mRNA_D-mesarthrocarpus_Contig9243.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9243.1.1 vs. uniprot
Match: W4H282_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H282_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 8.500e-14 Identity = 41/88 (46.59%), Postives = 55/88 (62.50%), Query Frame = 1
Query: 1 GTLMLKPATVKVERYKEVMIDKVIPAIKARMPRPPGHTNFVQQDGATPHTGGGGLEAIQA--KAGYSIILETQPGNSPDLSVNDLGFF 258
GTL L+P V YK ++ID VIPAIKA+ P + +QQD A PH ++ +QA G+S+ L+ QP NSPDL++ DLGFF
Sbjct: 192 GTLELRPINVTRTIYKRILIDNVIPAIKAKWPAEATRSVIIQQDNARPHVSPWDIDIVQACTSTGWSMQLKCQPPNSPDLNLLDLGFF 279
BLAST of mRNA_D-mesarthrocarpus_Contig9243.1.1 vs. uniprot
Match: A0A6A4Z322_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z322_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 1.170e-12 Identity = 41/88 (46.59%), Postives = 53/88 (60.23%), Query Frame = 1
Query: 1 GTLMLKPATVKVERYKEVMIDKVIPAIKARMPRPPGHTNFVQQDGATPHTGGGGLEAIQA--KAGYSIILETQPGNSPDLSVNDLGFF 258
GTL L+P V YK+++ID VIPAIKA+ P + +QQD A PH + A G+S+ L+ QP NSPDL+V DLGFF
Sbjct: 265 GTLELRPINVTRPIYKKMLIDNVIPAIKAKWPAESSRSVVIQQDNARPHVAPWDAAVVSACTSDGWSMSLKCQPPNSPDLNVLDLGFF 352
BLAST of mRNA_D-mesarthrocarpus_Contig9243.1.1 vs. uniprot
Match: A0A448ZNT1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNT1_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 7.680e-12 Identity = 40/90 (44.44%), Postives = 58/90 (64.44%), Query Frame = 1
Query: 1 GTLMLKPATVKVERYKEVMIDKVIPAIKARMPRPPGHTN-FVQQDGATPH--TGGGGLEAIQAKAGYSIILETQPGNSPDLSVNDLGFFH 261
GTL+ KP V E YK ++++KV+PAI + PR F+Q+D A PH T ++A A G++I ++TQP NSPD++V DLGFF+
Sbjct: 348 GTLVTKPQNVDGEVYKRMLLEKVLPAIYEKWPRGSSTPEIFIQEDNAKPHKATIREEVKAAAASKGWNITVKTQPPNSPDMNVLDLGFFN 437
BLAST of mRNA_D-mesarthrocarpus_Contig9243.1.1 vs. uniprot
Match: W4FGU6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FGU6_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 1.210e-11 Identity = 38/88 (43.18%), Postives = 55/88 (62.50%), Query Frame = 1
Query: 1 GTLMLKPATVKVERYKEVMIDKVIPAIKARMPRPPGHTNFVQQDGATPHTGGGGLEAIQA--KAGYSIILETQPGNSPDLSVNDLGFF 258
GT+ L+P V +K+++ID VIPAIKA P T F+QQD A PH + ++A G+++ L+ QP NSPD+++ DLGFF
Sbjct: 192 GTMELRPVNVTRPVHKKMLIDNVIPAIKALWPADCSKTVFIQQDNARPHVPPSDADIVKACTSDGWAMKLKYQPPNSPDMNILDLGFF 279
BLAST of mRNA_D-mesarthrocarpus_Contig9243.1.1 vs. uniprot
Match: W4FWJ6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWJ6_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.430e-11 Identity = 40/88 (45.45%), Postives = 54/88 (61.36%), Query Frame = 1
Query: 1 GTLMLKPATVKVERYKEVMIDKVIPAIKARMPRPPGHTNFVQQDGATPHTGGGGLEAIQA--KAGYSIILETQPGNSPDLSVNDLGFF 258
GT+ L+P V YK+++ID VIPAIKA P T F+QQD A H + I+A G+++ L+ QP NSPD++V DLGFF
Sbjct: 87 GTMELRPVNVTRPVYKKMLIDNVIPAIKALWPADCSKTVFIQQDNARLHVPPSDADIIKACTSDGWAMKLKYQPPNSPDMNVLDLGFF 174
BLAST of mRNA_D-mesarthrocarpus_Contig9243.1.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 2.770e-11 Identity = 38/81 (46.91%), Postives = 50/81 (61.73%), Query Frame = 1
Query: 25 TVKVERYKEVMIDKVIPAIKARMPRPPGHTNFVQQDGATPHTGGGGLEAIQAKA---GYSIILETQPGNSPDLSVNDLGFF 258
T+ E YK+ ID ++PAIK +MP VQQDGA+PHTG G E + + G+ + L TQP SPDL++NDLG F
Sbjct: 265 TIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCF 345
BLAST of mRNA_D-mesarthrocarpus_Contig9243.1.1 vs. uniprot
