mRNA_D-mesarthrocarpus_Contig92.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig92.1.1 vs. uniprot
Match: D7G3R9_ECTSI (Helicase_C_4 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3R9_ECTSI) HSP 1 Score: 132 bits (331), Expect = 4.060e-30 Identity = 93/233 (39.91%), Postives = 137/233 (58.80%), Query Frame = 1
Query: 70 GHASFTEAAAVWLTSVGIEATKQANAANIRVSKRSFNSKDNSLVKTFLNRMLGMTIRAQTFLFDYFHAVLENVVKEAKRDGTFEDGILCLTGRSCVVDIPRPLTLPQELSVEDGAVRSMYVTVDRSIPWEEILPMYHEAKIQSEKLLKLAVERHNAMKGARGLYKSNHLKAPKESLTGFWKNKNVNNGIHYVLLSIDY--QIAQSDNFTGLTKGMSVFSPVTGQRIEANRDIF 762
G +F EA VWL VGI + + N R+ + N + N V FLNR+LG+ I Q LFDYFH+VLE VKEAKRDGT+EDGI LTG SC V + R L LP+E + G V ++ VT+D+S+ +++ILP YH AK ++++ ++LA ++ A + A G K N + S TGFW ++ V L +DY ++ + G+ + ++V+SP G R+E + F
Sbjct: 15 GDVTFFEAVLVWLGKVGI--VVEDDEVNGRIHQ---NVQGN--VSRFLNRILGLRIVRQHVLFDYFHSVLEYHVKEAKRDGTYEDGIRSLTGASCSVSVMRALDLPEETGLAKGEVEAVKVTIDKSMTFQQILPKYHFAKEETDRRIELA-KKMQAERVAAG-NKVNQRQI--FSKTGFWTKRSGTE----VYLVVDYPGRVTSGYSTYGVKRPVTVWSPCRG-RVEISYKAF 231
BLAST of mRNA_D-mesarthrocarpus_Contig92.1.1 vs. uniprot
Match: A0A7S2G6V9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G6V9_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 4.290e-8 Identity = 34/94 (36.17%), Postives = 52/94 (55.32%), Query Frame = 1
Query: 79 SFTEAAAVWLTSVGIEATKQANAANIRVSK----RSFNSKDNSLVKTFLNRMLGMTIRAQTFLFDYFHAVLENVVKEAKRDGTFEDGILCLTGR 348
+F EAA WL VGI ++ + + ++ + V FLNR+LG+ + Q L DYF A+ E +VK+A+ DGT+++GI L GR
Sbjct: 12 TFLEAAGWWLDDVGINLREEDENVDSEQKRXXXXKAREERKGPPVSQFLNRLLGLPQKHQNILLDYFMAIHEVIVKQARADGTYDEGITILKGR 105
BLAST of mRNA_D-mesarthrocarpus_Contig92.1.1 vs. uniprot
Match: UPI001E2793F8 (protein strawberry notch homolog 1-like isoform X1 n=13 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E2793F8) HSP 1 Score: 66.2 bits (160), Expect = 4.440e-8 Identity = 75/294 (25.51%), Postives = 118/294 (40.14%), Query Frame = 1
Query: 106 LTSVGIEATKQANAANIRVSKRSFNSKDNSLVKTFLNRMLGMTIRAQTFLFDYFHAVLENVVKEAKRDGTFEDGILCLTGRSCVVDIPRPLTLPQELSVEDGAVRSMYVTVDRSIPWEEILPMY-HEAKIQSEKLLKLAVERHNAMKGARGLYKSNHLKAPKESLTGFWKNKNVNNGIHYVLLSIDYQIAQSDNFTGLTKGMSVFSPVTGQRIEANRDIFASRRKRVTSLEEAEMLWRQEALAPALTER----------------RSVKSLVFEGKILPIWKYVETSLYNLQKE 936
L VG+ +K+ N + K+ + + FLNR+LGM + Q LF YF + ++ AKRDGTF+ GIL L +S +D R +T +Y H I +L KL VER + K A YK E GF+++ V+NG HYV+L + NF + ++ P TG++ + + + ++A LW ++ T + RS V G +LPIW +E ++ + E
Sbjct: 1539 LIGVGLITSKKENDLTL--------DKEYNNMSKFLNRILGMPVDLQNRLFQYFTDTMNALIDMAKRDGTFDLGILDLG-----------------VSSQDVIKRVRTITF-----------LYKHATGIAPIELHKLIVERGMSWKAAEEKYKE----VCTEEYEGFFQSHQVSNGKHYVILLTKVDSTKR-NFKNEDIKLRLYRPNTGRKNKITTASEIQLQYKKVEPQDAMNLWIEQYNCTVCTHKYWTGHCSIGTTCESGLRSKTYHVLAGSVLPIWLKIEAAISEKKSE 1791
BLAST of mRNA_D-mesarthrocarpus_Contig92.1.1 vs. uniprot
