mRNA_D-mesarthrocarpus_Contig9160.1.3 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9160.1.3 vs. uniprot
Match: A0A485LHE1_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LHE1_9STRA) HSP 1 Score: 134 bits (338), Expect = 2.770e-34 Identity = 62/117 (52.99%), Postives = 84/117 (71.79%), Query Frame = 3
Query: 438 NILQCLGPSMLPTFNRVGDTLILDRTAPRWGRPISRGDIVVARTPQNANQTVCKRVIATSGQTVRVKSREWYVPDIKRKVPIGHVWLEGDNSSNSTDSRHYGPVPLAMVHGRVMLKV 788
+I+ C+GPSMLPT N GD ++LD+ P W R + G+IV+A++P N QTVCKR+IA+ G+TV +K R + VP GHVWLEGDN +S DSR+YGPVP AM+ GRV+L++
Sbjct: 26 DIVLCVGPSMLPTLNEHGDIVLLDKVTPHW-RKLHNGEIVIAKSPTNHRQTVCKRIIASEGETVALKHRYNSSKIELKTVPKGHVWLEGDNKHDSHDSRYYGPVPYAMIQGRVLLRI 141
BLAST of mRNA_D-mesarthrocarpus_Contig9160.1.3 vs. uniprot
Match: A0A024TL37_9STRA (Signal peptidase I n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TL37_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.760e-33 Identity = 59/117 (50.43%), Postives = 85/117 (72.65%), Query Frame = 3
Query: 438 NILQCLGPSMLPTFNRVGDTLILDRTAPRWGRPISRGDIVVARTPQNANQTVCKRVIATSGQTVRVKSREWYVPDIKRKVPIGHVWLEGDNSSNSTDSRHYGPVPLAMVHGRVMLKV 788
+++ C+GPSMLPT N GD ++LD+ PR+ + + GD+++A++P N QTVCKR+IA+ G+TV +K R ++VP GHVWLEGDN +S DSR+YGPVP AM+ GRV+ +V
Sbjct: 26 DVVLCVGPSMLPTLNEHGDVVLLDKLTPRFSK-LQNGDVIIAKSPTNFRQTVCKRIIASEGETVGLKHRYHPTKIELKQVPKGHVWLEGDNKHDSHDSRYYGPVPYAMIQGRVLCRV 141
BLAST of mRNA_D-mesarthrocarpus_Contig9160.1.3 vs. uniprot
Match: A0A3R6Z2V2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6Z2V2_9STRA) HSP 1 Score: 132 bits (332), Expect = 2.260e-33 Identity = 63/119 (52.94%), Postives = 87/119 (73.11%), Query Frame = 3
Query: 438 NILQCLGPSMLPTFNRVGDTLILDRTAPRWGRPISRGDIVVARTPQNANQTVCKRVIATSGQTVRVKSREWYVPDI--KRKVPIGHVWLEGDNSSNSTDSRHYGPVPLAMVHGRVMLKV 788
+++ C+GPSMLPT N GD ++LD+ +PR+ R + G++V+A +P N QTVCKR+IA+ G+TV +K R Y P +KVP GHVWLEGDN +S DSR+YGPVP AM+ GRV+ +V
Sbjct: 29 DVVLCVGPSMLPTLNEHGDVVLLDKLSPRF-RKVENGEVVIAMSPTNFRQTVCKRIIASEGETVGLKHR--YNPSKIELKKVPKGHVWLEGDNKHDSHDSRYYGPVPYAMIQGRVLFRV 144
BLAST of mRNA_D-mesarthrocarpus_Contig9160.1.3 vs. uniprot
Match: D8LRQ8_ECTSI (Imp1 homolog, Inner Membrane Peptidase complex subunit 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRQ8_ECTSI) HSP 1 Score: 132 bits (333), Expect = 2.800e-33 Identity = 64/114 (56.14%), Postives = 79/114 (69.30%), Query Frame = 3
Query: 444 LQCLGPSMLPTFNRVGDTLILDRTAPRWGRPISRGDIVVARTPQNANQTVCKRVIATSGQTVRVKSREWYVPDIKRKVPIGHVWLEGDNSSNSTDSRHYGPVPLAMVHGRVMLK 785
LQC GPSM+P FN+ GD + + + + GR + RGD+V+A PQN VCKR+I G+TV V+SR W+ D VP GHVWLEGDN SNS+DSR YGP+PLAMV GRV K
