mRNA_D-mesarthrocarpus_Contig917.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig917.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig917.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig917.1.1 vs. uniprot
Match: D8LDU1_ECTSI (Carnitine/acylcarnitine carrier protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU1_ECTSI)

HSP 1 Score: 362 bits (930), Expect = 2.270e-124
Identity = 175/227 (77.09%), Postives = 196/227 (86.34%), Query Frame = 1
Query:    1 MGGGGEGGSAIKDILAGTVAGFAQVAVGHPLDTIKVRLQTQSSVNPEFTGMVDCFRQTMVKEGVAGLYAGAASPLIGAMAHNAVVFFSYGLSKKIVSGGKELAPFQYYMAGSLAAVPISLIEAPVDLFKIKLQAQVGKGEYEGVIDAGRKIVGVYGVKGAFQGLGATMLRNVPCFGAYFFCFENVKRSLTKAGEQSSLPACFVAGGSAGAGFWGVWYPFETIKTRMQ 681
            MGG G GGSA+KDI++GTVAGFAQVAVGHPLDTIKVRLQTQSS NPEF+GMVDCFR+TM +EG +GLYAGAA+PL GAMAHNA VFFSYG+SKKIV GGKEL   QYY AGSLAA+PIS++EAPVDLFKIKLQAQVGKGEY+GV D GRKI   YG+KGA+QG  A +LRN+PCFGAYFFCFE  K++ TK GEQ SL  CF  G +AGAGFWGVWYP ET+KTRMQ
Sbjct:    1 MGGDGGGGSALKDIMSGTVAGFAQVAVGHPLDTIKVRLQTQSSTNPEFSGMVDCFRKTMAREGASGLYAGAAAPLWGAMAHNAGVFFSYGMSKKIVGGGKELTIPQYYAAGSLAAIPISVVEAPVDLFKIKLQAQVGKGEYDGVFDCGRKIFKSYGIKGAYQGFSAVLLRNIPCFGAYFFCFEGTKQAFTKPGEQPSLTTCFAGGAAAGAGFWGVWYPLETLKTRMQ 227          
BLAST of mRNA_D-mesarthrocarpus_Contig917.1.1 vs. uniprot
Match: A0A835Z5H4_9STRA (Carnitine/acylcarnitine carrier protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5H4_9STRA)

HSP 1 Score: 327 bits (838), Expect = 2.640e-110
Identity = 156/227 (68.72%), Postives = 192/227 (84.58%), Query Frame = 1
Query:    1 MGGGGEGGSAIKDILAGTVAGFAQVAVGHPLDTIKVRLQTQSSVNPEFTGMVDCFRQTMVKEGVAGLYAGAASPLIGAMAHNAVVFFSYGLSKKIVSGGKELAPFQYYMAGSLAAVPISLIEAPVDLFKIKLQAQVGKGEYEGVIDAGRKIVGVYGVKGAFQGLGATMLRNVPCFGAYFFCFENVKRSLTKAGEQSSLPACFVAGGSAGAGFWGVWYPFETIKTRMQ 681
            MGGGG+ GSAIKDIL+GTVAG AQV  GHPLDTIKVRLQTQSS NPEF+GM DC R+T+ +EG+ GLYAGAASPL+GAMAHNA VFFSYG++K IV GGKEL+  QYY+AGSLAA+PI+++E+PVD FKI+LQAQVG+G+Y+GV D  +++    G++G +QG  A+++RNVPCFGAYFF FE  K +LTK GE+ +L  CFVAGG+AG GFWG+WYP ETIKTR+Q
Sbjct:    1 MGGGGDSGSAIKDILSGTVAGIAQVVAGHPLDTIKVRLQTQSSTNPEFSGMGDCIRKTIQREGLMGLYAGAASPLLGAMAHNAGVFFSYGMAKDIVGGGKELSIPQYYLAGSLAAIPITIVESPVDFFKIQLQAQVGEGKYKGVADCAKQVYASQGIRGVYQGGVASLMRNVPCFGAYFFSFEATKAALTKKGEEPTLATCFVAGGAAGFGFWGLWYPLETIKTRIQ 227          
BLAST of mRNA_D-mesarthrocarpus_Contig917.1.1 vs. uniprot
Match: A0A6B2LCD6_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LCD6_9EUKA)

