mRNA_D-mesarthrocarpus_Contig9101.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9101.3.1
Unique NamemRNA_D-mesarthrocarpus_Contig9101.3.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9101.3.1 vs. uniprot
Match: A0A6H5KQE7_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQE7_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 2.070e-25
Identity = 55/114 (48.25%), Postives = 69/114 (60.53%), Query Frame = 3
Query:  513 WRHAFFLAHRQHPLELMRLAESG------------------SCLVMIHGQVYDLTNFLGNHPGGEAILWEHASTDATVPFERFLHSKTAREVAQGFLIWDGVAAMGAKGTLWSY 800
            WR AFF AHR  P +L+R   S                    C++++HG VY+L  FL +HPGG  IL EHASTDAT  FERF HS+ AR +A+ F++WDG A MG KGTLW +
Sbjct:  237 WREAFFRAHRARPRDLLRELSSSLPSNVNIQQPPSQPAPEQQCIIVLHGNVYELAGFLSSHPGGALILQEHASTDATEAFERFFHSREARRMARRFVVWDGEAVMGRKGTLWRF 350          
BLAST of mRNA_D-mesarthrocarpus_Contig9101.3.1 vs. uniprot
Match: G4YLN8_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YLN8_PHYSP)

HSP 1 Score: 79.7 bits (195), Expect = 1.040e-12
Identity = 64/205 (31.22%), Postives = 90/205 (43.90%), Query Frame = 3
Query:  168 RVPGNGGILHLPRGLLLKEIAAFLSPFDLTRAGMACGALRDVSG--SDLVWKGHLVRRFPNALQADGKGVQDGHCTGKDCFDEEVRLRELEVPGRPRRRHERTSKATVMPAADLVPSWRHAFFLAHRQHPLELMRLAE--SGSCLVMIHGQVYDLTNFLGNHPGGEAILWEHASTDATVPFERFLHSKTAREVAQGFLIWDGVAA 770
            R  GN  + +LPR +L  E+  FLSP DL    M C A     G  ++ +W+    R F    +  G+  Q                                    V P    +  WR  +F  H    +EL RL +   G   V I GQVYD+T+FL  HPGG+ ++ +   TDATV +++F HS+ A+E  Q FL+ D V A
Sbjct:  123 RTAGNS-VTNLPRDVL-HELLLFLSPRDLATCPMVCRAWDHNVGDVAETLWRRVFQRDF---CEPGGRFAQ------------------------------------VFP----IECWRQFYFRHHLSRAVELARLLDITDGRKCVAIEGQVYDVTDFLDLHPGGQHVIGDAIGTDATVIWDQFRHSEEAKESMQQFLVHDQVLA 282          
BLAST of mRNA_D-mesarthrocarpus_Contig9101.3.1 vs. uniprot
Match: R4WCP3_RIPPE (Cytochrome B5 n=1 Tax=Riptortus pedestris TaxID=329032 RepID=R4WCP3_RIPPE)

HSP 1 Score: 72.0 bits (175), Expect = 1.330e-11
Identity = 41/105 (39.05%), Postives = 56/105 (53.33%), Query Frame = 3
Query:  552 LELMRLAESGSCLVMIHGQVYDLTNFLGNHPGGEAILWEHASTDATVPFERFLHSKTAREVAQGFLIWD---GVAAMGAKGTLWSYRDGRGEKESSNPSAIAWAA 857
            LE ++    G  LV+IH  VYD+T FL  HPGGE +L E +  DAT  FE   HS  ARE+ + F I +         +K + W   DG    ++SN S ++W A
Sbjct:    9 LEEVKKKADGKTLVVIHNSVYDVTEFLNEHPGGEEVLMEQSGQDATEAFEDVGHSSDAREMMKKFKIGELHEDDRTTKSKKSPWIPSDGGEHGDTSNSSWMSWLA 113          
BLAST of mRNA_D-mesarthrocarpus_Contig9101.3.1 vs. uniprot
Match: UPI000C203AF4 (cytochrome b5-like n=1 Tax=Onthophagus taurus TaxID=166361 RepID=UPI000C203AF4)

