mRNA_D-mesarthrocarpus_Contig9284.1.2 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9284.1.2 vs. uniprot
Match: D7FGW8_ECTSI (tRNA(Ile)-lysidine synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGW8_ECTSI) HSP 1 Score: 249 bits (635), Expect = 8.060e-73 Identity = 142/267 (53.18%), Postives = 168/267 (62.92%), Query Frame = 1
Query: 643 GDVVLVLTSGGCDSVALLLALTEARNAFHPPIRVEACHFNHGLRAAESDEDEAFVVNLAARLRVPCHVRRWQNAGGGGNGLGGKDGGGREDSGTQIGMVKAPMTGIQEKARDWRRQESQSILQDLISQRKVRSDEAEEGVGGRGEESPQGHIAMAHHRDDQMETILLKALRGVHITNIQGMAWEAHPFIRPLLGVSKEELKAYLLARGQGWRDDESNATTKYRRNRVRLQLLPLLNELVGGESALQARFNEITRQSALAQEMVDAEA 1443
G VLVL SGG DSVALLLAL A F PP+RVEA HFNHGLR +SD D+ VV +A LRVP HVRRW+ G E+ GT P +G+QE+AR WRR E++ IL ++ EA G GGRG IA AHH+DDQ ET+LLKALRG HITNIQGMAW + PF+RPLLG K EL +L+ WR+D SN KY RNRVRLQL+PLL EL GG AL R E++RQS A++MV+ EA
Sbjct: 32 GKEVLVLVSGGSDSVALLLALERAAKTFQPPLRVEAAHFNHGLRGKDSDADQDLVVKMADSLRVPLHVRRWK---------------GPEEGGTG-----GPGSGMQERARRWRRAEAKDILAKSMT-------EAGAGRGGRGV------IATAHHKDDQTETVLLKALRGAHITNIQGMAWHSDPFVRPLLGAHKTELLDFLVRGRHAWREDGSNQVAKYARNRVRLQLIPLLRELAGGTKALDTRVEELSRQSHFARQMVEREA 265
BLAST of mRNA_D-mesarthrocarpus_Contig9284.1.2 vs. uniprot
Match: A0A0M0JCJ3_9EUKA (tRNA(Ile)-lysidine synthetase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JCJ3_9EUKA) HSP 1 Score: 202 bits (514), Expect = 4.710e-55 Identity = 124/262 (47.33%), Postives = 150/262 (57.25%), Query Frame = 1
Query: 628 CGVRGGDVVLVLTSGGCDSVALLLALTEARNAFHPPIRVEACHFNHGLRAAESDEDEAFVVNLAARLRVPCHVRRWQNAGGGGNGLGGKDGGGREDSGTQIGMVKAPMTGIQEKARDWRRQESQSILQDLISQRKVRSDEAEEGVGGRGEESPQGHIAMAHHRDDQMETILLKALRGVHITNIQGMAWEAHPFIRPLLGVSKEELKAYLLARGQGWRDDESNATTKYRRNRVRLQLLPLLNELVGGESALQARFNEITRQSA 1413
CG+ G VL+ SGG DSVALL L E + + A HFNHG R ES+E+E FV +LAA VP HVRR A +A G+QE+ R WRR ES +IL L + E G GGR E P+G + + HH DDQ+ETI+LK LRG H++N+ GM W+ PF+RPLLG K EL AYL A GQ WR+D SNA KY+RNRVRLQLLPLL EL GG L AR + +QSA
Sbjct: 2 CGLGAGAPVLISVSGGSDSVALLRVLVELNSQLQWDLA--AVHFNHGFRR-ESEEEEVFVRSLAAEHGVPMHVRRLAEA------------------------DRALANGVQERTRAWRRTESLAILSSLDAA-------PEHGSGGR--EQPRGAVMLGHHADDQLETIVLKGLRGCHLSNLHGMRWQDGPFVRPLLGQRKSELVAYLRALGQEWREDASNAVPKYKRNRVRLQLLPLLEELTGG--GLHARIGVLEQQSA 225
BLAST of mRNA_D-mesarthrocarpus_Contig9284.1.2 vs. uniprot
Match: A0A7S3SRF0_EMIHU (tRNA(Ile)-lysidine synthetase n=4 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SRF0_EMIHU) HSP 1 Score: 194 bits (494), Expect = 3.470e-52 Identity = 121/274 (44.16%), Postives = 158/274 (57.66%), Query Frame = 1