HSP 1 Score: 251 bits (642), Expect = 1.150e-80
Identity = 123/221 (55.66%), Postives = 160/221 (72.40%), Query Frame = 1
Query:   43 LAGTVAGFAQVAVGHPLDTIKVRLQTQSSVN---PEFTGMVDCFRQTMVKEGVAGLYAGAASPLIGAMAHNAVVFFSYGLSKKIVSGGK-----ELAPFQYYMAGSLAAVPISLIEAPVDLFKIKLQAQVGKGEYEGVIDAGRKIVGVYGVKGAFQGLGATMLRNVPCFGAYFFCFENVKRSLTKAGEQSSLPACFVAGGSAGAGFWGVWYPFETIKTRMQ 681
            ++GT+ G AQV  GHPLDT+KVRLQTQ  V    P+F GM+DCF++T+  EG  GLY GA SPL GAMAHNA +FF YG SKKIV+  K     +L P  Y+ AG++    ++++E PVDL K KLQAQVGKG+Y GV D  +++  + G++G +QGL AT LRNVPCF +YF+ FE VK+ LTK GE+ +L   F+AGG+AG GFWG+WYP + IKTR+Q
Sbjct:    1 MSGTMGGVAQVLAGHPLDTVKVRLQTQVPVPGQPPQFNGMIDCFKKTVQHEGFKGLYKGAMSPLAGAMAHNAGIFFFYGQSKKIVAAKKNIHLADLTPKDYFTAGAMTGFCVNIVECPVDLLKCKLQAQVGKGQYAGVWDCFKQLYRLRGIQGVYQGLPATTLRNVPCFASYFYAFEMVKQFLTKKGEKPTLSTIFLAGGAAGFGFWGIWYPLDIIKTRLQ 221          
BLAST of mRNA_D-mesarthrocarpus_Contig917.1.1 vs. uniprot
Match: A0A2R5GTK5_9STRA (Mitochondrial substrate carrier family protein G n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GTK5_9STRA)

HSP 1 Score: 244 bits (624), Expect = 9.220e-78
Identity = 133/233 (57.08%), Postives = 164/233 (70.39%), Query Frame = 1
Query:   13 GEGGSAIKDILAGTVAGFAQVAVGHPLDTIKVRLQTQSSVNPE----FTGMVDCFRQTMVKEGVAGLYAGAASPLIGAMAHNAVVFFSYGLSKKIVSGGKELAP--FQYYMAGSLAAVPISLIEAPVDLFKIKLQAQVGKGEYEGVIDAGRKIVGVYGVKGAFQGLGATMLRNVPCFGAYFFCFENVKRSLTKAGEQSSLPACF----VAGGSAGAGFWGVWYPFETIKTRMQ 681
            G G + + DI +GT  G AQV  GHPLDTIKVRLQTQ    P+    F GM DC ++T  KEGV+GLY GAASPL+GAMAHNA VFFSYG +K + +G  E+    ++Y++AG++AA+PI+++E PVDL KIKLQAQVG+GEYEGV DA RK+   +GV G +QG+GAT+LRNVPCFG YFF  E   R +   GE +S    F    V G  AG  FWG+ YP ETIKTRMQ
Sbjct:    2 GGGRNTMIDIASGTAGGIAQVVAGHPLDTIKVRLQTQQP-GPDGKMPFAGMADCAKKTFSKEGVSGLYKGAASPLLGAMAHNAGVFFSYGQAKAL-TGANEVGADLYKYWLAGAIAAIPITIVETPVDLLKIKLQAQVGEGEYEGVFDAARKLSKAHGVGGLYQGVGATLLRNVPCFGLYFFGSEFGFRLVNTPGEPASPQQVFLGGLVGGACAGGMFWGLLYPLETIKTRMQ 232          
BLAST of mRNA_D-mesarthrocarpus_Contig917.1.1 vs. uniprot
Match: A0A8J4PU31_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PU31_9MYCE)

HSP 1 Score: 199 bits (505), Expect = 8.670e-60
Identity = 99/223 (44.39%), Postives = 142/223 (63.68%), Query Frame = 1
Query:   28 AIKDILAGTVAGFAQVAVGHPLDTIKVRLQTQSSVNPEFTGMVDCFRQTMVKEGVAGLYAGAASPLIGAMAHNAVVFFSYGLSKKIVSGG---KELAPFQYYMAGSLAAVPISLIEAPVDLFKIKLQAQVGKGEYEGVIDAGRKIVGVYGVKGAFQGLGATMLRNVPCFGAYFFCFENVKRSLTKAG--EQSSLPACFVAGGSAGAGFWGVWYPFETIKTRMQ 681
