mRNA_D-mesarthrocarpus_Contig9189.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9189.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig9189.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9189.1.1 vs. uniprot
Match: D7FVH2_ECTSI (Myosin I, high molecular weight-Acanthamoeba sp n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVH2_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 8.260e-57
Identity = 103/122 (84.43%), Postives = 107/122 (87.70%), Query Frame = 1
Query:   19 QANPILESFGNAKTVRNDNSSRFGKLITIKFDPMGAISESSLVSYLLEKSRVVFQTQGERNYHIFYQLVAAAEENPKLRDRLQLDGCEAFMYLNQSGVTSIEGVVEEVDFDEVSVALPYLTF 384
            QANPILE+FGNAKTVRNDNSSRFGKLITIKFDPMGAI ES+LVSYLLEKSRVVFQ  GERNYHIFYQLVA A+EN  LRDRL LDGCEAF YLNQSGVT IEG VEEVDFDEV  A+  L F
Sbjct:  151 QANPILEAFGNAKTVRNDNSSRFGKLITIKFDPMGAICESTLVSYLLEKSRVVFQMAGERNYHIFYQLVAGADENQALRDRLMLDGCEAFNYLNQSGVTRIEGQVEEVDFDEVRNAMDTLLF 272          
BLAST of mRNA_D-mesarthrocarpus_Contig9189.1.1 vs. uniprot
Match: A0A6H5JBI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBI4_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 5.320e-56
Identity = 102/122 (83.61%), Postives = 106/122 (86.89%), Query Frame = 1
Query:   19 QANPILESFGNAKTVRNDNSSRFGKLITIKFDPMGAISESSLVSYLLEKSRVVFQTQGERNYHIFYQLVAAAEENPKLRDRLQLDGCEAFMYLNQSGVTSIEGVVEEVDFDEVSVALPYLTF 384
            QANPILE+FGNAKTVRNDNSSRFGKLITI FDPMGAI ES+LVSYLLEKSRVVFQ  GERNYHIFYQLVA A+EN  LRDRL LDGCEAF YLNQSGVT IEG VEEVDFDEV  A+  L F
Sbjct:   83 QANPILEAFGNAKTVRNDNSSRFGKLITITFDPMGAICESTLVSYLLEKSRVVFQMAGERNYHIFYQLVAGADENQALRDRLMLDGCEAFNYLNQSGVTRIEGQVEEVDFDEVRNAMDTLLF 204          
BLAST of mRNA_D-mesarthrocarpus_Contig9189.1.1 vs. uniprot
Match: A0A835YPP0_9STRA (Myosin I, high molecular weight-Acanthamoeba sp n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPP0_9STRA)

HSP 1 Score: 179 bits (453), Expect = 2.110e-49
Identity = 91/122 (74.59%), Postives = 105/122 (86.07%), Query Frame = 1
Query:   19 QANPILESFGNAKTVRNDNSSRFGKLITIKFDPMGAISESSLVSYLLEKSRVVFQTQGERNYHIFYQLVAAAEENPKLRDRLQLDGCEAFMYLNQSGVTSIEGVVEEVDFDEVSVALPYLTF 384
            QANPILE+FGNAKTVRN+NSSRFGKLIT+KFD +GAI ES++VSYLLEKSRVV Q+  ERNYHIFY+LVAAAEE+P L  +L+LD CEAF YL+QSGVT IEGVV+E DFDEV  A+  L F
Sbjct:  198 QANPILEAFGNAKTVRNNNSSRFGKLITVKFDRLGAICESTVVSYLLEKSRVVHQSANERNYHIFYELVAAAEEDPSLCAQLRLDSCEAFAYLSQSGVTRIEGVVDENDFDEVCNAMDILNF 319          
BLAST of mRNA_D-mesarthrocarpus_Contig9189.1.1 vs. uniprot
Match: A0A835YVK9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVK9_9STRA)

HSP 1 Score: 175 bits (444), Expect = 1.060e-48
Identity = 89/122 (72.95%), Postives = 105/122 (86.07%), Query Frame = 1
Query:   19 QANPILESFGNAKTVRNDNSSRFGKLITIKFDPMGAISESSLVSYLLEKSRVVFQTQGERNYHIFYQLVAAAEENPKLRDRLQLDGCEAFMYLNQSGVTSIEGVVEEVDFDEVSVALPYLTF 384
            Q +PIL++FG+ KTVRN+NSSRFGKLITIKFD +GAI ES++VSYLLEKSRVV Q+ GERNYHIFY+LVAAAEE+P LR +L+LD CEAF YL+QSGVT IEGVV+E DFDEV  A+  L F
Sbjct:    3 QPHPILKAFGDVKTVRNNNSSRFGKLITIKFDRLGAICESTVVSYLLEKSRVVHQSAGERNYHIFYELVAAAEEDPALRTQLKLDSCEAFAYLSQSGVTRIEGVVDENDFDEVRNAMNILNF 124          
BLAST of mRNA_D-mesarthrocarpus_Contig9189.1.1 vs. uniprot
Match: A0A7R9YCN6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCN6_9STRA)