HSP 1 Score: 65.1 bits (157), Expect = 1.740e-9
Identity = 33/69 (47.83%), Postives = 45/69 (65.22%), Query Frame = 3
Query:  549 PLELMRLAES-GSCLVMIHGQVYDLTNFLGNHPGGEAILWEHASTDATVPFERFLHSKTAREVAQGFLI 752
            PLE +   ES G C ++I  +VYD+TNFL  HPGGE +L EHA  DAT  F+  +HS  A ++ + +LI
Sbjct:   22 PLEEVSYHESTGDCWMVICDKVYDVTNFLKQHPGGEDLLMEHAGRDATFAFQGAVHSDLAEQMLKEYLI 90          
BLAST of mRNA_D-mesarthrocarpus_Contig9101.3.1 vs. uniprot
Match: A0A6I9QP38_ELAGV (cytochrome B5 n=1 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A6I9QP38_ELAGV)

HSP 1 Score: 66.2 bits (160), Expect = 2.000e-9
Identity = 41/94 (43.62%), Postives = 55/94 (58.51%), Query Frame = 3
Query:  549 PLELMRLAESGSCLVMIHGQVYDLTNFLGNHPGGE-AILWEHASTDATVPFERFLHSKTAREVAQGFLIWDGVAAMGAKGTLWSYRDGRGEKES 827
            P E+        C ++IHG+VYD+TNFL +HPGGE A+L   A+ DAT  FE   HS TA  + +G+LI  GV   G KG++      R  KE+
Sbjct:    6 PSEISLHTTKKDCWLLIHGKVYDVTNFLEDHPGGEDALLHASANGDATQKFEEVGHSSTAFSMMEGYLI--GVIE-GYKGSVGGGEGARKTKEA 96          
BLAST of mRNA_D-mesarthrocarpus_Contig9101.3.1 vs. uniprot
Match: A0A026W1U1_OOCBI (Cytochrome b5 n=2 Tax=Ooceraea biroi TaxID=2015173 RepID=A0A026W1U1_OOCBI)

HSP 1 Score: 66.2 bits (160), Expect = 2.140e-9
Identity = 38/97 (39.18%), Postives = 53/97 (54.64%), Query Frame = 3
Query:  564 RLAESGSCLVMIHGQVYDLTNFLGNHPGGEAILWEHASTDATVPFERFLHSKTAREVAQGFLIWDGVAAMGAKGTLWSYRDGRGEK-ESSNPSAIAW 851
            R A +    ++IH  VYD+T+FL  HPGGE +L E A  DAT PFE   HS  AR++ + + I + V     K T    +   GE  +SS+ S  +W
Sbjct:   32 RTASTKDVWIIIHDNVYDVTSFLNEHPGGEEVLLEQAGYDATEPFEDIGHSSDARQMMEQYKIGEIVEEERTKNTGKKSKGWSGESADSSSGSWRSW 128          
BLAST of mRNA_D-mesarthrocarpus_Contig9101.3.1 vs. uniprot
Match: UPI001CA8BEAD (cytochrome b5-like isoform X1 n=6 Tax=Polistes TaxID=7456 RepID=UPI001CA8BEAD)