            A+KDI+AG++ G  QV  GHPLDTIKVRLQTQS  NP ++G +DC R+T+ +EG  GLY G ASPL+G    N+V+F SYG +K ++ G    +EL+  +  +AG +A + I+ +++PVDLFK ++Q Q  K  Y G++D   KI    G+ G FQGLGAT+LR++P  GAYF  +E  +R     G  E  S     +AG   G  +W + YP + +K+ +Q
Sbjct:   15 ALKDIVAGSIGGIGQVISGHPLDTIKVRLQTQSVTNPVYSGAMDCLRKTVAQEGALGLYKGVASPLVGLSIMNSVMFLSYGQAKNLILGSDKNRELSVAELTLAGCMAGLSIAFVDSPVDLFKSQMQVQTDKSTYNGIMDCASKIWKQRGIPGVFQGLGATLLRDIPANGAYFGAYEITRRYFAGTGRVEDISSTKILIAGAVGGVSYWTLTYPADVVKSSIQ 237          
BLAST of mRNA_D-mesarthrocarpus_Contig917.1.1 vs. uniprot
Match: D3B5I3_POLPP (Mitochondrial substrate carrier family protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B5I3_POLPP)

HSP 1 Score: 194 bits (492), Expect = 7.860e-58
Identity = 104/224 (46.43%), Postives = 145/224 (64.73%), Query Frame = 1
Query:   28 AIKDILAGTVAGFAQVAVGHPLDTIKVRLQTQSSVNPEFTGMVDCFRQTMVKEGVAGLYAGAASPLIGAMAHNAVVFFSYGLSKKIVSG--GKELAPFQYYMAGSLAAVPISLIEAPVDLFKIKLQAQ-VGKGEYEGVIDAGRKIVGVYGVKGAFQGLGATMLRNVPCFGAYFFCFENVKRSLTKAGEQ-SSLPA--CFVAGGSAGAGFWGVWYPFETIKTRMQ 681
            A+KDILAG++ G  QV  GHPLDTIKVRLQTQ    P ++G +DC ++T+ +EG AGLY G ASPL+G    NAV+F SYG +KKI+ G   +EL+  +   AG++A   I+ +E+PVDLFK +LQ Q  G  +Y G++D   KI    GV+G +QGLGAT++R+VP    YF  +E  +R     G++   LPA    +AGG  G  +W + YP + IK+ +Q
Sbjct:   13 ALKDILAGSIGGVGQVFTGHPLDTIKVRLQTQPVGAPLYSGTLDCLKKTIAEEGFAGLYKGVASPLVGLCVMNAVMFLSYGQAKKIIQGDSNRELSVAELTKAGAVAGFTIAFVESPVDLFKSQLQVQYAGNKQYNGLLDCATKIFQQRGVRGIYQGLGATLVRDVPANATYFGVYELSRRFFLSEGQRLEQLPAWKVMLAGGIGGMSYWTLTYPVDVIKSSIQ 236          
BLAST of mRNA_D-mesarthrocarpus_Contig917.1.1 vs. uniprot
Match: UPI000644B470 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644B470)

HSP 1 Score: 194 bits (492), Expect = 9.070e-58
Identity = 104/225 (46.22%), Postives = 142/225 (63.11%), Query Frame = 1
Query:   28 AIKDILAGTVAGFAQVAVGHPLDTIKVRLQTQSSVNPEFTGMVDCFRQTMVKEGVAGLYAGAASPLIGAMAHNAVVFFSYGLSKKIVSG-GKELAPFQYYMAGSLAAVPISLIEAPVDLFKIKLQAQVGKG---EYEGVIDAGRKIVGVYGVKGAFQGLGATMLRNVPCFGAYFFCFENVKRSLTKAGEQ-SSLPA--CFVAGGSAGAGFWGVWYPFETIKTRMQ 681
            AIKDI+AG++ G  QV  GHPLDT+KVRLQTQS  +P ++G +DCF++T+  EG AGLY G  SPL+G    NAV+F +YG +K  +   GKEL   +  MAG +A   I+ +E P DLFK +LQ QV +G   +Y G++D   KI    G++G + GL  TM RNVP   AYF  +E  +R L   G++ S LPA    +AGG  G  +W + YP + IK+ +Q
