mRNA_D-mesarthrocarpus_Contig910.7.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig910.7.1
Unique NamemRNA_D-mesarthrocarpus_Contig910.7.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig910.7.1 vs. uniprot
Match: A0A517QKJ5_9PLAN (Uncharacterized protein n=2 Tax=Thalassoglobus polymorphus TaxID=2527994 RepID=A0A517QKJ5_9PLAN)

HSP 1 Score: 145 bits (367), Expect = 1.440e-39
Identity = 73/129 (56.59%), Postives = 89/129 (68.99%), Query Frame = 1
Query:   10 RRYLEIGCDKDETFGPLEETFDLAVGVDPVRGGTHRISSDDFFAGNNETFDLIFVDGLHSAEQVLRDVENSLAFLEEQGTIVLHDCNPRHEVSQWYPQPPKNNAVHAWNGDVWKAVVNLRTWPGIEVVV 396
            R YLEIGC K++TF  ++      VGVDP+ GGT R +SD+FFA + ETFD+IF+DGLH  EQVLRDVEN LA L  +G ++LHDC P  EV Q     P++ A   W GDVWKAVV LR WP I+V V
Sbjct:  190 RNYLEIGCAKNKTFNQVQAAN--KVGVDPISGGTVRKTSDEFFAQSKETFDVIFIDGLHHWEQVLRDVENGLAALSPKGVMILHDCLPSKEVHQLREPSPQSRA---WTGDVWKAVVELRGWPHIDVAV 313          
BLAST of mRNA_D-mesarthrocarpus_Contig910.7.1 vs. uniprot
Match: A0A202DWI3_9BACT (Uncharacterized protein n=1 Tax=bacterium J17 TaxID=1932695 RepID=A0A202DWI3_9BACT)

HSP 1 Score: 139 bits (351), Expect = 5.270e-39
Identity = 65/131 (49.62%), Postives = 91/131 (69.47%), Query Frame = 1
Query:    1 FWHRRYLEIGCDKDETFGPLEETFDLAVGVDPVRGGTHRISSDDFFAGNNETFDLIFVDGLHSAEQVLRDVENSLAFLEEQGTIVLHDCNPRHEVSQWYPQPPKNNAVHAWNGDVWKAVVNLRTWPGIEVV 393
            F +++YLEIGC +D+ F      +   VGVDPV GGTHR++SD++F+  NE FDLIF+DGLH  +QV+RD+ENSL+ L   GTI++HDCNP+ E+ Q  P+P        WNGDVWKA V+ R    ++++
Sbjct:   19 FGYKKYLEIGCKQDKAFAAANAEY--RVGVDPVSGGTHRMTSDEYFSKFNENFDLIFIDGLHQHQQVIRDIENSLSRLSANGTILMHDCNPQQELHQ-RPEPVPG----VWNGDVWKAYVHYRQRADLDMI 142          
BLAST of mRNA_D-mesarthrocarpus_Contig910.7.1 vs. uniprot
Match: UPI0019BB75A0 (Class I SAM-dependent methyltransferase n=1 Tax=Pelagibacterales bacterium SAG-MED19 TaxID=2760022 RepID=UPI0019BB75A0)

HSP 1 Score: 138 bits (347), Expect = 6.060e-38
Identity = 62/127 (48.82%), Postives = 90/127 (70.87%), Query Frame = 1
Query:    7 HRRYLEIGCDKDETFGPLEETFDLAVGVDPVRGGTHRISSDDFFAGNNETFDLIFVDGLHSAEQVLRDVENSLAFLEEQGTIVLHDCNPRHEVSQWYPQPPKNNAVHAWNGDVWKAVVNLRTWPGIE 387
            ++ YLEIGCDK+++F  ++   +  +GVDPV GGTH++ SDDFF  N E FD+IF+DGLH   QV++D++NSL FL + G I+LHDC PR   + W    P+ N+   WNGDVWK++V++RT   ++
Sbjct:   54 YKTYLEIGCDKNQSFSSIK--IEKRIGVDPVEGGTHKLISDDFFLKNKENFDIIFIDGLHEYHQVMKDIKNSLKFLNKDGVILLHDCLPR---TIWNQITPRINSD--WNGDVWKSIVHVRTLENVD 173          
BLAST of mRNA_D-mesarthrocarpus_Contig910.7.1 vs. uniprot
Match: A0A7C2G6B7_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7C2G6B7_9BACT)

