mRNA_D-mesarthrocarpus_Contig9162.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9162.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig9162.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9162.2.1 vs. uniprot
Match: D7G3L5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3L5_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 1.450e-45
Identity = 80/91 (87.91%), Postives = 88/91 (96.70%), Query Frame = 1
Query:   16 RVSQIATTVTVSRAFRGQLLSLMATLRATEPHYIKCIKPNNVKAPGGFSSHLVHQQLNYSGVLEVVRIRREAYPGRVPFLEFYERFELLHK 288
            RVSQ+++TVTVS+AFRGQL +LMATLRATEPHYIKCIKPNNVKAPGGFS+HLVHQQLNYSGVLEVVRIRREAYPGR PFLEF+ERFELL +
Sbjct:  935 RVSQMSSTVTVSKAFRGQLQNLMATLRATEPHYIKCIKPNNVKAPGGFSAHLVHQQLNYSGVLEVVRIRREAYPGRTPFLEFFERFELLQR 1025          
BLAST of mRNA_D-mesarthrocarpus_Contig9162.2.1 vs. uniprot
Match: A0A836CBL8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBL8_9STRA)

HSP 1 Score: 150 bits (378), Expect = 4.880e-40
Identity = 76/93 (81.72%), Postives = 79/93 (84.95%), Query Frame = 1
Query:    7 AKNRVSQIATTVTVSRAFRGQLLSLMATLRATEPHYIKCIKPNNVKAPGGFSSHLVHQQLNYSGVLEVVRIRREAYPGRVPFLEFYERFELLH 285
            A  RV  +ATT TVSR FRGQLLSLM TLR TEPHYIKCIKPN VKAPGGFS HLV +QLNYSGVLEVVRIRREAYP RV F EFY+RFELLH
Sbjct:  604 ASGRVHLLATTSTVSRTFRGQLLSLMHTLRNTEPHYIKCIKPNTVKAPGGFSPHLVREQLNYSGVLEVVRIRREAYPVRVSFAEFYDRFELLH 696          
BLAST of mRNA_D-mesarthrocarpus_Contig9162.2.1 vs. uniprot
Match: A0A7S4D7C8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7C8_HETAK)

HSP 1 Score: 112 bits (280), Expect = 4.160e-30
Identity = 53/86 (61.63%), Postives = 68/86 (79.07%), Query Frame = 1
Query:   25 QIATTVTVSRAFRGQLLSLMATLRATEPHYIKCIKPNNVKAPGGFSSHLVHQQLNYSGVLEVVRIRREAYPGRVPFLEFYERFELL 282
            QIA+ ++VS  FR QL  L+A L  TE HY+KC++PNNVKAP GF+SHL+ +QL YSGVLE++RIRREA+P RVP+ EF  RF+ L
Sbjct:   19 QIASQLSVSYLFRSQLSDLVAQLARTETHYVKCLRPNNVKAPDGFNSHLILEQLRYSGVLELIRIRREAFPVRVPYAEFLRRFQAL 104          
BLAST of mRNA_D-mesarthrocarpus_Contig9162.2.1 vs. uniprot
Match: W7TRG2_9STRA (Myosin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRG2_9STRA)

HSP 1 Score: 118 bits (296), Expect = 5.680e-29
Identity = 59/80 (73.75%), Postives = 65/80 (81.25%), Query Frame = 1
Query:   43 TVSRAFRGQLLSLMATLRATEPHYIKCIKPNNVKAPGGFSSHLVHQQLNYSGVLEVVRIRREAYPGRVPFLEFYERFELL 282
            TVS  FR QL  L ATL+ATEPHYIKCIKPN +KA GGFS  LV QQL YSGVLEVVRIRREAYP R+PF +FY RF++L
Sbjct:  768 TVSCTFRRQLEELTATLKATEPHYIKCIKPNAIKAAGGFSPRLVVQQLRYSGVLEVVRIRREAYPTRIPFEDFYRRFDVL 847          
BLAST of mRNA_D-mesarthrocarpus_Contig9162.2.1 vs. uniprot
Match: A0A835ZQ73_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ73_9STRA)

