mRNA_D-mesarthrocarpus_Contig9136.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9136.2.1 vs. uniprot
Match: D7G589_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G589_ECTSI) HSP 1 Score: 281 bits (720), Expect = 1.160e-81 Identity = 175/362 (48.34%), Postives = 209/362 (57.73%), Query Frame = 3
Query: 3 RITGGMYLLYLRRSLRHISGSWPLLRALLLALCRSQDALASLPGDKQERAAARVQILFTAYISHWKANSIMGEKDQREYEQLTHGLLQHLGASRSPAALPGDRAPQEDPEAGKPHAQDRSGNGGWRYQLMASWCLMHLIHTPVSHHSPHSFPQXXXXXXXXXXXXTLTPALAPKPALEPVPPVAVWNWFGSCLSEG-DGQPLQRLALGALARLLVA--PGSPGGGIGAEVSSVLSAPGFLRALFVALGHNHAQQATEGGGAAGREQWSLGVKEVLADVGRGDRGLLFPRQRFTTRSRLFWARNARLVQSLLLALAPGWGGVTVSTAAATLLQGVASAKPTAAHEDKRSFDCAAAEVGAGLAA 1079
R+TG YLL+ RS+RH+ L R+LLLALC SQ LA LP DKQE+AAARV ILFT Y+S+W++N ++ E D+ EY+ L GLL+ L A A P AG GGWRYQL+ASWCLMHLI V PP+AVW+++ CLS G DGQPLQRLALGAL RLL P PG G +VS +LS+ FL A AL +NH +QATEGG G EQWSLGVKE+L D GRGD LFPR RF RS LFWARNA LV +++ A+ G + LL+ +AK AHEDKRSFDCAAAEV AG+ A
Sbjct: 1213 RLTGACYLLHQNRSMRHVVSKLGLSRSLLLALCDSQSVLARLPTDKQEKAAARVTILFTTYVSYWRSNPLVTEDDRSEYDALLSGLLERLAALNGSA-----------PTAG----------GGWRYQLLASWCLMHLIRPTVQ------------------------------------PPLAVWHYYSECLSTGGDGQPLQRLALGALKRLLAVFDPALPGAG---DVSRLLSSKAFLHAFLPALAYNHQKQATEGGPTGG-EQWSLGVKEILRDAGRGDTRELFPRLRFAARSPLFWARNASLVSAVVSAV----GDEGRAGCIRILLEEATAAKAETAHEDKRSFDCAAAEVAAGVLA 1509
BLAST of mRNA_D-mesarthrocarpus_Contig9136.2.1 vs. uniprot
Match: A0A835YMM2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMM2_9STRA) HSP 1 Score: 116 bits (291), Expect = 9.910e-25 Identity = 115/378 (30.42%), Postives = 153/378 (40.48%), Query Frame = 3
Query: 6 ITGGMYLLYLRRSLRHISGSWPLLRALLLALCRSQDALASLPGDKQERAAARVQILFTAYISHWKANSIMGEKDQREYEQL-THGLLQHLGASRSPAALPGDRAPQEDPEAGKPHAQDRSGNGGWRYQLMASWCLMHLIHTPVSHHSPHSFPQXXXXXXXXXXXXTLTPALAPKPALEPVPPVAVWNWFGSCLSEGDGQPLQRLALGALARLLVAP------------------GSPGGGIGAEVSSVLSAPGFLRALFVALGHNHAQQATEGGGAAGR----EQWSLGVKEVLADVGRGDRGLLFPRQRFTTRSRLFWARNARLVQSLLLALAPGWGGVTVSTAAATLLQGVASAKPTAAHEDKRSFDCAAAEVGAG 1070
ITG +YL++ R +++ I WPLLR LLL LC S AL +LP D E+ AAR+QIL +YIS W+A + D + +L R + +A +H P +A PP+ W WF + L GDGQPLQRL LGALARL+ +V+++L + F LF AL +H + EQWSLGV++VL D RGDR + FPR R S + +RNARLV ALA A L+ G + P ED+R+F CAAAE+ AG
Sbjct: 1609 ITGDIYLMHSRPAMKRIVAKWPLLRDLLLGLCTSAAALRALPPDHHEKFAARIQILLASYISVWRALPVHDAADAAAHAELFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARALA-------LHAPDG-------------------------VMAGGAG----PPLEAWQWFVAGLGCGDGQPLQRLCLGALARLVACQPVVRQQXXXXXXXXXXXXXXXXXXXXEDVAALLCSQRFQSDLFRALALHHRKTXXXXXXXXXXXXXAEQWSLGVQDVLNDAARGDRAV-FPRTRLGCSSNVLRSRNARLVA----ALAAAARAQRFLPPLAALVPGALAEVP---QEDRRAFWCAAAEIFAG 1942
