mRNA_D-mesarthrocarpus_Contig9236.1.2 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9236.1.2
Unique NamemRNA_D-mesarthrocarpus_Contig9236.1.2
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9236.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9236contigD-mesarthrocarpus_Contig9236:241..5041 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size1767
Hectar predicted targeting categoryother localisation
Exons6
Cds size1599
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9236.1.2prot_D-mesarthrocarpus_Contig9236.1.2Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9236 1646..5041 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791077.9118469-UTR-D-mesarthrocarpus_Contig9236:240..2841680791077.9118469-UTR-D-mesarthrocarpus_Contig9236:240..284Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9236 241..284 +
1680791077.9273882-UTR-D-mesarthrocarpus_Contig9236:1339..13681680791077.9273882-UTR-D-mesarthrocarpus_Contig9236:1339..1368Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9236 1340..1368 +
1680791077.9375398-UTR-D-mesarthrocarpus_Contig9236:1552..16451680791077.9375398-UTR-D-mesarthrocarpus_Contig9236:1552..1645Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9236 1553..1645 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791077.9537675-CDS-D-mesarthrocarpus_Contig9236:1645..18101680791077.9537675-CDS-D-mesarthrocarpus_Contig9236:1645..1810Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9236 1646..1810 +
1680791077.9642422-CDS-D-mesarthrocarpus_Contig9236:2487..32161680791077.9642422-CDS-D-mesarthrocarpus_Contig9236:2487..3216Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9236 2488..3216 +
1680791077.9790437-CDS-D-mesarthrocarpus_Contig9236:3664..39671680791077.9790437-CDS-D-mesarthrocarpus_Contig9236:3664..3967Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9236 3665..3967 +
1680791077.9946294-CDS-D-mesarthrocarpus_Contig9236:4639..50411680791077.9946294-CDS-D-mesarthrocarpus_Contig9236:4639..5041Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9236 4640..5041 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9236.1.2

>prot_D-mesarthrocarpus_Contig9236.1.2 ID=prot_D-mesarthrocarpus_Contig9236.1.2|Name=mRNA_D-mesarthrocarpus_Contig9236.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=533bp
MGGASSDMFWNPDMSDLEPTPLETGLMERISTPGAQGDFDFFDLDPFPLE
SDEQWSLSSQQKPADAQDSTQDSALSQATVSTPGSASGISWPTPFDDMGL
GTTLTPDIQLHPTPASLPQGSEAPQLGQQLMPAFPQIGAVSSGAGSPVAS
AGALAAPTVSPMAAMAGSVSSPMPVVLPAVAASQGHGSPTAVALGNNVQA
PGALAPAPAPAAGVTSLRMATAATAVSAAMASPVVATEHVQMLPAATGAG