Match: W4G786_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G786_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 4.110e-11 Identity = 38/84 (45.24%), Postives = 53/84 (63.10%), Query Frame = 1
Query: 13 LKPATVKVERYKEVMIDKVIPAIKARMPRPPGHTNFVQQDGATPHTGGGGLEAIQA-KA-GYSIILETQPGNSPDLSVNDLGFF 258
+K +V E YK +++DKVIPAI+A+ PR +QQD A PH ++ + A KA G+ + + QP NSPDL+V DLGFF
Sbjct: 1 MKTVSVTRETYKAMLVDKVIPAIRAKWPRGETKAVKIQQDNARPHVPPSDVDVVAACKADGWDMEVVFQPPNSPDLNVLDLGFF 84
BLAST of mRNA_D-mesarthrocarpus_Contig9243.1.1 vs. uniprot
Match: W4GP40_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GP40_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 4.930e-11 Identity = 38/88 (43.18%), Postives = 53/88 (60.23%), Query Frame = 1
Query: 1 GTLMLKPATVKVERYKEVMIDKVIPAIKARMPRPPGHTNFVQQDGATPHT--GGGGLEAIQAKAGYSIILETQPGNSPDLSVNDLGFF 258
GT++ P TV + Y++++ID VIPAIKA+ P +QQD A PH + A A G++I + QP NSPD++V DLGFF
Sbjct: 171 GTMVTVPCTVTRDTYRDMLIDNVIPAIKAKWPNDKAARILLQQDNARPHVPLSDERVAAACASDGWAIEVVCQPPNSPDMNVLDLGFF 258
BLAST of mRNA_D-mesarthrocarpus_Contig9243.1.1 vs. uniprot
Match: UPI0007EEFD65 (uncharacterized protein LOC108203252 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EEFD65) HSP 1 Score: 67.8 bits (164), Expect = 8.210e-11 Identity = 34/89 (38.20%), Postives = 53/89 (59.55%), Query Frame = 1
Query: 1 GTLMLKPA-TVKVERYKEVMIDKVIPAIKARMPRPPGHTNFVQQDGATPHTGGGGLEAIQAKA--GYSIILETQPGNSPDLSVNDLGFF 258
G + LKP + K+ +++K++PAIKA+ P+ +QQD PH G +E ++ G++I L QP NSPDL+++DLGFF
Sbjct: 112 GVMELKPIENITKVVVKQCLVEKILPAIKAKWPQDNKKHIVIQQDNVRPHISGDDIEFVEVAESDGFNITLANQPANSPDLNISDLGFF 200
BLAST of mRNA_D-mesarthrocarpus_Contig9243.1.1 vs. uniprot
Match: A0A3R7YI76_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7YI76_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.000e-10 Identity = 36/84 (42.86%), Postives = 52/84 (61.90%), Query Frame = 1
Query: 13 LKPATVKVERYKEVMIDKVIPAIKARMPRPPGHTNFVQQDGATPHTGGGGLEAIQA--KAGYSIILETQPGNSPDLSVNDLGFF 258
L+P V +K+++ID VIPAIKA P T F+QQD A PH + ++A G+++ L+ QP NSPD+++ DLGFF
Sbjct: 3 LRPVNVTRPVHKKMLIDNVIPAIKALWPADCSKTVFIQQDNARPHVPPSDADIVKACTSDGWAMKLKYQPPNSPDMNILDLGFF 86 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9243.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9243.1.1 >prot_D-mesarthrocarpus_Contig9243.1.1 ID=prot_D-mesarthrocarpus_Contig9243.1.1|Name=mRNA_D-mesarthrocarpus_Contig9243.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=97bp MLKPATVKVERYKEVMIDKVIPAIKARMPRPPGHTNFVQQDGATPHTGGGback to top mRNA from alignment at D-mesarthrocarpus_Contig9243:4430..4946- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9243.1.1 ID=mRNA_D-mesarthrocarpus_Contig9243.1.1|Name=mRNA_D-mesarthrocarpus_Contig9243.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=517bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9243:4430..4946- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9243:4430..4946- >mRNA_D-mesarthrocarpus_Contig9243.1.1 ID=mRNA_D-mesarthrocarpus_Contig9243.1.1|Name=mRNA_D-mesarthrocarpus_Contig9243.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=291bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9243:4430..4946- (Discosporangium mesarthrocarpum MT17_79)back to top |