Query: 613 ALRVNCGVRGGDVVLVLTSGGCDSVALLLALTEARNAFHPPIRVEACHFNHGLRAAESDEDEAFVVNLAARLRVPCHVRRWQNAGGGGNGLGGKDGGGREDSGTQIGMVKAPMTGIQEKARDWRRQESQSILQDLISQRKVRSDEAEEGVGGRGEESPQGHIAMAHHRDDQMETILLKALRGVHITNIQGMAWEAHPFIRPLLGVSKEELKAYLLARGQGWRDDESNATTKYRRNRVRLQLLPLLNELVGGESALQARFNEITRQSALAQEMVD 1434
AL + G G ++V SGGCDSVALL L + + +R+ HFNHGLR ES ++EAFV LA R +P HVRR G ++ GIQE++R+WRR ES ++L +L + + A+ E +A+AHH DDQ ET+LLKALRG H++N++GM W A F+RPLLGV KEEL AYL A G+GWR+D +NA Y+RNR+RLQLLPLL EL GG L AR + QSA +E +D
Sbjct: 56 ALSRDIGATPGQRLVVSVSGGCDSVALLHLLLALQPRWR--LRLHVLHFNHGLRP-ESGDEEAFVHALAERHSLPVHVRR-----------------------LPAGWRESQPGGIQERSREWRRAESLALLDELDAAGPPQFSSADADFAD--EPGAASLVALAHHADDQAETVLLKALRGCHLSNLRGMEWRAGRFVRPLLGVRKEELSAYLGALGEGWREDATNAEPTYKRNRIRLQLLPLLEELTGG--GLLARLGAASEQSAQLREWLD 299
BLAST of mRNA_D-mesarthrocarpus_Contig9284.1.2 vs. uniprot
Match: A0A4D9DAX5_9STRA (tRNA(Ile)-lysidine synthetase n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAX5_9STRA) HSP 1 Score: 187 bits (474), Expect = 1.180e-48 Identity = 110/269 (40.89%), Postives = 154/269 (57.25%), Query Frame = 1
Query: 652 VLVLTSGGCDSVALLLALTEARNAFHPPIRVEACHFNHGLRAAESDEDEAFVVNLAARLRVPCHVRRWQNAGGGGNGLGGKDGGGREDSGTQIGMVKAPMTGIQEKARDWRRQESQSILQDLISQRKVRSDEAEEG--VGGRGE-------ESPQGHIAMAHHRDDQMETILLKALRGVHITNIQGMAWEAHPFIRPLLGVSKEELKAYLLARGQGWRDDESNATTKYRRNRVRLQLLPLLNELVGGESALQARFNEITRQSALAQEMV 1431
V++ SGG DS+ALL LT R + PP+++ HFNHGLR E+ ++EAFV++ A+RL VP H WQ ++ G+Q +AR WRRQE + +LQ+ + ++ + +EG VG R E E QG IA AHH DD +ET +LK LRG HI++++GM A +++PLL + K L +L G W +D SN T KY+RN+VRL+LLPL+ EL GGE AL+AR E+ QS +E V
Sbjct: 115 VVIAVSGGADSMALLHLLTRIRKRWEPPLKLTVAHFNHGLRP-EAAQEEAFVLDAASRLGVPVHTASWQEE------------------------ERSKSAGVQARARQWRRQECERLLQEERISGRWQTGKGKEGGAVGEREERGDGSEKEGAQGVIATAHHADDSLETWVLKLLRGAHISHLRGMEARAGAYVKPLLHLPKTRLVRFLEREGLAWEEDASNQTEKYKRNKVRLRLLPLMAELAGGEEALKARMEEMAEQSRGLEEWV 358
BLAST of mRNA_D-mesarthrocarpus_Contig9284.1.2 vs. uniprot
Match: A0A7S0LJR9_9EUKA (tRNA(Ile)-lysidine synthetase (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LJR9_9EUKA) HSP 1 Score: 171 bits (433), Expect = 7.250e-46 Identity = 113/257 (43.97%), Postives = 142/257 (55.25%), Query Frame = 1