HSP 1 Score: 65.9 bits (159), Expect = 2.380e-9
Identity = 42/132 (31.82%), Postives = 67/132 (50.76%), Query Frame = 3
Query:  555 ELMRLAESGSCLVMIHGQVYDLTNFLGNHPGGEAILWEHASTDATVPFERFLHSKTAREVAQGFLIWDGVAAMGAKGTLWSYRDGRGEKESSNPSAIAWAAEGKE*SIKGFF*LTWTTRSVLRTFLLGFLST 950
            E+ +   + S  ++IH +VYD+TNF+  HPGGE ++ EHA  D T PFE   HS  ARE+ + + I + V     K       + +  ++S+N +    ++ G           +W  +S L   LLG L+T
Sbjct:   19 EVAKYNTAKSAWIIIHDKVYDVTNFVKQHPGGEEVVLEHAGRDGTEPFEDIGHSSDAREMMEPYKIGEIVEEERTK-------NNKKNQDSTNGTTTGDSSSG-----------SW--KSWLIPVLLGLLAT 130          
BLAST of mRNA_D-mesarthrocarpus_Contig9101.3.1 vs. uniprot
Match: A0A023GCB0_AMBTT (Putative cytochrome b5 ixodes scapularis cytochrome b5 n=1 Tax=Amblyomma triste TaxID=251400 RepID=A0A023GCB0_AMBTT)

HSP 1 Score: 65.9 bits (159), Expect = 2.670e-9
Identity = 29/56 (51.79%), Postives = 37/56 (66.07%), Query Frame = 3
Query:  585 CLVMIHGQVYDLTNFLGNHPGGEAILWEHASTDATVPFERFLHSKTAREVAQGFLI 752
            C ++IH +VYD+TNFL  HPGGE ILWEHA  DAT+ F    H+  A  + Q + I
Sbjct:   65 CWIVIHNRVYDVTNFLNKHPGGEEILWEHAGRDATLAFTGTGHTLEAVSLLQQYCI 120          
BLAST of mRNA_D-mesarthrocarpus_Contig9101.3.1 vs. uniprot
Match: R7VGU4_CAPTE (Cytochrome b5 heme-binding domain-containing protein (Fragment) n=1 Tax=Capitella teleta TaxID=283909 RepID=R7VGU4_CAPTE)

HSP 1 Score: 63.9 bits (154), Expect = 3.160e-9
Identity = 28/61 (45.90%), Postives = 38/61 (62.30%), Query Frame = 3
Query:  570 AESGSCLVMIHGQVYDLTNFLGNHPGGEAILWEHASTDATVPFERFLHSKTAREVAQGFLI 752
            +E+ SC ++++  VYD+T FL  HPGGE +L EH   DAT PF+   HS+ A    Q F I
Sbjct:   13 SEADSCWMVVNDNVYDITQFLREHPGGEDVLLEHGGRDATEPFKEVAHSEDASTTLQRFFI 73          
BLAST of mRNA_D-mesarthrocarpus_Contig9101.3.1 vs. uniprot
Match: R4G7X8_RHOPR (Putative cytochrome b5 n=3 Tax=Triatominae TaxID=70999 RepID=R4G7X8_RHOPR)