Sbjct:   15 AIKDIVAGSIGGVGQVITGHPLDTVKVRLQTQSVGSPLYSGTLDCFKKTIANEGFAGLYKGVQSPLVGLCFMNAVMFLAYGQAKSYIQKPGKELTVSELTMAGGVAGATIAFVECPFDLFKSQLQVQVSEGANRQYTGLVDCASKIYKARGIQGIYMGLVPTMARNVPANAAYFGAYELARRMLLDDGQKLSQLPAWKVMLAGGIGGMSYWTLTYPIDVIKSSIQ 239          
BLAST of mRNA_D-mesarthrocarpus_Contig917.1.1 vs. uniprot
Match: F0ZBC0_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZBC0_DICPU)

HSP 1 Score: 185 bits (470), Expect = 1.690e-54
Identity = 99/226 (43.81%), Postives = 142/226 (62.83%), Query Frame = 1
Query:   28 AIKDILAGTVAGFAQVAVGHPLDTIKVRLQTQSSVNPEFTGMVDCFRQTMVKEGVAGLYAGAASPLIGAMAHNAVVFFSYGLSKKIVSG---GKELAPFQYYMAGSLAAVPISLIEAPVDLFKIKLQAQVG-KGEYEGVIDAGRKIVGVYGVKGAFQGLGATMLRNVPCFGAYFFCFENVKRSLTKAG----EQSSLPACFVAGGSAGAGFWGVWYPFETIKTRMQ 681
            A+KDI+AG+V G  QV  GHPLDTIKVRLQTQ   NP ++G +DC R+T+ +EG  GLY G ASPL+G    N+V+F +YG +K ++      K+L+   +  AG+LA V IS +++PVDLFK ++Q Q G K ++    D  R+I  + GV+G FQGLGAT +R++P    YF  +E V++    A     +Q S      AGG+ G  +W + YP + +K+ MQ
Sbjct:   13 ALKDIVAGSVGGIGQVFTGHPLDTIKVRLQTQPVGNPIYSGTMDCLRKTIQQEGFMGLYKGVASPLVGLSIMNSVMFLAYGQAKTVIQSLDPTKQLSIGGFTAAGALAGVAISFVDSPVDLFKSQMQVQSGEKKQFSSTSDCARQIWKIGGVRGVFQGLGATFVRDIPANAFYFGAYEYVRKVFATANNINVDQLSSLQIMAAGGAGGVSYWTLSYPADVVKSTMQ 238          
BLAST of mRNA_D-mesarthrocarpus_Contig917.1.1 vs. uniprot
Match: F4QC21_CAVFA (Mitochondrial substrate carrier family protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QC21_CAVFA)

HSP 1 Score: 183 bits (464), Expect = 1.240e-53
Identity = 96/224 (42.86%), Postives = 143/224 (63.84%), Query Frame = 1
Query:   25 SAIKDILAGTVAGFAQVAVGHPLDTIKVRLQTQSSVNPEFTGMVDCFRQTMVKEGVAGLYAGAASPLIGAMAHNAVVFFSYGLSKKIVSGG--KELAPFQYYMAGSLAAVPISLIEAPVDLFKIKLQAQVGKGEYEGVIDAGRKIVGVYGVKGAFQGLGATMLRNVPCFGAYFFCFENVKRSLTKAGEQ-SSLPA--CFVAGGSAGAGFWGVWYPFETIKTRMQ 681
            +A KDI+AG+V G AQ+  GHPLDTIKVRLQTQ    P ++G +DC ++T+ +EG  GLY G  SPL+G    NAV+FFSYG +KK + G   +EL+  Q   AG++A + I+ +E+PVDLFK +LQ   G+ ++ G+ D  +KI    G++G +QG  +T++RNVP    YF  +E  +R+  + G+    LP     V+GG  G  +W + +P + IK+ +Q
Sbjct:   13 TAAKDIVAGSVGGVAQLVTGHPLDTIKVRLQTQPVGAPLYSGTMDCLKKTIAQEGFGGLYKGVTSPLVGLCLMNAVMFFSYGQAKKAIQGDSKEELSVEQLAKAGAIAGLTIAFVESPVDLFKSQLQVP-GQTQFNGLADVAKKIYQSRGIRGVYQGFSSTLVRNVPANCCYFASYELARRAFLEPGQLLEDLPTWKVLVSGGIGGMSYWTLTFPIDVIKSSLQ 235          
BLAST of mRNA_D-mesarthrocarpus_Contig917.1.1 vs. uniprot
Match: MCFG_DICDI (Mitochondrial substrate carrier family protein G n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=MCFG_DICDI)