Sbjct: 10 LQCSGPSMIPAFNQSGDVIFAEMFSAKTGR-LDRGDVVIAIPPQNPKLRVCKRIIGLPGETVIVRSRSWF-DDRPEFVPEGHVWLEGDNPSNSSDSRTYGPIPLAMVRGRVFFK 121
BLAST of mRNA_D-mesarthrocarpus_Contig9160.1.3 vs. uniprot
Match: M4B8G5_HYAAE (Mitochondrial inner membrane protease subunit n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B8G5_HYAAE) HSP 1 Score: 131 bits (329), Expect = 6.150e-33 Identity = 60/118 (50.85%), Postives = 83/118 (70.34%), Query Frame = 3
Query: 435 SNILQCLGPSMLPTFNRVGDTLILDRTAPRWGRPISRGDIVVARTPQNANQTVCKRVIATSGQTVRVKSREWYVPDIKRKVPIGHVWLEGDNSSNSTDSRHYGPVPLAMVHGRVMLKV 788
++ ++C+GPSMLPT NR GD ++LD+ PR+ R GD+V+A++ N QTVCKR+IA G TV V+ R K+P GHVWLEGDN +S DSR+YGPVP A+V GRV++++
Sbjct: 28 ADTIKCVGPSMLPTLNRDGDIVLLDKITPRFFRQFEPGDVVIAKSVSNPQQTVCKRIIAQEGDTVCVRPRSTSNEVEFHKIPKGHVWLEGDNKRDSHDSRYYGPVPRALVLGRVVMRI 145
BLAST of mRNA_D-mesarthrocarpus_Contig9160.1.3 vs. uniprot
Match: W4G407_9STRA (Mitochondrial inner membrane protease subunit n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G407_9STRA) HSP 1 Score: 130 bits (328), Expect = 9.110e-33 Identity = 62/119 (52.10%), Postives = 87/119 (73.11%), Query Frame = 3
Query: 438 NILQCLGPSMLPTFNRVGDTLILDRTAPRWGRPISRGDIVVARTPQNANQTVCKRVIATSGQTVRVKSREWYVPDI--KRKVPIGHVWLEGDNSSNSTDSRHYGPVPLAMVHGRVMLKV 788
+++ C+GPSMLPT N GD ++LD+ +PR+ R + G++V+A +P N QTVCKR+IA+ G+TV +K R Y P +KVP GHVWLEGDN +S DSR+YGPVP AM+ GRV+ ++
Sbjct: 29 DVVLCVGPSMLPTLNEHGDVVLLDKLSPRF-RKLENGEVVIAMSPTNFRQTVCKRIIASEGETVGLKHR--YNPSKIELKKVPKGHVWLEGDNKHDSHDSRYYGPVPYAMIQGRVLFRL 144
BLAST of mRNA_D-mesarthrocarpus_Contig9160.1.3 vs. uniprot
Match: A0A7S2DNW6_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DNW6_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.040e-32 Identity = 62/121 (51.24%), Postives = 84/121 (69.42%), Query Frame = 3
Query: 429 YPSNILQCLGPSMLPTFNRVGDTLILDRTAPRWGRPISRGDIVVARTPQNANQTVCKRVIATSGQTVRV-KSREWYVPDIKRKVPIGHVWLEGDNSSNSTDSRHYGPVPLAMVHGRVMLKV 788
Y ++ C+GPSM PTFN +GD +I++R PR R RGD+V+A++P +QTVCKR+ G TV + +S + K+P GHVWLEGDNS+NSTDSR+YGPVP A++ GRV LK+
Sbjct: 36 YVVDVTMCIGPSMQPTFNSIGDVVIMERVTPRLQR-FRRGDVVIAKSPTTIDQTVCKRIRGLEGDTVTLSRSGSGGMSGATIKIPKGHVWLEGDNSANSTDSRYYGPVPAALIKGRVALKI 155
BLAST of mRNA_D-mesarthrocarpus_Contig9160.1.3 vs. uniprot
Match: A0A067CCM7_SAPPC (Mitochondrial inner membrane protease subunit n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CCM7_SAPPC) HSP 1 Score: 129 bits (323), Expect = 3.510e-32 Identity = 58/117 (49.57%), Postives = 84/117 (71.79%), Query Frame = 3
Query: 438 NILQCLGPSMLPTFNRVGDTLILDRTAPRWGRPISRGDIVVARTPQNANQTVCKRVIATSGQTVRVKSREWYVPDIKRKVPIGHVWLEGDNSSNSTDSRHYGPVPLAMVHGRVMLKV 788
+++ C+GPSMLPT N GD ++LD+ PR+ R + G++V+A++P N QTVCKR++A+ G+TV +K R + VP GHVWLEGDN +S DSR+YGPVP A++ GRV L++
