCCCAGATGCTCCCTCAG
TTCTGAAGGGGAGCCTTGATGAGGTCGCTGCGATAGTTGCCCCACTAGGA
TTGCAGGAGAAGAGACCACGTGCCATCATCCGCTTCTCAGATGAATACCT
CAACAAACCCTGGCAAACCCCCACGGAACTCCATTGGGTTGGCAAGTACG
GGGCTGACGCATACAAAATATTTATCAATCGAGAGTGGAAGGATATCCAG
GCCAGTGACCATGCCCTGAACTGGTGGGTTGAGTGGAAGCAGGGCGTCGA
ATGCCAAGCGCTGTCAAGGCCCGCCCCAGTTAAGGATACTGGGAGGAAGT
AA
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