BLAST of mRNA_D-mesarthrocarpus_Contig9136.2.1 vs. uniprot
Match: A0A7S3UZB5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZB5_HETAK) HSP 1 Score: 84.3 bits (207), Expect = 3.830e-15 Identity = 61/212 (28.77%), Postives = 87/212 (41.04%), Query Frame = 3
Query: 9 TGGMYLLYLRRSLRHISGSWPLLRALLLALCRSQDALASLPGDKQERAAARVQILFTAYISHWKANSIMGEKDQREYEQLTHGLLQHLGASRSPAALPGDRAPQEDPEAGKPHAQDRSGNGGWRYQLMASWCLMHLIHTPVSHHSPHSFPQXXXXXXXXXXXXTLTPALAPKPALEPVPPVAVWNWFGSCLSEGDGQPLQRLALGALARLLV 644
TG ++ L +R +RH+SG + + ALC S +A+LP D++ + R+Q LF ++++W+ + E D+ + L GL L A GN WRY+L A+WCL+ L L P AP+P P W L DGQPLQRLAL + RLLV
Sbjct: 89 TGAVHFLSQKRWIRHLSGRPDQVPPFVRALCDSHLMVAALPSDRRPKMTTRLQNLFLKFVANWQLVGLHTEADRAAHAALADGLAASLAA----------------------------GNLHWRYELTATWCLVAL----------------------------LRPDAAPRPGTAP--------WLAEALRRDDGQPLQRLALYGVVRLLV 236
BLAST of mRNA_D-mesarthrocarpus_Contig9136.2.1 vs. uniprot
Match: A0A7S2KQ35_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KQ35_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 8.100e-14 Identity = 96/369 (26.02%), Postives = 156/369 (42.28%), Query Frame = 3
Query: 6 ITGGMYLLYLRRSLRHISGSWPLLRALLLALCRSQDALASLPGDKQERAAARVQILFTAYISHWKANSIMGEKDQREYEQLTHGLLQHLGASRSPAALPGDRAPQ--EDPEAGKPHAQDRSGNGGWRYQLMASWCLMHLIHTPVSHHSPHSFPQXXXXXXXXXXXXTLTPALAPKPALEPVPPVAVWNWFGSCLSEGDGQPLQRLALGALARL----LVAPGSPGGGIGAEVSSVLSAPGFL------RALFVALGHNHAQQATEGGGAAGREQWSLGVKEVLADVGRG-DRGLLFPRQRFTTRSRLFWARNARLVQSLLLALAPGWGGVTVSTAAATLLQGVASAKPTAAHEDKRSFDCAAAEVGAGL 1073
+ G + L+ L + L+H+ + L+ +C +Q L+ LP + + V +F + S + + + DQ +E L+ L AA P +++ + +D +AG+ H WR +L+ASW L+ + T TP L K VW + + E GQP+QR++LG L RL LV P IGA V F +AL AL ++H + + GGG QWS GV+E++ D LFP QR + ++ ++ ++++L+ S LLA+ G A LL + ED+R+ C AAE+ G+
Sbjct: 1107 VKGVLKLVSLPKILKHMMWNETDRFELVKTVCGTQRLLSLLPPEDVAKVVYYVNSIFLLFRSRNFSLLRVSQADQMAHESCLEFLIDMLQDGSKSAAAPDEKSDEVADDSDAGEMH---------WRDRLVASWFLLQFV--------------------DEKDLVTTTPQLMSK----------VWTTCFTLIKEEVGQPIQRVSLGLLGRLVSLALVDMSQPES-IGAGQPDVSLLRDFFTSEQACKALGNALVYDHREDTSVGGGHGA--QWSSGVQEIIRDATANLSTRTLFPFQRVSVKTSIYKLQHSQLLCSALLAI----GYENAKVAVGYLLAQAKDLVASPPSEDQRNQQCTAAEIFGGV 1429
BLAST of mRNA_D-mesarthrocarpus_Contig9136.2.1 vs. uniprot