HSP 1 Score: 65.1 bits (157), Expect = 3.750e-9
Identity = 39/103 (37.86%), Postives = 53/103 (51.46%), Query Frame = 3
Query:  555 ELMRLAESGSCLVMIHGQVYDLTNFLGNHPGGEAILWEHASTDATVPFERFLHSKTAREVAQ----GFLIWDGVAAMGAKGTLWSYRDGRGEKESSNPSAIAW 851
            E+ +  E     V IH  VY++++FL  HPGGE +L E A  DAT  FE   HS  ARE+      G L  +   ++G +G +W   DG     S+N S  AW
Sbjct:   12 EVKKHREIEDVWVAIHNSVYNVSDFLNEHPGGEEVLLEQAGRDATEAFEDVGHSTDAREMMSKYKIGELAEEDRTSVGTRGGIWE--DGTSGSPSANSSWKAW 112          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9101.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KQE7_9PHAE2.070e-2548.25Cytochrome b5 heme-binding domain-containing prote... [more]
G4YLN8_PHYSP1.040e-1231.22Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
R4WCP3_RIPPE1.330e-1139.05Cytochrome B5 n=1 Tax=Riptortus pedestris TaxID=32... [more]
UPI000C203AF41.740e-947.83cytochrome b5-like n=1 Tax=Onthophagus taurus TaxI... [more]
A0A6I9QP38_ELAGV2.000e-943.62cytochrome B5 n=1 Tax=Elaeis guineensis var. tener... [more]
A0A026W1U1_OOCBI2.140e-939.18Cytochrome b5 n=2 Tax=Ooceraea biroi TaxID=2015173... [more]
UPI001CA8BEAD2.380e-931.82cytochrome b5-like isoform X1 n=6 Tax=Polistes Tax... [more]
A0A023GCB0_AMBTT2.670e-951.79Putative cytochrome b5 ixodes scapularis cytochrom... [more]
R7VGU4_CAPTE3.160e-945.90Cytochrome b5 heme-binding domain-containing prote... [more]
R4G7X8_RHOPR3.750e-937.86Putative cytochrome b5 n=3 Tax=Triatominae TaxID=7... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9101contigD-mesarthrocarpus_Contig9101:2269..3615 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog164328.Phyra77617
PFAMsCyt-b5,F-box-like
Model size1347
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.06e-14
EggNOG OGs2DVS5@1|root,2S6NW@2759|Eukaryota,3QAKX@4776|Peronosporales
DescriptionCytochrome b5-like Heme/Steroid binding domain
Cds size606
COG categoryC
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791065.4906409-UTR-D-mesarthrocarpus_Contig9101:2268..27431680791065.4906409-UTR-D-mesarthrocarpus_Contig9101:2268..2743Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9101 2269..2743 -
1680791065.5146394-UTR-D-mesarthrocarpus_Contig9101:3349..36151680791065.5146394-UTR-D-mesarthrocarpus_Contig9101:3349..3615Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9101 3350..3615 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791065.5040689-CDS-D-mesarthrocarpus_Contig9101:2743..33491680791065.5040689-CDS-D-mesarthrocarpus_Contig9101:2743..3349Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9101 2744..3349 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9101.3.1prot_D-mesarthrocarpus_Contig9101.3.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9101 2744..3349 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9101.3.1