HSP 1 Score: 155 bits (393), Expect = 2.160e-41
Identity = 78/122 (63.93%), Postives = 96/122 (78.69%), Query Frame = 1
Query:   19 QANPILESFGNAKTVRNDNSSRFGKLITIKFDPMGAISESSLVSYLLEKSRVVFQTQGERNYHIFYQLVAAAEENPKLRDRLQLDGCEAFMYLNQSGVTSIEGVVEEVDFDEVSVALPYLTF 384
            QANPI+ESFGNAKT+RN+NSSRFGKLI+I FD  G+I   S++ YLLEKSR+VFQTQGERNYHIFYQL+A  E N  L+  L LD  E F YL+QSGVT I+GV +E +F+++S A+  L F
Sbjct:  225 QANPIMESFGNAKTLRNNNSSRFGKLISINFDGTGSIRGGSIIEYLLEKSRIVFQTQGERNYHIFYQLLAGGEANLSLKSHLGLDLPETFHYLDQSGVTVIDGVNDEKEFEDISNAMDVLNF 346          
BLAST of mRNA_D-mesarthrocarpus_Contig9189.1.1 vs. uniprot
Match: A0A812RZ32_SYMMI (MhcA protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RZ32_SYMMI)

HSP 1 Score: 144 bits (364), Expect = 2.280e-40
Identity = 72/120 (60.00%), Postives = 92/120 (76.67%), Query Frame = 1
Query:   22 ANPILESFGNAKTVRNDNSSRFGKLITIKFDPMGAISESSLVSYLLEKSRVVFQTQGERNYHIFYQLVAAAEENPKLRDRLQLDGCEAFMYLNQSGVTSIEGVVEEVDFDEVSVALPYLT 381
            ANPILE+FGNAKT+RN+NSSRFGKLIT+ FD  G I    +++YLLEKSRVV QT+GERNYHIFYQL+AA + N +L+ RL L   E F +  QSGV  I+GV +E ++D+V V++ Y T
Sbjct:  125 ANPILEAFGNAKTLRNNNSSRFGKLITVNFDSNGGIIGGGIINYLLEKSRVVGQTKGERNYHIFYQLLAAGDANEELQRRLHLQDPELFNFTGQSGVIHIDGVSDEKEYDDVRVSIHYPT 244          
BLAST of mRNA_D-mesarthrocarpus_Contig9189.1.1 vs. uniprot
Match: A0A7S0XE81_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XE81_9STRA)

HSP 1 Score: 142 bits (358), Expect = 1.560e-39
Identity = 72/121 (59.50%), Postives = 91/121 (75.21%), Query Frame = 1
Query:   22 ANPILESFGNAKTVRNDNSSRFGKLITIKFDPMGAISESSLVSYLLEKSRVVFQTQGERNYHIFYQLVAAAEENPKLRDRLQLDGCEAFMYLNQSGVTSIEGVVEEVDFDEVSVALPYLTF 384
            ANPILE+ GNAKT+RN+NSSRFGKLIT+ FD  G+I   S+++YLLEKSRVV QT+GERNYHIFYQL++ A  NP+L   L+L   E F +  QSGV  I+GV +E DF++V  +L  L F
Sbjct:  130 ANPILEALGNAKTLRNNNSSRFGKLITVNFDKNGSIIGGSIINYLLEKSRVVGQTKGERNYHIFYQLLSQATTNPQLTSELKLQDPELFSFTGQSGVIHIDGVSDEKDFEDVQNSLNILRF 250          
BLAST of mRNA_D-mesarthrocarpus_Contig9189.1.1 vs. uniprot
Match: A0A7S1UHJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHJ9_9STRA)