Query: 643 GDVVLVLTSGGCDSVALLLALTEARNAFHPPIRVEACHFNHGLRAAESDEDEAFVVNLAARLRVPCHVRRWQNAGGGGNGLGGKDGGGREDSGTQIGMVKAPMTGIQEKARDWRRQESQSILQDLISQRKVRSDEAEEGVGGRGEESPQGHIAMAHHRDDQMETILLKALRGVHITNIQGMAWEAHPFIRPLLGVSKEELKAYLLARGQGWRDDESNATTKYRRNRVRLQLLPLLNELVGGESALQARFNEITRQSA 1413
G +++V SGG DSVALL L R+ + R+ HFNH LRA E+ +E FV +LA L VP HVRR + G +A G+QE++R WRR ES+ +L +L RSD + S + +A+AHH DDQ ETILLK LRG H++ IQGM F+RPLL K EL AYL + Q W +D SN KY+RNRVRL+LLPLL EL GG AL AR + RQSA
Sbjct: 46 GQLLVVSVSGGADSVALLRLLASLRDEW--AFRLHVLHFNHALRA-EAPSEEEFVRSLADELEVPFHVRRLPS-----------------------GWDRAGKGGVQERSRSWRRAESRQLLSEL-----QRSDMSSS--------SAEPAVALAHHADDQAETILLKCLRGCHLSKIQGMRPRHDIFVRPLLSTRKAELLAYLDSIEQPWMEDSSNGELKYKRNRVRLELLPLLEELTGG--ALMARLHAAERQSA 261
BLAST of mRNA_D-mesarthrocarpus_Contig9284.1.2 vs. uniprot
Match: A0A8J5XS81_DIALT (tRNA(Ile)-lysidine synthetase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XS81_DIALT) HSP 1 Score: 174 bits (442), Expect = 6.890e-44 Identity = 114/275 (41.45%), Postives = 144/275 (52.36%), Query Frame = 1
Query: 613 ALRVNCGVRGGDVVLVLTSGGCDSVALLLALTEARNAFHPPIRVEACHFNHGLRAAESDEDEAFVVNLAARLRVPCHVRRWQNAGGGGNGLGGKDGGGREDSGTQIGMVKAPMTGIQEKARDWRRQESQSILQDLISQRKVRSDEAEEGVGGRGEESPQGHIAMAHHRDDQMETILLKALRGVHITNIQGMAWEAHPFIRPLLGVSKEELKAYLLARGQGWRDDESNATTKYRRNRVRLQLLPLLNELVGGESALQARFNEITRQSALAQEMVDA 1437
+L+ C V G VL L SGG DSVALL L A+ A + V HFNH RA E D +EAFV +LA R HVRR + + P +G+Q R WRR ES ++L L GE + IA+ HH DD +ETILLK LRG H+T + GM PF+RPLLGV KE L +L A G WR+D SNAT KY+RNR+RL+L+PLL +L G AL R N++ Q A+E++DA
Sbjct: 80 SLQAECSVGHGATVLALVSGGRDSVALLHLLARAQPALGFALHV--LHFNHQTRA-ECDSEEAFVRDLAERHNAAFHVRR---------------------------LERVPESGLQAHTRAWRRTESTALLARLA-----------------GETASDAVIALGHHADDDVETILLKWLRGCHVTRLAGMRARDGPFVRPLLGVGKEALTRWLEAGGLEWREDSSNATPKYKRNRIRLELVPLLQQLTG--DALGVRLNDLVEQGREARELLDA 305
BLAST of mRNA_D-mesarthrocarpus_Contig9284.1.2 vs. uniprot
Match: A0A812PZ15_9DINO (tRNA(Ile)-lysidine synthetase n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812PZ15_9DINO) HSP 1 Score: 170 bits (430), Expect = 1.790e-43 Identity = 109/270 (40.37%), Postives = 143/270 (52.96%), Query Frame = 1
Query: 628 CGVRGGDVVLVL-TSGGCDSVALLLALTEARNAFHPPIRVEACHFNHGLRAAESDEDEAFVVNLAARLRVPCHVRRWQNAGGGGNGLGGKDGGGREDSGTQIGMVKAPMTGIQEKARDWRRQESQSILQDLISQRKVRSDEAEEGVGGRGEESPQGHIAMAHHRDDQMETILLKALRGVHITNIQGMAWEAHPFIRPLLGVSKEELKAYLLARGQGWRDDESNATTKYRRNRVRLQLLPLLNELVGGESALQARFNEITRQSALAQEMVD 1434