Match: A0A7R9KDN0_9ACAR (Hypothetical protein n=1 Tax=Medioppia subpectinata TaxID=1979941 RepID=A0A7R9KDN0_9ACAR) HSP 1 Score: 64.7 bits (156), Expect = 6.040e-8 Identity = 36/106 (33.96%), Postives = 59/106 (55.66%), Query Frame = 1
Query: 184 KDNSLVKTFLNRMLGMTIRAQTFLFDYFHAVLENVVKEAKRDGTFEDGILCLTGRSCVVDIPRPLTLPQELSVEDGAVRSMY--VTVDRSIPWEEILPMYHEAKIQ 495
KD S + FLNR+LG+ + Q LF YF +E V+K+AKR G ++ GI+ L+ S V ++ R L GA++ V++DR + W++ L Y + ++
Sbjct: 127 KDYSQMTKFLNRLLGLNVELQNALFKYFSDTMEAVIKDAKRSGRYDSGIIDLS--SDVGNVQRVNDTDYYLKSSSGAIKIQLHNVSIDRGMSWDQALTSYKNSCLE 230
BLAST of mRNA_D-mesarthrocarpus_Contig92.1.1 vs. uniprot
Match: V4A495_LOTGI (Helicase_C_4 domain-containing protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4A495_LOTGI) HSP 1 Score: 65.1 bits (157), Expect = 6.710e-8 Identity = 33/95 (34.74%), Postives = 54/95 (56.84%), Query Frame = 1
Query: 184 KDNSLVKTFLNRMLGMTIRAQTFLFDYFHAVLENVVKEAKRDGTFEDGILCLTGRSCVVDIPRPLTLPQELSVEDGAVRSMYVTVDRSIPWEEIL 468
KD V FLNR+LG+ + Q +F+YF ++ ++K AK++G + +G+L +T S + I +P + LS G +S + VDR + WE L
Sbjct: 31 KDAGDVSKFLNRILGLAVEKQNLIFNYFTEAMKVIIKNAKKEGRYNEGMLDITATSIQL-IGKPTEIFSNLSRGHGTTQSALLKVDRGMSWEAAL 124
BLAST of mRNA_D-mesarthrocarpus_Contig92.1.1 vs. uniprot
Match: A0A834RF00_SARSC (Protein strawberry notch n=2 Tax=Sarcoptes scabiei TaxID=52283 RepID=A0A834RF00_SARSC) HSP 1 Score: 65.5 bits (158), Expect = 7.590e-8 Identity = 56/219 (25.57%), Postives = 98/219 (44.75%), Query Frame = 1
Query: 184 KDNSLVKTFLNRMLGMTIRAQTFLFDYFHAVLENVVKEAKRDGTFEDGILCLTGRSCVVDIPRPLTLPQE---LSVEDGAVRSMYVTV--DRSIPWEEILPMYHEAKIQSEKLLKLAVERHNAMKGARGLYKSNH-LKAPKESLTGFWKNKNVNNGIHYVLLSIDYQIAQSDNFTGLTKGMSVFSPVTGQRIE-ANRDIFASRRKRVTSLEEAEMLWRQ 819
KD + + FLNR+LG+ + Q LF YF+ +E ++K+AKR G ++ GI+ L+ V+ L QE ++ +GA++ TV DR + WE ++E + K A+E+ + + G Y SN + K +N N N I + ++ P G +++ + R ++ +LE+A LWR+
Sbjct: 1167 KDYANINKFLNRILGLEVELQNSLFRYFNDTMETLIKQAKRSGRYDSGIIDLSSEVGNVE-----NLNQENFLMNASNGAIKIQLHTVLIDRGLTWE-----------RAENMYKQAIEQDDYFRAEIGFYVSNSTFQIRKTIFLAIPENPNKNKDIKQIF--------------------RIYKPSLGLQVKYETKSSLKERGTKLDNLEQAAALWRE 1349
BLAST of mRNA_D-mesarthrocarpus_Contig92.1.1 vs. uniprot
Match: A0A7R9KDW2_9ACAR (Hypothetical protein n=1 Tax=Medioppia subpectinata TaxID=1979941 RepID=A0A7R9KDW2_9ACAR) HSP 1 Score: 64.7 bits (156), Expect = 1.440e-7 Identity = 36/106 (33.96%), Postives = 59/106 (55.66%), Query Frame = 1
Query: 184 KDNSLVKTFLNRMLGMTIRAQTFLFDYFHAVLENVVKEAKRDGTFEDGILCLTGRSCVVDIPRPLTLPQELSVEDGAVRSMY--VTVDRSIPWEEILPMYHEAKIQ 495
KD S + FLNR+LG+ + Q LF YF +E V+K+AKR G ++ GI+ L+ S V ++ R L GA++ V++DR + W++ L Y + ++
Sbjct: 2169 KDYSQMTKFLNRLLGLNVELQNALFKYFSDTMEAVIKDAKRSGRYDSGIIDLS--SDVGNVQRVNDTDYYLKSSSGAIKIQLHNVSIDRGMSWDQALTSYKNSCLE 2272
BLAST of mRNA_D-mesarthrocarpus_Contig92.1.1 vs. uniprot
Match: A0A8J2WWD9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWD9_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 2.340e-7 Identity = 44/159 (27.67%), Postives = 66/159 (41.51%), Query Frame = 1