HSP 1 Score: 138 bits (348), Expect = 3.020e-37
Identity = 64/132 (48.48%), Postives = 90/132 (68.18%), Query Frame = 1
Query:    1 FWHRRYLEIGCDKDETFGPLEETFDLAVGVDPVRGGTHRISSDDFFAGNNETFDLIFVDGLHSAEQVLRDVENSLAFLEEQGTIVLHDCNPRHEVSQWYPQPPKNNAVHAWNGDVWKAVVNLRTWPGIEVVV 396
            F +++YLEIGC  D TF  ++  +   +GVDP++GGT R++SD FF   N+ FDLIF+DGLH A+QV+RD+ N+L+ L   GTI+LHDCNP  E     P   + + V  WNGDVWKA+V+ R  P ++ +V
Sbjct:  136 FGYKKYLEIGCKLDATFSNIKIPY--KIGVDPIQGGTLRMTSDRFFEMTNDKFDLIFIDGLHLADQVVRDIHNALSHLNNNGTIILHDCNPVKE-----PHQLRKSMVPTWNGDVWKAIVHYRQDPHLDTIV 260          
BLAST of mRNA_D-mesarthrocarpus_Contig910.7.1 vs. uniprot
Match: D0RRF8_9PROT (Uncharacterized protein n=1 Tax=alpha proteobacterium HIMB114 TaxID=684719 RepID=D0RRF8_9PROT)

HSP 1 Score: 131 bits (329), Expect = 2.920e-35
Identity = 60/127 (47.24%), Postives = 84/127 (66.14%), Query Frame = 1
Query:    7 HRRYLEIGCDKDETFGPLEETFDLAVGVDPVRGGTHRISSDDFFAGNNETFDLIFVDGLHSAEQVLRDVENSLAFLEEQGTIVLHDCNPRHEVSQWYPQPPKNNAVHAWNGDVWKAVVNLRTWPGIE 387
            ++ YLEIGC +DE F  +       +GVDP+ GG  R +SD+FF  NN+ FD IF+DGLH+ EQV++D++NS+  L E G I+LHDC P     Q+ P+     + + WNGDVWKA+V +RTW  +E
Sbjct:   56 YKSYLEIGCHQDEVFSLINIE---KIGVDPMSGGNFRGTSDEFFFQNNKKFDCIFIDGLHTYEQVIKDIKNSIDSLSENGVIILHDCLPSKITHQYVPR-----SRYTWNGDVWKAIVEVRTWEHVE 174          
BLAST of mRNA_D-mesarthrocarpus_Contig910.7.1 vs. uniprot
Match: UPI00199E84C7 (Class I SAM-dependent methyltransferase n=1 Tax=Pelagibacterales bacterium SAG-MED39 TaxID=2760040 RepID=UPI00199E84C7)

HSP 1 Score: 130 bits (328), Expect = 3.350e-35
Identity = 61/127 (48.03%), Postives = 83/127 (65.35%), Query Frame = 1
Query:    7 HRRYLEIGCDKDETFGPLEETFDLAVGVDPVRGGTHRISSDDFFAGNNETFDLIFVDGLHSAEQVLRDVENSLAFLEEQGTIVLHDCNPRHEVSQWYPQPPKNNAVHAWNGDVWKAVVNLRTWPGIE 387
            +++YLEIGC+ DE F  +       VGVDPV GG  R +SDDFF+ N++ FD IF+DGLH  EQV++D+ NS+ FL++ G I++HDC P     Q  P+   N     WNGDVWKA+V +RTW   +
Sbjct:   49 YKKYLEIGCNLDEVFDKININ---KVGVDPVSGGNFRGTSDDFFSKNSDKFDCIFIDGLHIYEQVMKDILNSIKFLDDNGVIIIHDCLPESIGHQRVPRSRYN-----WNGDVWKAIVEVRTWKNFD 167          
BLAST of mRNA_D-mesarthrocarpus_Contig910.7.1 vs. uniprot
Match: A0A2A5V315_9PROT (Uncharacterized protein n=1 Tax=Pelagibacterales bacterium MED-G44 TaxID=1986252 RepID=A0A2A5V315_9PROT)