DGRQASAVSSPMPMGAALSATGATEGGGITGLSGVSMPARDHLLSATQGK
QQHAVDRLTAAALGNELAAANLGRLSAGVSAHLGFRAPGSAPPTDTQRPY
LSGGPDYRDPDVVSVTRQLGLSADLTPEERSARLTPKELTNAAHAIRRQA
NNAFEAMAAAVEASTPGDPSALRNVLSSQLGPMPGLLAGLTNGCASLPVD
IEPTGGQQQQQGTASLPAMSSNKRQGMGGLDDQRPAKLLRPSSSAGGSGS
GLDATGVRMADGDANGEGDETGGVKVEKDSDKG
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mRNA from alignment at D-mesarthrocarpus_Contig9236:241..5041+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9236.1.2 ID=mRNA_D-mesarthrocarpus_Contig9236.1.2|Name=mRNA_D-mesarthrocarpus_Contig9236.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=4801bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9236:241..5041+ (Discosporangium mesarthrocarpum MT17_79)
TAAGGGTTAAGCGGGAGTGGATACAAGAGCAAGCACGGCAAGAGGCAAGA
ATGGGTTGGGGCCTTGATGGTGTATAGGGATGTCCTTGACACCTAGTCTT
CTAGAGTACTCCTACTGGATGAGGTCTAGTTGGAGACAGACCCTAACCCT
AGCCCAAGATGCAAGCCAAATGAATATTCTTTCCTTATGGAATACAAAGC
GCCTCCCTTGGGGAGGGAGGGTTTTCATCGAGTGGTGCTGTGCTAGAAAG
TGCGCAACAGAGAAGTTAATAAAAAAGATTACTGTGTAACTAGTAATATT
AAGTGGTATTTAGAATACCTTTAATCAATGCATACAATTTAAGTGGTAGT
TACTTTTCAGCATATTCTTTACTTCAGTTTATTTCACTGTATGCGTTGTT
CCTCTGAATGATACCTGGTTTTTGTCCATCTGCATCCCTGGCTCGATGTT
TCCCTTACCTCTACCCTCCATCTTGGGGATGTGAGTTGAACTTCTAACTG
TAACCCTAACCCTAACCCCAACCCCAACCGTAACCCTAACCCTAACCCTA
ACCCTAACCGTAACTGTGGACATTGTGATTGTAACTTGAATTGCTCCCCC
GCTTGTCTACCTCCCTTCTCGTGCCTTTCTCTGTTTGTTTTGATTGAGGC
TTGTAGTGTCGGTTGTGACTCTGCTCAGGTTTGGTATATCAATAGCGATA
TCGTATATCAACAGCAGTATCGTATATCAGCAGCAATATTGTAGTATCAA
CAGCGATATGGTATAGCAACAGCGGTAAAACACCACGTGGTAGTAGTTTT
TTTCCTTTTCTCTACGGTAGAAAGCAAGTGAATTGTGGACACAAGCACAG
TGAGAAAGAAGGCCAAGCATGTGTCCCCTTCTTGCCATCTAGCACCTTCT
GAGTTGTGAATGTCCACAGGTGGGGTTAGGGTTAGGGTTAGTGTTGGTAA
CAAGACGGCTGGCACCATATTTCTTTTACTGATTCAGGGTTAGGGTTAGA
AGGTAGGTCCAAGACACCCATCGTCATCTCTCAGTAGTCGATGGCACTCC
TGGCCCTGGACCTGTGTCTGCGTTTCCTACCTTGCCCCCCATGCAGCAGG
CTCAGCGGCAACAGCAAGAGAAGGCTCAGCAGCAGCAGCAGCAGCAGCAG
CGGCGGCAACAACAGCTCCAGGTTCAGGTGCAGCAGCAGCAGCAGCAGCA
GCAGCGGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAGGAGCAAC
AGCAGGCACAGCGGCAGGCACAGCAGCAACAACAGCAACAACAGCAAGTG
GCCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGCCCAACA
GCAACAGCAGCAGCAAGTGGGGGGGGTGCAGCTCCCCGCATCTGCCCCTG
TGCTCATGGGCGGAGCGTCGTCTGACATGTTCTGGAACCCGGACATGTCA
GACCTGGAGCCGACGCCCCTTGAGACGGGTTTGATGGAGCGCATCTCGAC
CCCTGGTGCCCAGGGAGACTTCGACTTCTTTGACCTGGACCCATTCCCCC
TGGAGTCAGATGAGCAATGGGTGAGCCAGCTGTTTTTTGCCCTGGGGTGC
TGTGACGACAGTGGGTATCTGTCCTTGGATATCTGTCCTTGGTGGTTGTT
CCCCGTCCTCCCTTCCCTATTCTTTCTTTTTCTCATGCCCCGTGTTTGGC
GGACGGGATATGTGCTGATGGCGTTTTTATATATCGACTCCGTATTGTAG
TAGCGCCTCAGCCTTGAGAGCCCAACTCTGCCTGGGCCCTGTCCCCGCTC