HSP 1 Score: 182 bits (462), Expect = 2.850e-53
Identity = 99/228 (43.42%), Postives = 142/228 (62.28%), Query Frame = 1
Query:   28 AIKDILAGTVAGFAQVAVGHPLDTIKVRLQTQSSVNPEFTGMVDCFRQTMVKEGVAGLYAGAASPLIGAMAHNAVVFFSYGLSKKIV-----SGGKELAPFQYYMAGSLAAVPISLIEAPVDLFKIKLQAQVG-KGEYEGVIDAGRKIVGVYGVKGAFQGLGATMLRNVPC----FGAYFFCFENVKRSLTKAGEQSSLPACFVAGGSAGAGFWGVWYPFETIKTRMQ 681
            A+KDI+AG++ G  QV  GHPLDTIKVRLQTQS  NP ++G +DC ++T+ +EG AGLY G ASPL+G    N+V+F +YG SK ++     +  + L       AG+LA + I  ++APVDLFK ++Q Q G K +Y+   D  ++I  V GV+G FQGLGAT++R++P     FGAY  C + +      +  Q S      AGG+ G  +W + YP + +K+ MQ
Sbjct:   13 ALKDIVAGSIGGVGQVFTGHPLDTIKVRLQTQSVGNPIYSGTMDCLKKTISQEGFAGLYKGVASPLVGLSIMNSVMFLAYGQSKTLIQKLSDNPNEALDLKGLTAAGALAGIAIGFVDAPVDLFKSQMQVQQGDKNQYKSTADCAKQIWKVGGVRGVFQGLGATLVRDIPANACYFGAYELCRDFLASKDNISVNQLSSLQIMAAGGAGGVSYWTLTYPADVVKSTMQ 240          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig917.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDU1_ECTSI2.270e-12477.09Carnitine/acylcarnitine carrier protein n=1 Tax=Ec... [more]
A0A835Z5H4_9STRA2.640e-11068.72Carnitine/acylcarnitine carrier protein n=1 Tax=Tr... [more]
A0A6B2LCD6_9EUKA1.150e-8055.66Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
A0A2R5GTK5_9STRA9.220e-7857.08Mitochondrial substrate carrier family protein G n... [more]
A0A8J4PU31_9MYCE8.670e-6044.39Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
D3B5I3_POLPP7.860e-5846.43Mitochondrial substrate carrier family protein n=1... [more]
UPI000644B4709.070e-5846.22hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
F0ZBC0_DICPU1.690e-5443.81Uncharacterized protein n=1 Tax=Dictyostelium purp... [more]
F4QC21_CAVFA1.240e-5342.86Mitochondrial substrate carrier family protein n=1... [more]
MCFG_DICDI2.850e-5343.42Mitochondrial substrate carrier family protein G n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig917contigD-mesarthrocarpus_Contig917:67..3666 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LDU1
PFAMsMito_carr
Model size681
Max annot lvl2759|Eukaryota
KEGG koko:K15109
KEGG TC2.A.29.8
KEGG Pathwayko04714,map04714
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006810,GO:0006839,GO:0008150,GO:0016020,GO:0016021,GO:0019866,GO:0022857,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031975,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0051179,GO:0051234,GO:0055085