HSP 1 Score: 142 bits (359), Expect = 3.540e-38
Identity = 70/117 (59.83%), Postives = 91/117 (77.78%), Query Frame = 1
Query:   34 LESFGNAKTVRNDNSSRFGKLITIKFDPMGAISESSLVSYLLEKSRVVFQTQGERNYHIFYQLVAAAEENPKLRDRLQLDGCEAFMYLNQSGVTSIEGVVEEVDFDEVSVALPYLTF 384
            +E+FGNAKT+RN+NSSRFGKLI+++FD  G IS  S++ YLLEKSR+VFQ  GERNYHIFYQL+A  E N  ++ RL LD  E F YL+QSGVT IEG+ +E +F++V+ A+  L F
Sbjct:    1 MEAFGNAKTLRNNNSSRFGKLISVRFDGNGCISGGSIIEYLLEKSRIVFQADGERNYHIFYQLLAGGEANLPMKTRLVLDHPETFHYLDQSGVTHIEGLSDEKEFEDVNGAMDTLNF 117          
BLAST of mRNA_D-mesarthrocarpus_Contig9189.1.1 vs. uniprot
Match: A0A7S1XXK5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXK5_9STRA)

HSP 1 Score: 142 bits (359), Expect = 9.030e-38
Identity = 70/117 (59.83%), Postives = 91/117 (77.78%), Query Frame = 1
Query:   34 LESFGNAKTVRNDNSSRFGKLITIKFDPMGAISESSLVSYLLEKSRVVFQTQGERNYHIFYQLVAAAEENPKLRDRLQLDGCEAFMYLNQSGVTSIEGVVEEVDFDEVSVALPYLTF 384
            +E+FGNAKT+RN+NSSRFGKLI+++FD  G IS  S++ YLLEKSR+VFQ  GERNYHIFYQL+A  E N  ++ RL LD  E F YL+QSGVT IEG+ +E +F++V+ A+  L F
Sbjct:    1 MEAFGNAKTLRNNNSSRFGKLISVRFDGNGCISGGSIIEYLLEKSRIVFQADGERNYHIFYQLLAGGEANLPMKTRLVLDHPETFHYLDQSGVTHIEGLSDEKEFEDVNGAMDTLNF 117          
BLAST of mRNA_D-mesarthrocarpus_Contig9189.1.1 vs. uniprot
Match: F0Y7V6_AURAN (Myosin motor domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y7V6_AURAN)

HSP 1 Score: 140 bits (354), Expect = 3.350e-36
Identity = 66/113 (58.41%), Postives = 87/113 (76.99%), Query Frame = 1
Query:   19 QANPILESFGNAKTVRNDNSSRFGKLITIKFDPMGAISESSLVSYLLEKSRVVFQTQGERNYHIFYQLVAAAEENPKLRDRLQLDGCEAFMYLNQSGVTSIEGVVEEVDFDEV 357
            Q NPILES GNAKT+RN+NSSRFGKLIT+KFD  G +  +S++ YLLEKSRV FQ +GERNYH+FY L+A  ++ PKLR  LQL   + + YL+QSGVT  EG  +E +++++
Sbjct:  171 QTNPILESQGNAKTLRNNNSSRFGKLITVKFDTQGGVVGASIIDYLLEKSRVTFQAEGERNYHVFYMLIAGCKKEPKLRAALQLADPQDYHYLDQSGVTEAEGFNDEAEYEDM 283          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9189.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVH2_ECTSI8.260e-5784.43Myosin I, high molecular weight-Acanthamoeba sp n=... [more]
A0A6H5JBI4_9PHAE5.320e-5683.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YPP0_9STRA2.110e-4974.59Myosin I, high molecular weight-Acanthamoeba sp n=... [more]
A0A835YVK9_9STRA1.060e-4872.95P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7R9YCN6_9STRA2.160e-4163.93Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A812RZ32_SYMMI2.280e-4060.00MhcA protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A7S0XE81_9STRA1.560e-3959.50Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A7S1UHJ9_9STRA3.540e-3859.83Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S1XXK5_9STRA9.030e-3859.83Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
F0Y7V6_AURAN3.350e-3658.41Myosin motor domain-containing protein (Fragment) ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9189contigD-mesarthrocarpus_Contig9189:2523..3678 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FVH2
Preferred nameMyo22
PFAMsFERM_M,IQ,MyTH4,Myosin_head,RA
Model size414
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.35e-57
EggNOG OGsCOG5022@1|root,KOG4229@2759|Eukaryota
Descriptionmotor activity
Cds size414
COG categoryZ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791072.6027079-CDS-D-mesarthrocarpus_Contig9189:2522..28011680791072.6027079-CDS-D-mesarthrocarpus_Contig9189:2522..2801Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9189 2523..2801 -
1680791072.613981-CDS-D-mesarthrocarpus_Contig9189:3543..36781680791072.613981-CDS-D-mesarthrocarpus_Contig9189:3543..3678Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9189 3544..3678 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9189.1.1prot_D-mesarthrocarpus_Contig9189.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9189 2523..3678 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9189.1.1