Query: 13 RELKAWNKTTHDVDNEVCGGHASFTEAAAVWLTSVGIEATKQANAANIRVSKRSFNSKDNSLVKTFLNRMLGMTIRAQTFLFDYFHAVLENVVKEAKRDGTFEDGILCLTGRSCVVDIPRPLTLPQELSVEDGAVRSMYVTVDRSIPWEEILPMYHEAK 489
R K W+ + + A +WL+ VGI A + R ++V FLNR+LG+ + Q LFDYF LE +++ AKRDG + GI + GRS V+ RP + + V D + +E M E +
Sbjct: 921 RAPKGWDDELYGGGVDAVAAKIHMLHGAPLWLSLVGIAVASYEGAGSAR----------KAVVPKFLNRILGLEVSRQQKLFDYFARTLERMIRAAKRDGKYAQGIQTVDGRS--VEFERPAKALHVTTPSPFPIECHTVVADVGMDFETAQKMLEETR 1067
BLAST of mRNA_D-mesarthrocarpus_Contig92.1.1 vs. uniprot
Match: A0A0K0FW75_STRVS (Protein strawberry notch homolog 2 (inferred by orthology to a human protein) n=2 Tax=Strongyloides TaxID=6247 RepID=A0A0K0FW75_STRVS) HSP 1 Score: 62.8 bits (151), Expect = 5.570e-7 Identity = 34/96 (35.42%), Postives = 57/96 (59.38%), Query Frame = 1
Query: 184 KDNSLVKTFLNRMLGMTIRAQTFLFDYFHAVLENVVKEAKRDGTFEDGILCL-TGRSCVVDIPRPLTLPQELSVEDGAVRSMYVTVDRSIPWEEIL 468
+D + + FLNR+LG+ + AQ LF+YF +LE ++++AK DGT++ GI+ + TG + V + T +L+ V + V+R + WEE L
Sbjct: 1141 RDGNSIAKFLNRLLGLPVHAQNALFEYFTLILEELIRQAKYDGTYDMGIMDVGTGENKVQRL-ETRTFTGKLNYNTFRVEMHKIGVERGMSWEEAL 1235
BLAST of mRNA_D-mesarthrocarpus_Contig92.1.1 vs. uniprot
Match: T1KFC2_TETUR (Uncharacterized protein n=2 Tax=Tetranychus urticae TaxID=32264 RepID=T1KFC2_TETUR) HSP 1 Score: 62.8 bits (151), Expect = 5.580e-7 Identity = 37/106 (34.91%), Postives = 53/106 (50.00%), Query Frame = 1
Query: 184 KDNSLVKTFLNRMLGMTIRAQTFLFDYFHAVLENVVKEAKRDGTFEDGILCLTGRSCVVDIPRPLTLPQELSVEDGAVRSMYVTVDRSIPWEEILPMYHEAKIQSE 501
KD ++ FLNR+LG+ + Q LF YF L+ VVK+AKR G ++ GI+ LT VD T ++ S + V V+R + WEE + K E
Sbjct: 1184 KDYQVIAKFLNRILGLPVELQNALFQYFSDTLDAVVKQAKRLGRYDLGIMDLTSEIGKVDRIEHRTFIRKHSTGVAKIELHVVKVERGMSWEEAHSLVRHCKTPEE 1289 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig92.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig92.1.1 >prot_D-mesarthrocarpus_Contig92.1.1 ID=prot_D-mesarthrocarpus_Contig92.1.1|Name=mRNA_D-mesarthrocarpus_Contig92.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=357bp NERSRELKAWNKTTHDVDNEVCGGHASFTEAAAVWLTSVGIEATKQANAAback to top mRNA from alignment at D-mesarthrocarpus_Contig92:4..7297- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig92.1.1 ID=mRNA_D-mesarthrocarpus_Contig92.1.1|Name=mRNA_D-mesarthrocarpus_Contig92.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=7294bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig92:4..7297- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig92:4..7297- >mRNA_D-mesarthrocarpus_Contig92.1.1 ID=mRNA_D-mesarthrocarpus_Contig92.1.1|Name=mRNA_D-mesarthrocarpus_Contig92.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1071bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig92:4..7297- (Discosporangium mesarthrocarpum MT17_79)back to top |