Sbjct: 26 DVVLCVGPSMLPTLNEHGDIVLLDKITPRFRR-LRNGEVVIAKSPSNFRQTVCKRIVASEGETVGLKHRYNSSRIEMKTVPKGHVWLEGDNKKDSHDSRYYGPVPYALIQGRVALRI 141
BLAST of mRNA_D-mesarthrocarpus_Contig9160.1.3 vs. uniprot
Match: W7TET3_9STRA (Mitochondrial inner membrane protease subunit 1 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TET3_9STRA) HSP 1 Score: 129 bits (325), Expect = 5.980e-32 Identity = 58/120 (48.33%), Postives = 81/120 (67.50%), Query Frame = 3
Query: 429 YPSNILQCLGPSMLPTFNRVGDTLILDRTAPRWGRPISRGDIVVARTPQNANQTVCKRVIATSGQTVRVKSREWYVPDIKRKVPIGHVWLEGDNSSNSTDSRHYGPVPLAMVHGRVMLKV 788
Y +++ GPSMLPTFN GD +++D + GRP+ +GDIV+AR+P N + TVCKRV+ G + ++ + WY + +VP G +WLEGDN NSTDSR YGPVP+A+V G V K+
Sbjct: 49 YVADVTALAGPSMLPTFNEAGDIVVVDCLHVKLGRPLQKGDIVIARSPSNPSNTVCKRVLGLPGDRILIQPQYWYQQEQVLQVPPGMLWLEGDNPFNSTDSRTYGPVPMALVKGLVAFKL 168
BLAST of mRNA_D-mesarthrocarpus_Contig9160.1.3 vs. uniprot
Match: G4ZU17_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZU17_PHYSP) HSP 1 Score: 126 bits (317), Expect = 2.320e-31 Identity = 62/126 (49.21%), Postives = 89/126 (70.63%), Query Frame = 3
Query: 435 SNILQCLGPSMLPTFNRVGDTLILDRTAPRWGRPISRGDIVVARTPQNANQTVCKRVIATSGQTVRVKSREWYVP-DIK-RKVPIGHVWLEGDNSSNSTDSRHYGPVPLAMVHGRVMLKVGARSAD 806
++ ++C+GPSMLPT NR GD ++LD+ PR + + G++V+A + N QTVCKR++A G TV VK R Y P D++ K+P GHVWLEGDN +S DSR+YGPVP +M+ GRV+++V A+
Sbjct: 31 ADTIKCVGPSMLPTLNRDGDIVLLDKLTPRLWK-LQPGEVVIATSVSNPRQTVCKRIVAQEGDTVCVKPR--YSPSDVEFHKIPRGHVWLEGDNKHDSHDSRYYGPVPYSMLQGRVVMRVSCHVAN 153 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9160.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9160.1.3 >prot_D-mesarthrocarpus_Contig9160.1.3 ID=prot_D-mesarthrocarpus_Contig9160.1.3|Name=mRNA_D-mesarthrocarpus_Contig9160.1.3|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=193bp MSFDFQVLYGWYLRCCFFGAVPHLPLLCPFHPKERGPTQAYPSNILQCLGback to top mRNA from alignment at D-mesarthrocarpus_Contig9160:1633..3264- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9160.1.3 ID=mRNA_D-mesarthrocarpus_Contig9160.1.3|Name=mRNA_D-mesarthrocarpus_Contig9160.1.3|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1632bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9160:1633..3264- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9160:1633..3264- >mRNA_D-mesarthrocarpus_Contig9160.1.3 ID=mRNA_D-mesarthrocarpus_Contig9160.1.3|Name=mRNA_D-mesarthrocarpus_Contig9160.1.3|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=579bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9160:1633..3264- (Discosporangium mesarthrocarpum MT17_79)back to top |