Exons5
Evalue3.72e-125
EggNOG OGsKOG0758@1|root,KOG0758@2759|Eukaryota
Ec32 ortholog descriptioncarnitine/acylcarnitine carrier protein
Ec32 orthologEc-08_003330.1
Descriptionmitochondrial transport
Cds size681
COG categoryU
BRITEko00000,ko00001,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791070.717363-CDS-D-mesarthrocarpus_Contig917:66..1981680791070.717363-CDS-D-mesarthrocarpus_Contig917:66..198Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig917 67..198 -
1680791070.7335198-CDS-D-mesarthrocarpus_Contig917:859..10031680791070.7335198-CDS-D-mesarthrocarpus_Contig917:859..1003Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig917 860..1003 -
1680791070.7477612-CDS-D-mesarthrocarpus_Contig917:1875..19981680791070.7477612-CDS-D-mesarthrocarpus_Contig917:1875..1998Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig917 1876..1998 -
1680791070.7605448-CDS-D-mesarthrocarpus_Contig917:2898..30981680791070.7605448-CDS-D-mesarthrocarpus_Contig917:2898..3098Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig917 2899..3098 -
1680791070.772807-CDS-D-mesarthrocarpus_Contig917:3584..36661680791070.772807-CDS-D-mesarthrocarpus_Contig917:3584..3666Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig917 3585..3666 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig917.1.1prot_D-mesarthrocarpus_Contig917.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig917 67..3666 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig917.1.1

>prot_D-mesarthrocarpus_Contig917.1.1 ID=prot_D-mesarthrocarpus_Contig917.1.1|Name=mRNA_D-mesarthrocarpus_Contig917.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=227bp
MGGGGEGGSAIKDILAGTVAGFAQVAVGHPLDTIKVRLQTQSSVNPEFTG
MVDCFRQTMVKEGVAGLYAGAASPLIGAMAHNAVVFFSYGLSKKIVSGGK
ELAPFQYYMAGSLAAVPISLIEAPVDLFKIKLQAQVGKGEYEGVIDAGRK
IVGVYGVKGAFQGLGATMLRNVPCFGAYFFCFENVKRSLTKAGEQSSLPA
CFVAGGSAGAGFWGVWYPFETIKTRMQ
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mRNA from alignment at D-mesarthrocarpus_Contig917:67..3666-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig917.1.1 ID=mRNA_D-mesarthrocarpus_Contig917.1.1|Name=mRNA_D-mesarthrocarpus_Contig917.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3600bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig917:67..3666- (Discosporangium mesarthrocarpum MT17_79)