HSP 1 Score: 118 bits (295), Expect = 7.730e-29
Identity = 59/85 (69.41%), Postives = 69/85 (81.18%), Query Frame = 1
Query:   19 VSQIATTVTVSRAFRGQLLSLMATLRATEPHYIKCIKPNNVKAPGGFSSHLVHQQLNYSGVLEVVRIRREAYPGRVPFLEFYERF 273
            V ++A+  TVS+ FR QL SL+  L ATEPHYIKCIKPNN+KAP G+SS LV QQL YSGVLEVVRIRREA+P R+ F+EFY RF
Sbjct:  759 VDKLASASTVSQTFRKQLESLVEQLSATEPHYIKCIKPNNMKAPSGWSSQLVIQQLRYSGVLEVVRIRREAFPTRITFVEFYRRF 843          
BLAST of mRNA_D-mesarthrocarpus_Contig9162.2.1 vs. uniprot
Match: D7G6I1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6I1_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 6.020e-27
Identity = 59/91 (64.84%), Postives = 69/91 (75.82%), Query Frame = 1
Query:   10 KNRVSQIATTVTVSRAFRGQLLSLMATLRATEPHYIKCIKPNNVKAPGGFSSHLVHQQLNYSGVLEVVRIRREAYPGRVPFLEFYERFELL 282
            K   ++IA   TVS AFR QL  L+A LR TEPHYIKCIKPN+ KAPGG++S LV +QL YSGVLEVVRIRREA+P RV + +FY RF  L
Sbjct:  916 KAAFARIAAKSTVSNAFRSQLDDLVAQLRETEPHYIKCIKPNSDKAPGGWTSSLVIEQLRYSGVLEVVRIRREAFPMRVTYKQFYRRFGTL 1006          
BLAST of mRNA_D-mesarthrocarpus_Contig9162.2.1 vs. uniprot
Match: A0A6U0ZTV9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U0ZTV9_9STRA)

