mRNA_D-mesarthrocarpus_Contig9131.4.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9131.4.1
Unique NamemRNA_D-mesarthrocarpus_Contig9131.4.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig9131.4.1 vs. uniprot
Match: A0A2D7FKI5_9PROT (ABC transporter n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7FKI5_9PROT)

HSP 1 Score: 141 bits (356), Expect = 3.140e-40
Identity = 74/84 (88.10%), Postives = 77/84 (91.67%), Query Frame = 1 
Query:    1 MPGIAIKVENLAKHFGDVVAVEDLSFEAREGEIVGLLGGNGAGKTTTISMILGLLIPTSGALEVLGTDMLRHRYRVLSRINFSS 252
            M  IAIKVENL K FGDVVA++ LSF+AREGEIVGLLGGNGAGKTTTISMILGLLIPTSG LEVLGTDMLRHRYRVL RINFSS
Sbjct:    1 MVEIAIKVENLTKKFGDVVAIKSLSFDAREGEIVGLLGGNGAGKTTTISMILGLLIPTSGTLEVLGTDMLRHRYRVLPRINFSS 84
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BLAST of mRNA_D-mesarthrocarpus_Contig9131.4.1 vs. uniprot
Match: A0A520NVZ7_9PROT (ABC transporter ATP-binding protein n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A520NVZ7_9PROT)

HSP 1 Score: 119 bits (297), Expect = 2.440e-31
Identity = 60/84 (71.43%), Postives = 70/84 (83.33%), Query Frame = 1 
Query:    1 MPGIAIKVENLAKHFGDVVAVEDLSFEAREGEIVGLLGGNGAGKTTTISMILGLLIPTSGALEVLGTDMLRHRYRVLSRINFSS 252
            M  +AIKVE L K FG++VAV +LSF+ R GEI  LLGGNGAGKTTTISM+LGLLIP++G +E+LG DMLR RYRVLS INFSS
Sbjct:    1 MADMAIKVEKLVKRFGEIVAVNELSFDVRRGEICALLGGNGAGKTTTISMLLGLLIPSTGKIEILGADMLRDRYRVLSIINFSS 84
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BLAST of mRNA_D-mesarthrocarpus_Contig9131.4.1 vs. uniprot
Match: A0A2D8PUX4_9PROT (ABC transporter n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PUX4_9PROT)

HSP 1 Score: 115 bits (288), Expect = 4.620e-30
Identity = 56/84 (66.67%), Postives = 69/84 (82.14%), Query Frame = 1 
Query:    1 MPGIAIKVENLAKHFGDVVAVEDLSFEAREGEIVGLLGGNGAGKTTTISMILGLLIPTSGALEVLGTDMLRHRYRVLSRINFSS 252
            M   AIKVENL+KHFG++VAV++L+FE  EG +  LLGGNGAGKTTTIS++LGLLIPTSG L++LG DML  RY  L+ +NFSS
Sbjct:    1 MVNAAIKVENLSKHFGNIVAVDNLTFEIEEGSLAALLGGNGAGKTTTISLLLGLLIPTSGQLQILGVDMLHDRYSALADVNFSS 84
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BLAST of mRNA_D-mesarthrocarpus_Contig9131.4.1 vs. uniprot
Match: A0A2E5L4L2_9PROT (ABC transporter n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5L4L2_9PROT)

HSP 1 Score: 115 bits (287), Expect = 7.310e-30
Identity = 57/84 (67.86%), Postives = 69/84 (82.14%), Query Frame = 1 
Query:    1 MPGIAIKVENLAKHFGDVVAVEDLSFEAREGEIVGLLGGNGAGKTTTISMILGLLIPTSGALEVLGTDMLRHRYRVLSRINFSS 252
            M  I IK +NL K FGD+VA++D+SF  R+GE V LLGGNGAGKTTTIS++LGLLIPTSG+L +LG DM R R+RVL R+NFSS
Sbjct:    1 MKKIIIKAKNLTKKFGDIVAIDDISFVVRQGETVALLGGNGAGKTTTISILLGLLIPTSGSLSILGADMSRDRHRVLPRMNFSS 84
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BLAST of mRNA_D-mesarthrocarpus_Contig9131.4.1 vs. uniprot
Match: A0A512DQA6_9PROT (ABC transporter n=4 Tax=Skermanella TaxID=204447 RepID=A0A512DQA6_9PROT)

HSP 1 Score: 113 bits (282), Expect = 4.090e-29
Identity = 57/84 (67.86%), Postives = 66/84 (78.57%), Query Frame = 1 
Query:    1 MPGIAIKVENLAKHFGDVVAVEDLSFEAREGEIVGLLGGNGAGKTTTISMILGLLIPTSGALEVLGTDMLRHRYRVLSRINFSS 252
            M    IKVE L K F D  AV+ +SF    G +VGLLGGNGAGKTTTISM+LGLL+PTSG +EVLG DMLRHR+RVL+R+NFSS
Sbjct:    1 MSQAVIKVEGLTKRFDDTTAVDAISFAVPAGTVVGLLGGNGAGKTTTISMLLGLLLPTSGTIEVLGVDMLRHRHRVLTRMNFSS 84
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BLAST of mRNA_D-mesarthrocarpus_Contig9131.4.1 vs. uniprot
Match: A0A2S6Q9Y0_9PROT (ABC transporter ATP-binding protein NatA n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6Q9Y0_9PROT)