>prot_D-mesarthrocarpus_Contig9189.1.1 ID=prot_D-mesarthrocarpus_Contig9189.1.1|Name=mRNA_D-mesarthrocarpus_Contig9189.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=138bp
MYLCFPQANPILESFGNAKTVRNDNSSRFGKLITIKFDPMGAISESSLVS
YLLEKSRVVFQTQGERNYHIFYQLVAAAEENPKLRDRLQLDGCEAFMYLN
QSGVTSIEGVVEEVDFDEVSVALPYLTFFLFLLVMGT*
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mRNA from alignment at D-mesarthrocarpus_Contig9189:2523..3678-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9189.1.1 ID=mRNA_D-mesarthrocarpus_Contig9189.1.1|Name=mRNA_D-mesarthrocarpus_Contig9189.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1156bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9189:2523..3678- (Discosporangium mesarthrocarpum MT17_79)
ATGTACCTGTGCTTCCCTCAGGCTAACCCGATCCTGGAGTCCTTTGGGAA TGCAAAGACAGTGAGGAATGATAACTCCTCACGGTTCGGCAAACTGATCA CTATCAAGTTCGACCCCATGGGAGCCATCTCAGAGGTACGGCCTACGGAC AGTTGCGGCCCCTGTCCCCCCCCGCAACCCGTAACCTAAACCCCAGCCCC GAATATTGGGTGGTTCGTTGGTACCTTGGAGCACCTGGCTTTTTTTGACC CCCGGCCATGCGAGTGTGAATTGTTCGGGTCATTGCCATAGACGGGCACG TAGTGTGTGTGTGTGTGTGGGTTGGTTATCATGTCGTTGCTGTACGCGCA TGTGCTACGTGAGTTGGTTGTTACGTCATTGCTGTACATGGGCACGTTGT GTATGTGTGTAGTGAAGGTGCATATTAGCCGTGGGGCTCGACCGCTGCTG TGTCCCATGCCCATGAATAGGTACTATTTATAGGTAATCTGTGTAGTTAA TATTTGTTGATAAGACATGTTCTTCTAAGTGTCTCTAGCAAATGTATTCA TTAACCACGGGGCTCAACTTCCACCAGAATTGGGAGGAGAGAGCATTGCT GCTAAAACATCCCAGGTGCACAGCATATTCCTTGCTGAGTCTTGTTTGAA AAAGCAAGGGACAGGCAGGATATTGATTCTGTATGGATACTGTACTTGCA CCAAGGCCAACTCCCCCGCATCTCCGCTTCTAGAGTTAAGACTTTGATCT ATTCACTGTTAACTCTCCCCCCCTCCCTGCCCGCCAGCCCACACTCCCTC CCCACAGCCGCCACCCAACCCACCCAACCCCTCGCCACCCCCCCCCCCAC ATTTGTGCTTCCTCCTTCATGGGAAAGTCCTCCCTGGTGTCCTACCTGCT GGAGAAGAGTCGAGTGGTCTTCCAGACCCAGGGGGAACGTAACTATCACA TATTCTACCAGCTGGTAGCCGCTGCGGAGGAGAACCCCAAACTCCGGGAC CGGTTGCAGCTGGATGGGTGTGAGGCCTTCATGTACCTGAACCAGTCCGG GGTCACAAGCATTGAGGGGGTGGTGGAGGAGGTGGACTTTGACGAGGTAA GTGTCGCCTTGCCATACCTTACCTTTTTTCTTTTCCTTCTTGTGATGGGT ACCTGA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9189:2523..3678-

>mRNA_D-mesarthrocarpus_Contig9189.1.1 ID=mRNA_D-mesarthrocarpus_Contig9189.1.1|Name=mRNA_D-mesarthrocarpus_Contig9189.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=414bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9189:2523..3678- (Discosporangium mesarthrocarpum MT17_79)
ATGTACCTGTGCTTCCCTCAGGCTAACCCGATCCTGGAGTCCTTTGGGAA
TGCAAAGACAGTGAGGAATGATAACTCCTCACGGTTCGGCAAACTGATCA
CTATCAAGTTCGACCCCATGGGAGCCATCTCAGAGTCCTCCCTGGTGTCC
TACCTGCTGGAGAAGAGTCGAGTGGTCTTCCAGACCCAGGGGGAACGTAA
CTATCACATATTCTACCAGCTGGTAGCCGCTGCGGAGGAGAACCCCAAAC
TCCGGGACCGGTTGCAGCTGGATGGGTGTGAGGCCTTCATGTACCTGAAC
CAGTCCGGGGTCACAAGCATTGAGGGGGTGGTGGAGGAGGTGGACTTTGA
CGAGGTAAGTGTCGCCTTGCCATACCTTACCTTTTTTCTTTTCCTTCTTG
TGATGGGTACCTGA
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