HSP 1 Score: 107 bits (267), Expect = 4.610e-25
Identity = 55/93 (59.14%), Postives = 69/93 (74.19%), Query Frame = 1
Query:    4 AAKNRVSQIATTVTVSRAFRGQLLSLMATLRATEPHYIKCIKPNNVKAPGGFSSHLVHQQLNYSGVLEVVRIRREAYPGRVPFLEFYERFELL 282
            AA+N    +  +++VS  FR QL +L  TLR+T+PHYIKC+KPNNVKA G  S HL+ QQL YSGVLEVVRIRREAYP R+ F E ++ F+ L
Sbjct:   83 AAENTKGTMMGSLSVSMRFREQLETLTQTLRSTQPHYIKCVKPNNVKAAGALSPHLIIQQLRYSGVLEVVRIRREAYPTRMRFSELHKVFKTL 175          
BLAST of mRNA_D-mesarthrocarpus_Contig9162.2.1 vs. uniprot
Match: A0A7S1U3H3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3H3_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.250e-24
Identity = 53/93 (56.99%), Postives = 65/93 (69.89%), Query Frame = 1
Query:    4 AAKNRVSQIATTVTVSRAFRGQLLSLMATLRATEPHYIKCIKPNNVKAPGGFSSHLVHQQLNYSGVLEVVRIRREAYPGRVPFLEFYERFELL 282
            A +    Q+A   TVS  FR Q+ +L  TL AT+PHYIKCIKPNNVKA   F   LV QQL Y+GVLEVVRIRRE YP R+ + +FY ++E+L
Sbjct:  251 AKRGNAGQLAGNKTVSLKFRQQVKNLCDTLTATQPHYIKCIKPNNVKAATAFGPRLVAQQLRYAGVLEVVRIRREGYPSRMNYFDFYAKYEML 343          
BLAST of mRNA_D-mesarthrocarpus_Contig9162.2.1 vs. uniprot
Match: A0A485LQX5_9STRA (Aste57867_22874 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQX5_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.430e-23
Identity = 49/91 (53.85%), Postives = 65/91 (71.43%), Query Frame = 1
Query:   10 KNRVSQIATTVTVSRAFRGQLLSLMATLRATEPHYIKCIKPNNVKAPGGFSSHLVHQQLNYSGVLEVVRIRREAYPGRVPFLEFYERFELL 282
            + + S I+ + TV+  F+ QL  LM  L +T PHYIKCIKPNN+K  GGFSS LV  QL YSG+LEV++IR++ YP R PF +FYE F ++
Sbjct:  684 RRQASSISGSTTVASKFKAQLAGLMEMLGSTTPHYIKCIKPNNIKFAGGFSSELVRDQLIYSGILEVIKIRQQGYPIRRPFDQFYETFGII 774          
BLAST of mRNA_D-mesarthrocarpus_Contig9162.2.1 vs. uniprot
Match: A0A1V9Z9P3_9STRA (Myosin-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z9P3_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.260e-22
Identity = 47/80 (58.75%), Postives = 58/80 (72.50%), Query Frame = 1
Query:   43 TVSRAFRGQLLSLMATLRATEPHYIKCIKPNNVKAPGGFSSHLVHQQLNYSGVLEVVRIRREAYPGRVPFLEFYERFELL 282
            TV+  FR QL  LM  L +T PHYIKCIKPNN+K  GGFSS LV  QL Y G+LEV++IR++ YP R PF +FY+ F +L
Sbjct:  689 TVASKFRNQLTGLMEMLGSTTPHYIKCIKPNNIKFAGGFSSQLVRDQLVYGGILEVIKIRQQGYPIRRPFHDFYQTFSML 768          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9162.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3L5_ECTSI1.450e-4587.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CBL8_9STRA4.880e-4081.72P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S4D7C8_HETAK4.160e-3061.63Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W7TRG2_9STRA5.680e-2973.75Myosin-like protein n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A835ZQ73_9STRA7.730e-2969.41P-loop containing nucleoside triphosphate hydrolas... [more]
D7G6I1_ECTSI6.020e-2764.84Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6U0ZTV9_9STRA4.610e-2559.14Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1U3H3_9STRA1.250e-2456.99Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A485LQX5_9STRA1.430e-2353.85Aste57867_22874 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9Z9P3_9STRA1.260e-2258.75Myosin-like protein n=1 Tax=Achlya hypogyna TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9162contigD-mesarthrocarpus_Contig9162:3914..4973 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G3L5
PFAMsAida_C2,Ank_2,Ank_4,IQ,Myosin_head,PH
Model size288
Max annot lvl2759|Eukaryota
KEGG koko:K10352,ko:K10357
KEGG Pathwayko04530,map04530
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.38e-46
EggNOG OGsCOG5022@1|root,KOG0160@2759|Eukaryota
Descriptionmotor activity
Cds size288
COG categoryZ
BRITEko00000,ko00001,ko03019,ko03029,ko04131,ko04147,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791070.4241014-CDS-D-mesarthrocarpus_Contig9162:3913..39731680791070.4241014-CDS-D-mesarthrocarpus_Contig9162:3913..3973Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9162 3914..3973 -
1680791070.441122-CDS-D-mesarthrocarpus_Contig9162:4745..49731680791070.441122-CDS-D-mesarthrocarpus_Contig9162:4745..4973Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9162 4746..4973 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9162.2.1prot_D-mesarthrocarpus_Contig9162.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9162 3914..4973 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9162.2.1