CG+ G LVL SGG DSVALLL +++ + +H + HFNHGLR ES +E+FV LA H+RR A +K+ G+Q AR WRRQE+ +L+ L EG G G + +AHH DDQ+ET LLK LRG H+ + GM F RPLLG+ K+EL+A+L + GQ W++D SN Y+RNR+RLQL+PLL EL+GGE AL RF + QS M+D
Sbjct: 4 CGMDAGPRPLVLCVSGGSDSVALLLLVSQEKYGWH----LHVLHFNHGLRP-ESASEESFVEGLALSADAKFHLRRADGA-----------------------RLKSAAGGMQAAARAWRRQEALQLLESL------------EGSAASGS----GAVLLAHHADDQVETQLLKLLRGGHLARLSGMNLMEGRFARPLLGIRKQELQAFLKSVGQEWKEDASNQEPVYQRNRIRLQLVPLLTELIGGEDALHGRFEALAEQSEQLSSMLD 229
BLAST of mRNA_D-mesarthrocarpus_Contig9284.1.2 vs. uniprot
Match: A0A813JJ64_POLGL (tRNA(Ile)-lysidine synthetase n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JJ64_POLGL) HSP 1 Score: 169 bits (428), Expect = 1.940e-42 Identity = 112/277 (40.43%), Postives = 152/277 (54.87%), Query Frame = 1
Query: 586 KSIEVVLTEALRVNCGVRGGDVVLVLTS--GGCDSVALLLALTEARNAFHPPIRVEACHFNHGLRAAESDEDEAFVVNLAARLRVPCHVRRWQNAGGGGNGLGGKDGGGREDSGTQIGMVKAPMTGIQEKARDWRRQESQSILQDLISQRKVRSDEAEEGVGGRGEESPQGHIAMAHHRDDQMETILLKALRGVHITNIQGMAWEAHPFIRPLLGVSKEELKAYLLARGQGWRDDESNATTKYRRNRVRLQLLPLLNELVGGESALQARFNEITRQS 1410
+ +E + +L +CG+ + VL+L S GG DSVALLL L + P ++E HFNHGLR E+ +E FV LA+ CHVRR + +A G+Q AR+WRR+ESQ +L+ E G+ P G +AHH DDQ+ET LLK +RG H+ + GM EA F+RPLLG++K L+A+L A GQ W +D SNA Y+RN+VRLQL+PLL EL+GGE A++ RF+ I QS
Sbjct: 97 RGLEHEVERSLLNDCGIPVNEAVLLLVSVSGGLDSVALLLLLDRIARRW-PRWQLEVVHFNHGLRP-EAVAEEIFVNELASLRGRRCHVRRADDP---------------------KKFKEAANGGLQAAAREWRRRESQQLLE-------------ESGL-------PSGSTVLAHHLDDQVETQLLKLIRGGHLARLGGMQPEAGLFVRPLLGITKSRLRAFLEAEGQHWFEDASNARPDYQRNKVRLQLVPLLAELMGGEDAVRQRFDAIGDQS 330
BLAST of mRNA_D-mesarthrocarpus_Contig9284.1.2 vs. uniprot
Match: R1E7U1_EMIHU (tRNA(Ile)-lysidine synthetase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E7U1_EMIHU) HSP 1 Score: 166 bits (419), Expect = 8.800e-42 Identity = 115/285 (40.35%), Postives = 151/285 (52.98%), Query Frame = 1
Query: 613 ALRVNCGVRGGDVVLVLTSGGCDSVALLLALTEARNAFHPPIRVEACHFNHGLRAAESDEDEAFVVNLAARLRVPCHVRRWQNAGGGGNGLGGKDGGGREDSGTQIGMVKAPMTGIQEKARDWRRQESQSILQDLISQRKVRSDEAEEGVGGRGEESPQGHIAMAHHRDDQMETILLKA--LRGVHIT---------NIQGMAWEAHPFIRPLLGVSKEELKAYLLARGQGWRDDESNATTKYRRNRVRLQLLPLLNELVGGESALQARFNEITRQSALAQEMVD 1434
AL + G G ++V SGGCDSVALL L + + +R+ HFNHGLR ES ++EAFV LA R +P HVRR G ++ GIQE++R+WRR ES ++L +L + + A+ E +A+AHH DDQ +L R V +T N++GM W A F+RPLLGV KEEL AYL A G+GWR+D +NA Y+RNR+RLQLLPLL EL GG L AR + QSA +E +D