ATGGGAGGCGGTGGTGAAGGCGGCAGCGCCATCAAGGACATCCTGGCGGG GACTGTGGCTGGTTTCGCCCAGGTCGCAGTTGGTGAGTTGGGAAGGATTG AGGGAGCGGGCGGTGGTCATTCTTTAGTGAAATTGAGGATTAGAGCAACG CTGTTAAAAGGAGGCAACTTCATGGCATGAAAACTAACCTGGCGTTGCCG AACAAAGTAGGTGGTAAGTCGCATCCGACAGGCAATAATTCGAATTGTCA TGAGCCCTGTAGGGCACTGAGACGATCCGCGTGTGGGCTACCTGCTCTGT TCCACCGTCATTACCGTTCTAGTCAACTGACTACTGTATTGTAACATGGC TGCATATTGGGATGTGACGCTCTCGCTTCCTTTCATGCACCCCTTACGCC ACGACAATCGCCACGTACTCGTTTTCTTGTTGGCATCTGAGTAGCCTACC CTGCCCATACGCACGCCGTGTCCACCAATCAAGGAACTCATTCACTCGAG TTCTTATCCTTCGTGTGGCCTGATAACCCCTGGCCCCTCTTCCCTCTCCC ACGCGTGCCTCCTGGCAGGACACCCTCTGGACACTATCAAGGTGCGACTC CAGACGCAGTCTTCGGTCAACCCCGAGTTCACCGGTATGGTCGACTGCTT TCGTCAGACCATGGTCAAGGAGGGAGTCGCTGGCCTTTACGCCGGCGCCG CCTCCCCTCTCATTGGTGCCATGGCACACAATGCTGTGGTGTTTTTCAGC TATGGACTTTCGAAGAAGGTGGGTAAGCTTGCGGTTAATCAGGGGAGACA TCATCTGCGGGCGGGTGGGGGAGCAGGGATGTTGTTTGAGGGCATATTCA CATGGCGCTTGCGCTTTGTTTACCCATATGCGGTTTCGGAACAGGAAGTC GTAAAGGAAGAGGCCATCCTCGGGTCGAGGGCAACACGGGACTTTTGTAT GTTTTAAAGAGCGTTCCTGAAGGTGTCGGTTTCACTCTCTGCCCTAGTGG AACAATGTTTTTTCCACTCTTCTACTTAGTGACATACACCCCGCTCATGT GATATTGTCTTTATGACATTGGTAGGGTAGGGGGATTTGTTTTGCATGAC ATTGCGACCCCTCACCACCCCCTTTTGTTTCAAACCTAGCTGGTGGGTGC ATCGGGGGAGCAAAGGAAGGTAGTTTGGCGATCGATGTCTTTCAAAAACT AACCCTAACCCTAACCCTAGCTTGGCACTCTACAGTTACTCCTAAGCCCC GTGAACTGCCTGTGTGAGGGTTCTAGAATTCATGGGCAAAAACAGAAAAT TAGTGCTCCCACCCACTTCTCCTTCGTGGTAGTCATTCTGAAAAAAAAGA AGAAAAGAAAAGAGTCGGGGACTGAAACCCGCAGAGGCGACCGACACATC CTGCCAGGGTGGACCTTAACCCTGCTTTTCTTCAGCAGAACCTAACCTGG ACTTTATGGTAAGGGCTAGAGTAATGAGTAGTTGCTGAGAAGGGCTGCAG GCTCCATGCGGGCTGCACTTTGCACCAGGGTGAGAGGTGACTTGATGGCA GTACCTCTTCCTGCCTTTTGCCCTGCTTGCTACAATTGAAAAAATCGCCT CCCTGCCTTTCCCAACCCCCACTCTCGTGGTGGATGGACGGACGGACGGA AACAACCAAACATAAAAGATTGTGAGCGGGGGCAAGGAGTTGGCCCCCTT TCAATACTACATGGCGGGGTCCCTGGCTGCCGTTCCTATCAGCCTCATCG AGGCCCCCGTGGACCTCTTCAAGATCAAGCTTCAGGCACAGGTGCAGTGG GCACCCCCCCTTGGGTGTTTGGGTTAGGGTGAAGGTTAGGGTTGGCATGC CGCCCAAGCTCTTGGTGGCTTGGGTTAGTGTTAAAGGTTTGGGGTTGGGG TTGGTTAGGTGTTGGCCTCCATCCCCACTTCTGTTGTCAAAGCCCGTGTG GATCTCTTCAAGGTTAGAAGTTTCAGGGACAGAGGTGTGTTTCTTGTGAC TTTGATGACCCAACCACAAACCAACCCCCCAGTCCTAACCTCTAGCCTTA GCCTTTGGAACCAAAGCCCCCTTCAGAGACTTCTGCTACAGTGACGGAAG TTAGGCTTAGGGTTAGGTTTCTTGTACTTTGATTTGCAAATATCAAGGTT TAGGTTTGAGGGGCTAGGGGTCAGGGGTCAGGGTGTGGTGGTATATTTTC CGTAAGTGAAAAGGGGAAGGAGAGGGAAGCATAAGGGTTATAGGGTTGGG TTAGGGTTAGTATGGGGGGTCACTGGTAGCTGGTGATCTGCTCCATTCTG GATTATAACTCCTATAAGACAAGACAGACGGACAGAAATGAGATGAATCC