HSP 1 Score: 113 bits (282), Expect = 4.280e-29
Identity = 56/84 (66.67%), Postives = 68/84 (80.95%), Query Frame = 1 
Query:    1 MPGIAIKVENLAKHFGDVVAVEDLSFEAREGEIVGLLGGNGAGKTTTISMILGLLIPTSGALEVLGTDMLRHRYRVLSRINFSS 252
            M    I+V  L K FG+V+AV +LSF+  EG+I  LLGGNGAGKTTTISM+LGLLIPTSG +E+LG D+LRHRY++L RINFSS
Sbjct:    1 MVDAVIRVCRLVKRFGEVLAVNELSFDVMEGKICALLGGNGAGKTTTISMLLGLLIPTSGEIEILGADILRHRYKILPRINFSS 84
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BLAST of mRNA_D-mesarthrocarpus_Contig9131.4.1 vs. uniprot
Match: A0A5J6MR12_9PROT (ABC transporter n=1 Tax=Hypericibacter adhaerens TaxID=2602016 RepID=A0A5J6MR12_9PROT)

HSP 1 Score: 113 bits (282), Expect = 4.680e-29
Identity = 54/80 (67.50%), Postives = 68/80 (85.00%), Query Frame = 1 
Query:   13 AIKVENLAKHFGDVVAVEDLSFEAREGEIVGLLGGNGAGKTTTISMILGLLIPTSGALEVLGTDMLRHRYRVLSRINFSS 252
            AI VE L+K FG V+AV+ L F A +G ++GLLGGNGAGKTT+I+M+LGLLIPTSG++ +LG DML+HRYRVL R+NFSS
Sbjct:    5 AILVEGLSKRFGPVIAVDQLGFSAPKGAVIGLLGGNGAGKTTSIAMLLGLLIPTSGSIRILGEDMLKHRYRVLGRMNFSS 84
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BLAST of mRNA_D-mesarthrocarpus_Contig9131.4.1 vs. uniprot
Match: A0A1F6V161_9PROT (ABC transporter n=1 Tax=Candidatus Muproteobacteria bacterium RBG_16_60_9 TaxID=1817755 RepID=A0A1F6V161_9PROT)

HSP 1 Score: 112 bits (281), Expect = 5.780e-29
Identity = 54/84 (64.29%), Postives = 66/84 (78.57%), Query Frame = 1 
Query:    1 MPGIAIKVENLAKHFGDVVAVEDLSFEAREGEIVGLLGGNGAGKTTTISMILGLLIPTSGALEVLGTDMLRHRYRVLSRINFSS 252
            M  +AI V ++ K F  +VAV+D+SFE R G    LLGGNGAGKTTTI+M+LGLL+PT GA+E+ G DM+RHRYRVL RINFSS
Sbjct:    1 MSELAISVRHIGKRFDSIVAVDDVSFEVRRGATAALLGGNGAGKTTTIAMLLGLLLPTQGAIEIFGIDMIRHRYRVLPRINFSS 84
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BLAST of mRNA_D-mesarthrocarpus_Contig9131.4.1 vs. uniprot
Match: A0A6A7KKM0_9PROT (ATP-binding cassette domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6A7KKM0_9PROT)

HSP 1 Score: 112 bits (280), Expect = 8.520e-29
Identity = 54/79 (68.35%), Postives = 65/79 (82.28%), Query Frame = 1 
Query:   16 IKVENLAKHFGDVVAVEDLSFEAREGEIVGLLGGNGAGKTTTISMILGLLIPTSGALEVLGTDMLRHRYRVLSRINFSS 252
            I+V NL + FGDV AV+++SF    G + GLLG NGAGKTTTI+M+LGLL+PTSGA+ VLG DMLRHRYRVL R+NFSS
Sbjct:    8 IEVRNLCRRFGDVAAVDNVSFSVSAGSVTGLLGANGAGKTTTIAMLLGLLLPTSGAISVLGEDMLRHRYRVLGRMNFSS 86
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig9131.4.1 vs. uniprot
Match: A0A2D8G6S0_9PROT (ABC transporter n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D8G6S0_9PROT)

