mRNA_D-mesarthrocarpus_Contig9218.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9218.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig9218.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9218.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9218contigD-mesarthrocarpus_Contig9218:1001..2573 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size507
Hectar predicted targeting categoryother localisation
Exons4
Cds size507
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791075.784685-CDS-D-mesarthrocarpus_Contig9218:1000..11291680791075.784685-CDS-D-mesarthrocarpus_Contig9218:1000..1129Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9218 1001..1129 +
1680791075.7969406-CDS-D-mesarthrocarpus_Contig9218:1553..16791680791075.7969406-CDS-D-mesarthrocarpus_Contig9218:1553..1679Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9218 1554..1679 +
1680791075.8071966-CDS-D-mesarthrocarpus_Contig9218:2043..21691680791075.8071966-CDS-D-mesarthrocarpus_Contig9218:2043..2169Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9218 2044..2169 +
1680791075.817806-CDS-D-mesarthrocarpus_Contig9218:2447..25731680791075.817806-CDS-D-mesarthrocarpus_Contig9218:2447..2573Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9218 2448..2573 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9218.2.1prot_D-mesarthrocarpus_Contig9218.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9218 1001..2573 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9218.2.1

>prot_D-mesarthrocarpus_Contig9218.2.1 ID=prot_D-mesarthrocarpus_Contig9218.2.1|Name=mRNA_D-mesarthrocarpus_Contig9218.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=169bp
QGKYDEAERVFRRVLAFLEGAVVPDYALSRSVLSDLGGVLSHQGKDEEAE
PLYRRAIAIGETVLGAQHPDLIEDLDHLAAGLNKQEKFHDAEAIYRKVLV
IKEKSLGHDHPDLANSINNLAESLRDQDKDAEAESLYRWAISIEKIGRGI
NHPRFAAALSNMARIYRDQ
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mRNA from alignment at D-mesarthrocarpus_Contig9218:1001..2573+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9218.2.1 ID=mRNA_D-mesarthrocarpus_Contig9218.2.1|Name=mRNA_D-mesarthrocarpus_Contig9218.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1573bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9218:1001..2573+ (Discosporangium mesarthrocarpum MT17_79)
CAGGGCAAGTATGATGAGGCAGAGAGGGTGTTCCGGCGTGTCCTCGCCTT
TCTGGAGGGGGCTGTGGTGCCGGACTATGCACTTTCTCGCTCCGTCTTGA
GTGACCTTGGTGGGGTGCTGAGCCACCAGGTAGGCTGGAGGGGGAGAAGT
GGGGGGGAGCTAAGTTTGGGTTGGTTGAGGTACTGCTTTTCCTTTTTTTT
TGATCCTTGACCCCAGGTGCTGGGAACACACACCTTGATTGTGGCAGAGA
ATGGTGTGTCTCTCTTGTGGAGACATTCAGGGGCTGAGGGAGTCATTTTT
TTGGCAGGGGGAGGAGGGATGCTGTCCAAATTGAGAGATAGTTGACCTTT
AAACTTAGTTCTTCGAGGGCTTAGATGTACTTTGAAGTGAAAAAACGCTC
TGAATTAAGAGTGAAAACCTCAAAAAGTTCAACTTAGATTAGAGGTCTTT
AACAAGCATCAGGAAGCACTCAATACTTGGTCTGCAAGAAACTCTTTTGT
GAACGGGGTCTGATTGACAAGGCCTTTTGTGTCTGGGGCCTGGACTTGCT
AAGGGTAAGGATGAGGAGGCTGAGCCCCTCTACCGCCGGGCTATCGCCAT
CGGAGAGACGGTGCTCGGTGCCCAGCACCCGGATCTTATCGAGGACCTGG
ATCACCTCGCTGCTGGGCTGAACAAACAGGTGGGGGTGCGGAGGTCAGGC
GCCTCTTTGCTGCTTGGTAAACGGTGAAGGGCTGTTGCTGAGTGAGTCTG
TCTGTTTGGGACATGGAAACACCGACTGATCGTATCTCATGCGTTTTGGC
TTCTTCTTCTCCTGTTCCGGGTTGAATGTGTCCGTATGTACGCAAATGCA
ATGCCCAGCTGGAACCTTTGAGTGCTCTTTTTTTGTCTCACACGAGAAAG
TGAGCACCTCTGCCACCGCCGCCGGCGTCTTCTCTTTCTTTTTTTTTTTT
TGTTAGATGAGGTTGTAATCCCTGATGACAAAATGAGGCGTTTTTTCCTA
TCCCTTTTTCGGTGCTTTTTTTTGCTGGCACCACACCCCACAGGAGAAGT
TCCACGACGCGGAGGCGATCTACCGCAAGGTCCTCGTCATCAAGGAGAAG
TCGCTGGGGCATGACCACCCAGACCTGGCCAACAGCATCAACAACCTCGC
GGAGAGCCTCAGGGACCAGGTGGGGCTACCACAAAAAAACGCGTTGGTTG
GAGGGGTGCAGTCGTTGGTCTTGCCGGCGGCGGCCATTGCGTGTACACCG
AGGTGTCTTTCTGAGTAGGTTGTTTGAGCCGCCCGTTGCCAGCTGTTTCT
TTTTTTTTTTTGTTCTCTCCCGGTTTCGTCTCTTTCATGTCTATGGCCCT
GCAACACAAGAAGAGGTGCTCTGTCCTTGTGTGTCTGTTCTTGGACCTGA
CCTGGGTGCCCGCGCCTTTCGATGTGGCGTGTGCCATGCCGATGAAGGAT
AAGGATGCGGAGGCTGAATCGCTGTATCGGTGGGCGATCTCGATTGAGAA
GATTGGCCGGGGGATCAATCACCCACGATTCGCTGCCGCCCTGAGCAACA
TGGCCAGGATATACAGGGACCAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9218:1001..2573+

>mRNA_D-mesarthrocarpus_Contig9218.2.1 ID=mRNA_D-mesarthrocarpus_Contig9218.2.1|Name=mRNA_D-mesarthrocarpus_Contig9218.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=507bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9218:1001..2573+ (Discosporangium mesarthrocarpum MT17_79)
CAGGGCAAGTATGATGAGGCAGAGAGGGTGTTCCGGCGTGTCCTCGCCTT
TCTGGAGGGGGCTGTGGTGCCGGACTATGCACTTTCTCGCTCCGTCTTGA
GTGACCTTGGTGGGGTGCTGAGCCACCAGGGTAAGGATGAGGAGGCTGAG
CCCCTCTACCGCCGGGCTATCGCCATCGGAGAGACGGTGCTCGGTGCCCA
GCACCCGGATCTTATCGAGGACCTGGATCACCTCGCTGCTGGGCTGAACA
AACAGGAGAAGTTCCACGACGCGGAGGCGATCTACCGCAAGGTCCTCGTC
ATCAAGGAGAAGTCGCTGGGGCATGACCACCCAGACCTGGCCAACAGCAT
CAACAACCTCGCGGAGAGCCTCAGGGACCAGGATAAGGATGCGGAGGCTG
AATCGCTGTATCGGTGGGCGATCTCGATTGAGAAGATTGGCCGGGGGATC
AATCACCCACGATTCGCTGCCGCCCTGAGCAACATGGCCAGGATATACAG
GGACCAG
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