Match: A0A1Z5JX98_FISSO (Proteasome activator subunit 4 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JX98_FISSO) HSP 1 Score: 72.8 bits (177), Expect = 3.670e-10 Identity = 89/357 (24.93%), Postives = 142/357 (39.78%), Query Frame = 3
Query: 6 ITGGMYLLYLRRSLRHISGSWPLLRALLLALCRSQDALASLPGDKQERAAARVQILFTAYISHWKANSIMGEKDQREYEQLTHGLLQHLGASRSPAALPGDRAPQEDPEAGKPHAQDRSGNGGWRYQLMASWCLMHLIHTPVSHHSPHSFPQXXXXXXXXXXXXTLTPALAPKPALEPVPPVAVWNWFGSCLSEGDGQPLQRLALGALARLLVAPGSPGGGIGAEVSSVLSAPGFLRALFVALGHNHAQQATEGGGAAGREQWSLGVKEVLADVGRGDR-GLLFPRQRFTTRSRLFWARNARLVQSLLLALAPGWGGVTVSTAAATLLQGVASAKPTAAHEDKRSFDCAAAEVGAGL 1073
I G +L L RSL+ + + + L LC + ++ LP ++ ++ +Q++F+ Y S + + D+ Y L+ + + A D E+ H WR L+ W L+ L+ S H T T W+ + QPLQR+ALG L RL+ G +S LS+ GF+RA AL +H + + GG QWS GV+++L D R LFP QR + F +++LV+S+L A+ GV + LLQ +ED+++ +AEV AG+
Sbjct: 1356 IKGVCSILALGRSLKQLLATESMRLQLAQTLCGTDRLVSLLPAEEVQKIVHYLQVVFSPYRSKIYYLPRVTDADKEAY-------LKSMSFANDILAEKKIEGTNGDAESVAVH---------WRKLLLGGWFLLTLVDGDQRSSSIHE-------------QYTRT-----------------WDTCFRIIETETAQPLQRVALGLLGRLVSIAGKSHQADARILSGKLSSEGFMRAFGQALVFDHREDTSVAGGYDA--QWSAGVEDILRDASRNVALKNLFPFQRTSQSMGSFKVSHSQLVESVLAAVKKDIAGVAIKG----LLQAAKEMVEAPPNEDQKNQQVTSAEVFAGI 1660
BLAST of mRNA_D-mesarthrocarpus_Contig9136.2.1 vs. uniprot
Match: A0A7S4N8H7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N8H7_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 1.860e-6 Identity = 95/403 (23.57%), Postives = 151/403 (37.47%), Query Frame = 3
Query: 6 ITGGMYLLYLRRSLRHISGSWPLLRALLLALCRSQDALASLPGDKQERAAARVQILFTAYISHWKANSIMGEKDQREYEQLTHGLLQHLGASRSPAALPGDRA---PQEDP------------------EAGKPHAQDRSGNGGWRYQLMASWCLMHLI-HTPVSHHSPHSFPQXXXXXXXXXXXXTLTPALAPKPALEPVPPVAVWNWFGSCLSEGDGQPLQRLALGALARLLVAP----------GSPGGGIGAEVSSV--------------LSAPGFLRALFVALGHNHAQQATEGGGAAGREQWSLGVKEVLADVGRGDRG-LLFPRQRFTTRSRLFWARNARLVQSLLLALAPGWGGVTVSTAAATLLQGVASAKPTAAHEDKRSFDCAAAEVGAGL 1073
+ G +L L R+++ I + + + + +Q+ + LP ++ ++ Q +F+ + S + + +DQ +E+ LL L AS D PQE+ + K D+S N WR +L W + LI T + PH + VW +S+ GQPLQR+A+G + RL+ G + A S V L F R AL +H + + GGG QWS GV+E+L D LFP QR + S F +A+L+Q+ L+ + G TAA LL + ED+R+ C +AE+ AG+
Sbjct: 796 LKGVCSILALPRTIKEILATESNRLSFVRTILGTQELITLLPSEEMQKMVHYFQAIFSQFRSKFYCLPRILGRDQDLHEECVSFLLSALAASEENVNNESDNGKGTPQEEGTGLAVSSEKSEKEMSVSLQQAKSRPIDKSLN--WRNRLTLGWFVTSLIDETDLVLDDPHISSR-------------------------------VWTTAFDMISKEIGQPLQRVAIGLMGRLVTLSMIGRDFLHLDGQGSDAVLASSSRVAVEKTEGASFLRDRLLDETFCRTFGNALVFDHKEDTSVGGGH--HAQWSAGVEEILRDASANVAPKTLFPFQRTSRSSATFKVSHAQLLQASLIFI----GKADALTAAGYLLDHARELAGSPPSEDQRNQLCTSAEIFAGV 1159