AGTACCCCCCACCCTCTTGAATGAAAATGTATTTATTCTCTGACGCTGTT
GGCCTCAAAATGCTATGAAGGGTACACTAACCAAGGCACACTAAAAAATA
TTGTCAGCGGAACTCCAGCGCAATGTCAGCCCGCTGTGGGCAGTTGTGAA
TCAATTGATCTTGGATGTTTTTCTCTCTCTTGGTGTACTCCACAAGGTGG
TGATGTATACAGTCTGTTCTTGATGTAACTCTCCTCAATTCTTGATGTAA
CTCTCCTCAATTCTTGATGTAACTCTCCTCAATTCTTGGTGTAACTCTCC
TCAATTCTTGATGTAACTCTCCTCAATTCTTGATGTAACTCTCCTCAATT
CTTGGTGTAACTCTCCTCAATTCTTGATGTACTCAATTTATCCTCTGTCC
CTCTTTTTTTGTCCTTCCCCAACCGCCAACCCAAATCCACCCACCAGTCT
CTGTCCAGCCAGCAGAAGCCCGCGGACGCCCAGGACTCCACCCAGGACTC
CGCCCTCTCCCAGGCCACGGTAAGCACCCCGGGCTCAGCCTCTGGCATTT
CATGGCCCACCCCCTTTGATGACATGGGGCTGGGTACAACCCTCACTCCG
GACATCCAGCTGCACCCTACCCCTGCTTCCCTTCCACAGGGCTCGGAAGC
TCCGCAGCTGGGACAGCAGCTCATGCCCGCCTTCCCACAGATAGGGGCTG
TGAGCAGCGGGGCAGGGTCTCCCGTGGCCAGTGCGGGCGCCCTTGCAGCG
CCCACTGTGAGCCCCATGGCAGCGATGGCAGGATCGGTTTCATCCCCCAT
GCCTGTTGTCTTGCCGGCTGTGGCTGCATCGCAGGGTCACGGCAGTCCAA
CGGCTGTGGCACTGGGAAACAATGTGCAGGCACCAGGGGCACTGGCCCCA
GCCCCAGCGCCGGCTGCAGGAGTAACTTCCCTGAGAATGGCTACTGCCGC
CACTGCTGTAAGTGCTGCCATGGCGAGCCCTGTGGTCGCCACAGAGCATG
TGCAAATGCTGCCGGCAGCGACCGGGGCAGGGGATGGAAGGCAGGCGAGT
GCGGTGTCATCACCAATGCCTATGGGAGCGGCCCTGAGCGCCACGGGGGC
AACAGAGGGAGGAGGCATTACCGGGCTGTCTGGGGTGTCGATGCCTGCCA
GAGACCACTTACTCTCTGCCACTCAGGTGACCCAAACCCTAACCGTCGGG
AAGTTACATCCAACCTAGGTCCAGATTCTTGTTTCACTTGGTTTTGGTGT
TTTTTTTGGCAGGAGGTTCCCTGAGGCAGGAGGTTCCTTGAGGCGTTTTT
TGGCTGTCACTACCTGCCCCTTCGCATAGCTTACTTTTTTTTTATAGCCC
CCCACCCCCTACCTACCACACACATACATGCTGCCCTTCTATTTCCGCTT
GGAGAAGAGAAAAAGTGGCGGCTTGTTCTATCCCTAACCCTTGCTCTAAC
CCTTCCCCCCAGTACTCTTGTTTCAGGTGCTCCAATGAACCCCCCCCCCC
GACACCAAGTAGCAAAAAAAACGAAAAATAGAGCGATAGTTATCCCACCA
TAGCCCCCGGACCAGAGAGAAGGAAATAGAAAGGAGCTAACAAAAACAAA
AAACAAAAAAAACAAAAAAAACAGGGCAAGCAGCAGCATGCCGTGGATCG
GCTGACCGCAGCAGCTCTGGGCAACGAGCTGGCGGCAGCCAACCTGGGGC
GGCTCTCTGCTGGAGTGTCCGCCCACCTGGGGTTTCGTGCCCCGGGGTCA
GCGCCCCCCACCGACACCCAACGCCCATACCTGTCGGGGGGCCCTGACTA
CCGGGACCCAGATGTGGTCTCGGTCACGCGGCAGCTGGGCCTGTCGGCGG
ACCTGACCCCCGAGGAGAGGAGCGCGAGGCTGACCCCCAAGGAGCTGACC
AATGCGGCCCATGCCATCCGGCGCCAGGTGTGATGCAGATGCAGACAGAT
GAAGAAGAAGTGGGTTTGAGTTGTTGAGCGGTGGGCAGGTGTGTGTGTGT
GTGTGTGTGTGTGTGTTTTGTGTGTGTTTAGGGGGTGGGGGTGGGGGTCT
TTAGGGAGGGGTCTTGTGTGTATCGGTCTTGTATGCAAGGGTTAGGGTTG
GGGTTGGGGCTAGGGCTGCGGGCCTGCCAAGTAGTCTCAGCAGAGTTCTT
CCCAGATGTCTACTCATCATTGTATGGTGTAAAGAATAGGAATGAATCCT
TCTGCCTCCTGGGTTTCTTTCCAGGTATGATGTAGAAGTGTCGATGACAC
CATGCCCTGAAGTAGGTCTTATGCTGGTACTTGTAAAAGACTTGAGTCAC
CTTAGTTCTTGAAATGCCAAGTAGTGCAGAGCATTTAACAAGGAGAAAAG
GAAGAAGAAAAAAAGAGGAATGTATGTTGAGGTATGAAAAAGAAGAAAAA
AAGTCTTGCACTCCAATTTGTTTTTTTCACCTTGATTTTTTGAGTGTGCT
CATTGCTCTGTCTCAAACTATCCAGACCCCATACCCCGCAGACGTTGCAG