HSP 1 Score: 112 bits (280), Expect = 8.520e-29
Identity = 56/80 (70.00%), Postives = 68/80 (85.00%), Query Frame = 1 
Query:   13 AIKVENLAKHFGDVVAVEDLSFEAREGEIVGLLGGNGAGKTTTISMILGLLIPTSGALEVLGTDMLRHRYRVLSRINFSS 252
            AIKV +L+KHFG+++AV +LSF   +GE   LLGGNGAGKTTTISM+LGLLIP+SGA+ VLG++ML  RYRVL RINFSS
Sbjct:    5 AIKVHDLSKHFGEIIAVNNLSFXVMQGEXCALLGGNGAGKTTTISMLLGLLIPSSGAINVLGSNMLLDRYRVLPRINFSS 84
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9131.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D7FKI5_9PROT3.140e-4088.10ABC transporter n=1 Tax=Rhodospirillaceae bacteriu... [more]
A0A520NVZ7_9PROT2.440e-3171.43ABC transporter ATP-binding protein n=2 Tax=Rhodos... [more]
A0A2D8PUX4_9PROT4.620e-3066.67ABC transporter n=1 Tax=Rhodospirillaceae bacteriu... [more]
A0A2E5L4L2_9PROT7.310e-3067.86ABC transporter n=1 Tax=Rhodospirillaceae bacteriu... [more]
A0A512DQA6_9PROT4.090e-2967.86ABC transporter n=4 Tax=Skermanella TaxID=204447 R... [more]
A0A2S6Q9Y0_9PROT4.280e-2966.67ABC transporter ATP-binding protein NatA n=1 Tax=A... [more]
A0A5J6MR12_9PROT4.680e-2967.50ABC transporter n=1 Tax=Hypericibacter adhaerens T... [more]
A0A1F6V161_9PROT5.780e-2964.29ABC transporter n=1 Tax=Candidatus Muproteobacteri... [more]
A0A6A7KKM0_9PROT8.520e-2968.35ATP-binding cassette domain-containing protein n=1... [more]
A0A2D8G6S0_9PROT8.520e-2970.00ABC transporter n=1 Tax=Alphaproteobacteria bacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9131contigD-mesarthrocarpus_Contig9131:4876..5127 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog414684.RC1_2540
PFAMsABC_tran
Model size252
Max annot lvl204441|Rhodospirillales
KEGG koko:K01990
KEGG TC3.A.1
KEGG ModuleM00254
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.49e-29
EggNOG OGsCOG1131@1|root,COG1131@2|Bacteria,1MUX3@1224|Proteobacteria,2TSC5@28211|Alphaproteobacteria,2JPQ5@204441|Rhodospirillales
DescriptionATPases associated with a variety of cellular activities
Cds size252
COG categoryV
BRITEko00000,ko00002,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791068.3643305-CDS-D-mesarthrocarpus_Contig9131:4875..51271680791068.3643305-CDS-D-mesarthrocarpus_Contig9131:4875..5127Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9131 4876..5127 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9131.4.1prot_D-mesarthrocarpus_Contig9131.4.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9131 4876..5127 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9131.4.1

>prot_D-mesarthrocarpus_Contig9131.4.1 ID=prot_D-mesarthrocarpus_Contig9131.4.1|Name=mRNA_D-mesarthrocarpus_Contig9131.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=84bp
MPGIAIKVENLAKHFGDVVAVEDLSFEAREGEIVGLLGGNGAGKTTTISM
ILGLLIPTSGALEVLGTDMLRHRYRVLSRINFSS
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mRNA from alignment at D-mesarthrocarpus_Contig9131:4876..5127+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9131.4.1 ID=mRNA_D-mesarthrocarpus_Contig9131.4.1|Name=mRNA_D-mesarthrocarpus_Contig9131.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=252bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9131:4876..5127+ (Discosporangium mesarthrocarpum MT17_79)
ATGCCCGGTATTGCTATCAAAGTGGAAAACCTCGCCAAGCATTTTGGCGA
TGTCGTCGCCGTCGAAGATCTGAGCTTCGAGGCCCGCGAGGGCGAAATCG
TGGGTCTCCTCGGCGGGAATGGCGCCGGCAAAACAACGACGATTTCAATG
ATCCTGGGCCTGTTGATTCCGACATCGGGTGCGCTCGAAGTGCTCGGCAC
GGATATGCTGCGGCATAGATACCGCGTGCTGTCGCGTATCAATTTCTCGT
CC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9131:4876..5127+

>mRNA_D-mesarthrocarpus_Contig9131.4.1 ID=mRNA_D-mesarthrocarpus_Contig9131.4.1|Name=mRNA_D-mesarthrocarpus_Contig9131.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=252bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9131:4876..5127+ (Discosporangium mesarthrocarpum MT17_79)
ATGCCCGGTATTGCTATCAAAGTGGAAAACCTCGCCAAGCATTTTGGCGA
TGTCGTCGCCGTCGAAGATCTGAGCTTCGAGGCCCGCGAGGGCGAAATCG
TGGGTCTCCTCGGCGGGAATGGCGCCGGCAAAACAACGACGATTTCAATG
ATCCTGGGCCTGTTGATTCCGACATCGGGTGCGCTCGAAGTGCTCGGCAC
GGATATGCTGCGGCATAGATACCGCGTGCTGTCGCGTATCAATTTCTCGT
CC
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