>prot_D-mesarthrocarpus_Contig9101.3.1 ID=prot_D-mesarthrocarpus_Contig9101.3.1|Name=mRNA_D-mesarthrocarpus_Contig9101.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=202bp
MACGALRDVSGSDLVWKGHLVRRFPNALQADGKGVQDGHCTGKDCFDEEV
RLRELEVPGRPRRRHERTSKATVMPAADLVPSWRHAFFLAHRQHPLELMR
LAESGSCLVMIHGQVYDLTNFLGNHPGGEAILWEHASTDATVPFERFLHS
KTAREVAQGFLIWDGVAAMGAKGTLWSYRDGRGEKESSNPSAIAWAAEGK
E*
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mRNA from alignment at D-mesarthrocarpus_Contig9101:2269..3615-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9101.3.1 ID=mRNA_D-mesarthrocarpus_Contig9101.3.1|Name=mRNA_D-mesarthrocarpus_Contig9101.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1347bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9101:2269..3615- (Discosporangium mesarthrocarpum MT17_79)
GCCTTGTCCTGACCGCGATTGTTGTTGCAAGGCACACCAACTACCTTTTC GGGCATAAGACTTTTTTCCAAGAAGCGTCAACTTTTGAGCCAGGCAGTGG TGCTGCGGTCTTAGTTCGTGGCCTCTTTTCTCGGAGGCTCCGATTTGACC GTCGCGAAGAAGGGACAAGAGTTCCCGGCAATGGAGGCATCCTTCATCTT CCCAGAGGTCTGCTCTTGAAGGAAATCGCAGCCTTCCTCAGTCCTTTCGA CTTGACCCGTGCAGGGATGGCTTGCGGAGCTCTGCGTGATGTTTCCGGCT CCGATTTGGTGTGGAAGGGACACCTAGTGCGAAGGTTTCCCAACGCACTA CAAGCGGACGGCAAGGGCGTCCAGGACGGACATTGCACTGGGAAGGACTG CTTTGATGAGGAAGTGAGGTTGAGGGAGTTGGAAGTACCAGGACGTCCGC GACGGCGGCACGAGAGGACGTCAAAGGCGACCGTCATGCCTGCCGCGGAT CTTGTTCCCTCTTGGCGCCATGCCTTCTTTCTGGCCCATCGCCAGCACCC GCTAGAGTTGATGCGGCTCGCGGAGTCGGGCTCATGTCTTGTGATGATCC ATGGGCAGGTGTACGACCTCACTAACTTCCTCGGGAATCACCCTGGCGGG GAGGCTATCCTATGGGAGCACGCCTCAACCGACGCTACCGTACCGTTCGA GCGGTTCTTGCACTCCAAAACCGCTCGTGAGGTCGCCCAGGGGTTCTTGA TCTGGGATGGGGTTGCCGCCATGGGAGCTAAGGGTACTTTGTGGTCCTAT CGCGACGGTCGGGGCGAAAAGGAAAGCAGCAACCCATCGGCTATTGCGTG GGCAGCTGAAGGCAAGGAGTGATCGATAAAAGGATTTTTTTAATTGACTT GGACGACAAGATCTGTTTTACGTACGTTCCTGTTAGGATTTTTGTCTACG AAGTGATGCAATTGATTTTACTTGCTTCATACTCGCCCCTTTTAGATGTG CTTGGCATTGTATCTGTGTACAGTTTCAACTCAGGTCTCGGAATATGAAA CCATATTATTTCAAGTCAAGCTCACCGCCAGGGGTGAGCTCACACCAGCA TTGGAGGCTGATTGGTGGATAGATTGTACTATAACCTGGAAGAGGCGCCC CGTCTGGTTCAATGACATGGTTTTTATCACCAATGTAAGAGTACGTTGCT TCGATTTTATTTTTTTCCACTCGCCGAGCATGTCGTGCTTCTTTCACCCC CTTAGTGCATTGTCCGTTCCATTCCATCGGTGTTGGTCCCAAGATGGGCA TGGTGTTCGTACGTAAAACGAACACTTCCTGTTCCTGTGCACTGTTT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9101:2269..3615-

>mRNA_D-mesarthrocarpus_Contig9101.3.1 ID=mRNA_D-mesarthrocarpus_Contig9101.3.1|Name=mRNA_D-mesarthrocarpus_Contig9101.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=606bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9101:2269..3615- (Discosporangium mesarthrocarpum MT17_79)
ATGGCTTGCGGAGCTCTGCGTGATGTTTCCGGCTCCGATTTGGTGTGGAA
GGGACACCTAGTGCGAAGGTTTCCCAACGCACTACAAGCGGACGGCAAGG
GCGTCCAGGACGGACATTGCACTGGGAAGGACTGCTTTGATGAGGAAGTG
AGGTTGAGGGAGTTGGAAGTACCAGGACGTCCGCGACGGCGGCACGAGAG
GACGTCAAAGGCGACCGTCATGCCTGCCGCGGATCTTGTTCCCTCTTGGC
GCCATGCCTTCTTTCTGGCCCATCGCCAGCACCCGCTAGAGTTGATGCGG
CTCGCGGAGTCGGGCTCATGTCTTGTGATGATCCATGGGCAGGTGTACGA
CCTCACTAACTTCCTCGGGAATCACCCTGGCGGGGAGGCTATCCTATGGG
AGCACGCCTCAACCGACGCTACCGTACCGTTCGAGCGGTTCTTGCACTCC
AAAACCGCTCGTGAGGTCGCCCAGGGGTTCTTGATCTGGGATGGGGTTGC
CGCCATGGGAGCTAAGGGTACTTTGTGGTCCTATCGCGACGGTCGGGGCG
AAAAGGAAAGCAGCAACCCATCGGCTATTGCGTGGGCAGCTGAAGGCAAG
GAGTGA
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