GCACCCTGTTGTTCCAACACCTGCCCTCTTCCCACTGCCCCCTTGGTGCC
CCTGCATCGCCAACCCTTCTCCCCGCCCTCCCCGGAAACCAAAACATAGG
CCAATAATGCCTTTGAGGCCATGGCTGCAGCGGTGGAGGCCTCCACCCCA
GGAGATCCCTCTGCCCTCCGGAACGTCCTATCCAGCCAGCTGGGGCCAAT
GCCAGGCCTCCTGGCGGGGCTGACCAATGGCTGCGCGAGCCTCCCAGTGG
ACATTGAGCCCACTGGAGGGCAGCAGCAGCAGCAGGGCACAGCTTCGTTG
CCAGCAATGAGCAGCAACAAGAGGCAGGGAATGGGCGGGCTGGATGACCA
ACGGCCTGCCAAGCTCCTGCGCCCCAGCTCCTCAGCGGGTGGCTCTGGGT
CAGGTTTGGACGCCACAGGAGTGAGGATGGCGGATGGTGATGCCAACGGT
GAAGGGGATGAGACGGGGGGGGTGAAAGTTGAGAAGGACTCCGACAAGGG
C
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9236:241..5041+

>mRNA_D-mesarthrocarpus_Contig9236.1.2 ID=mRNA_D-mesarthrocarpus_Contig9236.1.2|Name=mRNA_D-mesarthrocarpus_Contig9236.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1599bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9236:241..5041+ (Discosporangium mesarthrocarpum MT17_79)
ATGGGCGGAGCGTCGTCTGACATGTTCTGGAACCCGGACATGTCAGACCT
GGAGCCGACGCCCCTTGAGACGGGTTTGATGGAGCGCATCTCGACCCCTG
GTGCCCAGGGAGACTTCGACTTCTTTGACCTGGACCCATTCCCCCTGGAG
TCAGATGAGCAATGGTCTCTGTCCAGCCAGCAGAAGCCCGCGGACGCCCA
GGACTCCACCCAGGACTCCGCCCTCTCCCAGGCCACGGTAAGCACCCCGG
GCTCAGCCTCTGGCATTTCATGGCCCACCCCCTTTGATGACATGGGGCTG
GGTACAACCCTCACTCCGGACATCCAGCTGCACCCTACCCCTGCTTCCCT
TCCACAGGGCTCGGAAGCTCCGCAGCTGGGACAGCAGCTCATGCCCGCCT
TCCCACAGATAGGGGCTGTGAGCAGCGGGGCAGGGTCTCCCGTGGCCAGT
GCGGGCGCCCTTGCAGCGCCCACTGTGAGCCCCATGGCAGCGATGGCAGG
ATCGGTTTCATCCCCCATGCCTGTTGTCTTGCCGGCTGTGGCTGCATCGC
AGGGTCACGGCAGTCCAACGGCTGTGGCACTGGGAAACAATGTGCAGGCA
CCAGGGGCACTGGCCCCAGCCCCAGCGCCGGCTGCAGGAGTAACTTCCCT
GAGAATGGCTACTGCCGCCACTGCTGTAAGTGCTGCCATGGCGAGCCCTG
TGGTCGCCACAGAGCATGTGCAAATGCTGCCGGCAGCGACCGGGGCAGGG
GATGGAAGGCAGGCGAGTGCGGTGTCATCACCAATGCCTATGGGAGCGGC
CCTGAGCGCCACGGGGGCAACAGAGGGAGGAGGCATTACCGGGCTGTCTG
GGGTGTCGATGCCTGCCAGAGACCACTTACTCTCTGCCACTCAGGGCAAG
CAGCAGCATGCCGTGGATCGGCTGACCGCAGCAGCTCTGGGCAACGAGCT
GGCGGCAGCCAACCTGGGGCGGCTCTCTGCTGGAGTGTCCGCCCACCTGG
GGTTTCGTGCCCCGGGGTCAGCGCCCCCCACCGACACCCAACGCCCATAC
CTGTCGGGGGGCCCTGACTACCGGGACCCAGATGTGGTCTCGGTCACGCG
GCAGCTGGGCCTGTCGGCGGACCTGACCCCCGAGGAGAGGAGCGCGAGGC
TGACCCCCAAGGAGCTGACCAATGCGGCCCATGCCATCCGGCGCCAGGCC
AATAATGCCTTTGAGGCCATGGCTGCAGCGGTGGAGGCCTCCACCCCAGG
AGATCCCTCTGCCCTCCGGAACGTCCTATCCAGCCAGCTGGGGCCAATGC
CAGGCCTCCTGGCGGGGCTGACCAATGGCTGCGCGAGCCTCCCAGTGGAC
ATTGAGCCCACTGGAGGGCAGCAGCAGCAGCAGGGCACAGCTTCGTTGCC
AGCAATGAGCAGCAACAAGAGGCAGGGAATGGGCGGGCTGGATGACCAAC
GGCCTGCCAAGCTCCTGCGCCCCAGCTCCTCAGCGGGTGGCTCTGGGTCA
GGTTTGGACGCCACAGGAGTGAGGATGGCGGATGGTGATGCCAACGGTGA
AGGGGATGAGACGGGGGGGGTGAAAGTTGAGAAGGACTCCGACAAGGGC
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