>prot_D-mesarthrocarpus_Contig9162.2.1 ID=prot_D-mesarthrocarpus_Contig9162.2.1|Name=mRNA_D-mesarthrocarpus_Contig9162.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=96bp
SAAKNRVSQIATTVTVSRAFRGQLLSLMATLRATEPHYIKCIKPNNVKAP
GGFSSHLVHQQLNYSGVLEVVRIRREAYPGRVPFLEFYERFELLHK
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mRNA from alignment at D-mesarthrocarpus_Contig9162:3914..4973-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9162.2.1 ID=mRNA_D-mesarthrocarpus_Contig9162.2.1|Name=mRNA_D-mesarthrocarpus_Contig9162.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1060bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9162:3914..4973- (Discosporangium mesarthrocarpum MT17_79)
TCTGCTGCCAAAAACCGTGTCTCCCAGATCGCCACCACCGTCACTGTGTC AAGGGCCTTCCGTGGCCAGCTGCTCAGCCTCATGGCCACACTGCGAGCCA CAGAGCCGCACTACATCAAGTGCATCAAGCCCAACAACGTCAAGGCGCCT GGAGGGTTCAGCTCGCACCTCGTGCACCAGCAGCTCAACTACAGTGGTGT GCTTGAGGTTGTACGCATCAGGAGAGAGGTGAGAGGGTAGAGGGATGTAG GGTTAGGGTCAGGTCTACGGCTTATGGCTGGGGTTGGGGACGGCTGCGGG GGGGGTAAGGATAGGACAGATACTGTTTTCACAAAACACCATCCAGGAAC GGAGAGAGGTTGATAGGAACTTTGCGCTTCCTTGTATGGAGTGTTCTCAC TCCCGCAGTAGCATGGGGTTGCATTAGTGTAGTGCAAAATACTTTCAACA CATGGTCTGTAGTGCACGAGAGGGGGGGGGTGTACCTGGTGATGAAGGGG TTCATGGAATGCAAGCAGCCAAGGAACTAAATTGACCTTCAATTTCTTCA TAGGAATACTTGTGCGTCATGTTTCCACTGTCAGGCTCATGTTTCCACCC TTGGCAAACAAAGAACAGTACCGTACACTCAGCACAATATTGTCATTCTC AGCACTCTTCTTTTCACTGCACTCTTCTCTGAGGCACTTTGTATCTCAGA TTACCTTTTTGTACATAATGACATTGTCCACCTAGGAGGGAGATTTTGTT CATAATACTATGCTTGAAAGTACTTTCTACTTGGTATGTTAATGCAACTA AGACAAGGCACAGCCAGTACAACACAAGCAATCCCTTGAGAGGTGACTCG TCTACGTACTGGAAAATGCATTGTGTTTTCCTCCCTTGTGGAAAAAATCC TCCTACCGTCTCCTAACCCCCCTACCCCCCTCAACACCTGTCTAGTCACA CGCAGTGTTCTTCTCTAAATCCCTGTTTGTGAACACACGGTAAAATGCAG GCATACCCTGGGCGTGTGCCTTTCCTTGAATTCTACGAGCGCTTTGAACT CCTCCACAAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9162:3914..4973-

>mRNA_D-mesarthrocarpus_Contig9162.2.1 ID=mRNA_D-mesarthrocarpus_Contig9162.2.1|Name=mRNA_D-mesarthrocarpus_Contig9162.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=288bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9162:3914..4973- (Discosporangium mesarthrocarpum MT17_79)
TCTGCTGCCAAAAACCGTGTCTCCCAGATCGCCACCACCGTCACTGTGTC
AAGGGCCTTCCGTGGCCAGCTGCTCAGCCTCATGGCCACACTGCGAGCCA
CAGAGCCGCACTACATCAAGTGCATCAAGCCCAACAACGTCAAGGCGCCT
GGAGGGTTCAGCTCGCACCTCGTGCACCAGCAGCTCAACTACAGTGGTGT
GCTTGAGGTTGTACGCATCAGGAGAGAGGCATACCCTGGGCGTGTGCCTT
TCCTTGAATTCTACGAGCGCTTTGAACTCCTCCACAAG
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