AGCACTCTGTGGTAGAACAGCCACCTTTAGCCCTGCTGCCCTAACCCTTG AACCCCACAACCCTGGCCCTGATCCTAACCCTAAGGTGCGCTGTGAACAG GACAGAAGCGAAGACCGTAACCCTTGACCCTTAACCCTTGATCCCTAACC CTTAACCGCACCTCTTCTTGCCGACCGTTTTTCTCCTTTTTTTTTTCTCT GTAATCATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCGAAAAATCGTCCCTTATTTTCTCTCTGCCAACACCG CCCCTGTTGCCAGGTGGGCAAGGGGGAGTACGAGGGGGTGATCGATGCAG GTAGGAAGATCGTTGGGGTCTATGGCGTCAAGGGGGCCTTCCAGGGCCTG GGGGCCACCATGCTACGGAACGTGCCCTGCTTTGGCGCCTACTTCTTCTG CTTTGAGGTCAGAGGGTTGGGCCTGAGGTCTCGTGCAGCGCCTTGAGCTT TTTTGTGTGTAGGGGTAAGGGGTTCAAGGGCTAGGGTTAAGGGTTTGCAA AATGTAATGCTTTTTACAAATATTTTTTGCATGTTTTTTTTACAAAAGTC GGTGAGTGGGAAGCCGGGGGACCCCTTCTGTTCTGTAAGTGGTACGTGGT CCTCAAAGAGGGCTGTGGTGCTGGTACTGATGCGCAACAACACGGCAGGA TGTGTTCCTGTTCTGCCTGCTGGTGCTCTCTCTCCATGCTTTTAACAGCT CCCCCTCTTTCTTTTTTTTTCTGTCACCCCCCCAGTCGACCTATACAGCC TTATCCCCACCAAGGAGGATGGGCGTTGCTGCATCCCTAACCCCAGCCCT GGCCCTAACCCTGTCCCAGCGTGAAGCCGCTATTTTGTCTCAGGGAAGCT TGGTGATCACGATCATTCCTTTATATCTAACCCTGGGTGACCTTGTAGTC CTAACCCTATCCCCAACCCAACTAACCCCACCCCTGACACATCTCTAACC CCAGCCCCTACCCTAACTCTAACCCCACCCCTTTGTCCCCAGAACGTAAA AAGGGAGCTGACAAATCGTCTCCCTATAACCCTAACCCTAACCCTAACAT TGACCCTAACCACCCCAGAACGTGAAGAGGAGTCTGACCAAGGCAGGTGA ACAGTCCTCACTTCCTGCATGCTTTGTGGCTGGGGGCTCTGCGGGGGCCG GCTTCTGGGGCGTCTGGTACCCATTTGAGACAATCAAGACACGGATGCAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig917:67..3666-

>mRNA_D-mesarthrocarpus_Contig917.1.1 ID=mRNA_D-mesarthrocarpus_Contig917.1.1|Name=mRNA_D-mesarthrocarpus_Contig917.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=681bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig917:67..3666- (Discosporangium mesarthrocarpum MT17_79)
ATGGGAGGCGGTGGTGAAGGCGGCAGCGCCATCAAGGACATCCTGGCGGG
GACTGTGGCTGGTTTCGCCCAGGTCGCAGTTGGACACCCTCTGGACACTA
TCAAGGTGCGACTCCAGACGCAGTCTTCGGTCAACCCCGAGTTCACCGGT
ATGGTCGACTGCTTTCGTCAGACCATGGTCAAGGAGGGAGTCGCTGGCCT
TTACGCCGGCGCCGCCTCCCCTCTCATTGGTGCCATGGCACACAATGCTG
TGGTGTTTTTCAGCTATGGACTTTCGAAGAAGATTGTGAGCGGGGGCAAG
GAGTTGGCCCCCTTTCAATACTACATGGCGGGGTCCCTGGCTGCCGTTCC
TATCAGCCTCATCGAGGCCCCCGTGGACCTCTTCAAGATCAAGCTTCAGG
CACAGGTGGGCAAGGGGGAGTACGAGGGGGTGATCGATGCAGGTAGGAAG
ATCGTTGGGGTCTATGGCGTCAAGGGGGCCTTCCAGGGCCTGGGGGCCAC
CATGCTACGGAACGTGCCCTGCTTTGGCGCCTACTTCTTCTGCTTTGAGA
ACGTGAAGAGGAGTCTGACCAAGGCAGGTGAACAGTCCTCACTTCCTGCA
TGCTTTGTGGCTGGGGGCTCTGCGGGGGCCGGCTTCTGGGGCGTCTGGTA
CCCATTTGAGACAATCAAGACACGGATGCAG
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