Sbjct: 39 ALSRDIGATPGQRLVVSVSGGCDSVALLHLLLALQPRWR--LRLHVLHFNHGLRP-ESGDEEAFVHALAERHSLPVHVRR-----------------------LPAGWRESQPGGIQERSREWRRAESLALLDELDAAGPPQFSSADADFAD--EPGAASLVALAHHADDQAGAAVLGGGGTRRVSVTCLGVGRRRRNLRGMEWRAGRFVRPLLGVRKEELSAYLGALGEGWREDATNAEPTYKRNRIRLQLLPLLEELTGG--GLLARLGAASEQSAQLREWLD 293
BLAST of mRNA_D-mesarthrocarpus_Contig9284.1.2 vs. uniprot
Match: A0A1Q9CRH8_SYMMI (tRNA(Ile)-lysidine synthetase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9CRH8_SYMMI) HSP 1 Score: 170 bits (430), Expect = 1.110e-41 Identity = 112/276 (40.58%), Postives = 145/276 (52.54%), Query Frame = 1
Query: 610 EALRVNCGVRGGDVVLVL-TSGGCDSVALLLALTEARNAFHPPIRVEACHFNHGLRAAESDEDEAFVVNLAARLRVPCHVRRWQNAGGGGNGLGGKDGGGREDSGTQIGMVKAPMTGIQEKARDWRRQESQSILQDLISQRKVRSDEAEEGVGGRGEESPQGHIAMAHHRDDQMETILLKALRGVHITNIQGMAWEAHPFIRPLLGVSKEELKAYLLARGQGWRDDESNATTKYRRNRVRLQLLPLLNELVGGESALQARFNEITRQSALAQEMVD 1434
E V CG+ G LVL SGG DSVALLL +++ + + V HFNHGLR ES +E+FV LA H+RR AG +KA G+Q AR WRRQE+ +L+ L EG G G + +AHH DDQ+ET LLK LRG H+ + GM F RPLLG+ K+EL+A+L + GQ W++D SN Y+RNR+RLQL+PLL EL+GGE AL RF + QS M++
Sbjct: 313 EKAMVTCGLDVGPRPLVLCVSGGSDSVALLLLVSQVAQTYGWNLHV--LHFNHGLRQ-ESASEESFVEGLALSADAKFHLRRADGAG-----------------------LKAAAGGLQAAARAWRRQEALQLLESL------------EGSAASGS----GAVLLAHHADDQVETQLLKLLRGGHLARLSGMNLMEGRFARPLLGIRKQELQAFLKSVGQEWKEDASNQEPVYQRNRIRLQLVPLLTELIGGEDALHGRFEALAEQSEQLSSMLE 546 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9284.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9284.1.2 >prot_D-mesarthrocarpus_Contig9284.1.2 ID=prot_D-mesarthrocarpus_Contig9284.1.2|Name=mRNA_D-mesarthrocarpus_Contig9284.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=440bp MLNTIPSCSTSKKSSSPSPSRASRLGKLLSSVMFGVVLPSQVAGFTYPGRback to top mRNA from alignment at D-mesarthrocarpus_Contig9284:4..2457- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9284.1.2 ID=mRNA_D-mesarthrocarpus_Contig9284.1.2|Name=mRNA_D-mesarthrocarpus_Contig9284.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2454bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9284:4..2457- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9284:4..2457- >mRNA_D-mesarthrocarpus_Contig9284.1.2 ID=mRNA_D-mesarthrocarpus_Contig9284.1.2|Name=mRNA_D-mesarthrocarpus_Contig9284.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1320bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9284:4..2457- (Discosporangium mesarthrocarpum MT17_79)back to top |