BLAST of mRNA_D-mesarthrocarpus_Contig9136.2.1 vs. uniprot
Match: A0A7S4JQM4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JQM4_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 1.930e-6 Identity = 95/403 (23.57%), Postives = 151/403 (37.47%), Query Frame = 3
Query: 6 ITGGMYLLYLRRSLRHISGSWPLLRALLLALCRSQDALASLPGDKQERAAARVQILFTAYISHWKANSIMGEKDQREYEQLTHGLLQHLGASRSPAALPGDRA---PQEDP------------------EAGKPHAQDRSGNGGWRYQLMASWCLMHLI-HTPVSHHSPHSFPQXXXXXXXXXXXXTLTPALAPKPALEPVPPVAVWNWFGSCLSEGDGQPLQRLALGALARLLVAP----------GSPGGGIGAEVSSV--------------LSAPGFLRALFVALGHNHAQQATEGGGAAGREQWSLGVKEVLADVGRGDRG-LLFPRQRFTTRSRLFWARNARLVQSLLLALAPGWGGVTVSTAAATLLQGVASAKPTAAHEDKRSFDCAAAEVGAGL 1073
+ G +L L R+++ I + + + + +Q+ + LP ++ ++ Q +F+ + S + + +DQ +E+ LL L AS D PQE+ + K D+S N WR +L W + LI T + PH + VW +S+ GQPLQR+A+G + RL+ G + A S V L F R AL +H + + GGG QWS GV+E+L D LFP QR + S F +A+L+Q+ L+ + G TAA LL + ED+R+ C +AE+ AG+
Sbjct: 1428 LKGVCSILALPRTIKEILATESNRLSFVRTILGTQELITLLPSEEMQKMVHYFQAIFSQFRSKFYCLPRILGRDQDLHEECVSFLLSALAASEENVNNESDNGKGTPQEEGTGLAVSSEKSEKEMSVSLQQAKSRPIDKSLN--WRNRLTLGWFVTSLIDETDLVLDDPHISSR-------------------------------VWTTAFDMISKEIGQPLQRVAIGLMGRLVTLSMIGRDFLHLDGQGSDAVLASSSRVAVEKTEGASFLRDRLLDETFCRTFGNALVFDHKEDTSVGGGH--HAQWSAGVEEILRDASANVAPKTLFPFQRTSRSSATFKVSHAQLLQASLIFI----GKADALTAAGYLLDHARELAGSPPSEDQRNQLCTSAEIFAGV 1791 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9136.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9136.2.1 >prot_D-mesarthrocarpus_Contig9136.2.1 ID=prot_D-mesarthrocarpus_Contig9136.2.1|Name=mRNA_D-mesarthrocarpus_Contig9136.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=357bp MYLLYLRRSLRHISGSWPLLRALLLALCRSQDALASLPGDKQERAAARVQback to top mRNA from alignment at D-mesarthrocarpus_Contig9136:950..3856+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9136.2.1 ID=mRNA_D-mesarthrocarpus_Contig9136.2.1|Name=mRNA_D-mesarthrocarpus_Contig9136.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2907bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9136:950..3856+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9136:950..3856+ >mRNA_D-mesarthrocarpus_Contig9136.2.1 ID=mRNA_D-mesarthrocarpus_Contig9136.2.1|Name=mRNA_D-mesarthrocarpus_Contig9136.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1071bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9136:950..3856+ (Discosporangium mesarthrocarpum MT17_79)back to top |