HSP 1 Score: 130 bits (327), Expect = 6.310e-35
Identity = 62/122 (50.82%), Postives = 84/122 (68.85%), Query Frame = 1
Query:    7 HRRYLEIGCDKDETFGPLEETFDLAVGVDPVRGGTHRISSDDFFAGNNETFDLIFVDGLHSAEQVLRDVENSLAFLEEQGTIVLHDCNPRHEVSQWYPQPPKNNAVHAWNGDVWKAVVNLRT 372
            ++ YLEIGCD++++F  +E      VGVDP  GGTH+++SDDFF  N   FD+IF+DGLH  +QV++D+E+SL  L E G I+LHDC PR   + W    P+ N+   WNGDVWKA+V  RT
Sbjct:   54 YKSYLEIGCDRNQSFSKIE--IKNKVGVDPEEGGTHKMTSDDFFLINKSKFDVIFIDGLHEYQQVVKDIESSLVCLNENGVILLHDCLPR---TIWNQITPRINSD--WNGDVWKAIVKYRT 168          
BLAST of mRNA_D-mesarthrocarpus_Contig910.7.1 vs. uniprot
Match: UPI0019C947F6 (Class I SAM-dependent methyltransferase n=1 Tax=Pelagibacterales bacterium SAG-MED05 TaxID=2760008 RepID=UPI0019C947F6)

HSP 1 Score: 130 bits (326), Expect = 7.240e-35
Identity = 58/123 (47.15%), Postives = 85/123 (69.11%), Query Frame = 1
Query:    7 HRRYLEIGCDKDETFGPLEETFDLAVGVDPVRGGTHRISSDDFFAGNNETFDLIFVDGLHSAEQVLRDVENSLAFLEEQGTIVLHDCNPRHEVSQWYPQPPKNNAVHAWNGDVWKAVVNLRTW 375
            ++ YLEIGCD DE F  +    +  VGVDP++GGT R++SD+FF  N   FD+IF+DGLH+ EQ ++D+ NSL F++++G I++HDC P+   +Q  P+         WNGDVWKA+V+ RT+
Sbjct:   48 YKNYLEIGCDNDENFSKIN--IENKVGVDPLKGGTLRMTSDEFFKNNKRKFDIIFLDGLHTYEQTIKDINNSLKFIKDKGVILIHDCLPKKIWNQVVPR-----IYGHWNGDVWKAIVHSRTY 163          
BLAST of mRNA_D-mesarthrocarpus_Contig910.7.1 vs. uniprot
Match: UPI00198B2FBC (Class I SAM-dependent methyltransferase n=1 Tax=Pelagibacterales bacterium SAG-MED43 TaxID=2760042 RepID=UPI00198B2FBC)

HSP 1 Score: 129 bits (324), Expect = 1.920e-34
Identity = 63/132 (47.73%), Postives = 82/132 (62.12%), Query Frame = 1
Query:    7 HRRYLEIGCDKDETFGPLEETFDLAVGVDPVRGGTHRISSDDFFAGNNETFDLIFVDGLHSAEQVLRDVENSLAFLEEQGTIVLHDCNPRHEVSQWYPQPPKNNAVHAWNGDVWKAVVNLRTWPGIEVVVRY 402
            + +YLEIGC  DE F  +       +GVDPV GGT R++SD FF GN E FD +F+DGLH+ +QV +D++NSL FL E G I+LHDC P +   Q  P+         WNGDVWKA+V  RT   ++V   Y
Sbjct:   62 YSKYLEIGCFDDELFNAIN--IKHKIGVDPVSGGTIRLTSDQFFFGNKEFFDCVFIDGLHTYDQVKKDIKNSLKFLNENGIILLHDCLPNNFYEQATPR-----CQWTWNGDVWKAIVECRTDKNLDVYTCY 186          
BLAST of mRNA_D-mesarthrocarpus_Contig910.7.1 vs. uniprot
Match: A0A3D4KAF9_9PROT (Class I SAM-dependent methyltransferase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3D4KAF9_9PROT)

HSP 1 Score: 128 bits (322), Expect = 5.190e-34
Identity = 64/132 (48.48%), Postives = 83/132 (62.88%), Query Frame = 1
Query:    1 FWHRRYLEIGCDKDETFGPLEETFDLAVGVDPVRGGTHRISSDDFFAGNNETFDLIFVDGLHSAEQVLRDVENSLAFLEEQGTIVLHDCNPRHEVSQWYPQPPKNNAVHAWNGDVWKAVVNLRTWPGIEVVV 396
            F +++YLEIGC +DE F  +  + D  VGVDP  GGT R++SDDFF  NNE FD IF+DGLH  EQV +D+ N+L  L + G I+LHDC P       Y   P  + +  WNGDVWKA V  R+W  ++  V
Sbjct:   69 FGYKKYLEIGCFRDECFSQI--SCDYKVGVDPQSGGTVRLTSDDFFLQNNEKFDFIFIDGLHIYEQVRKDILNALKVLNDGGIIMLHDCLPTRYS---YQTVPPEHLI--WNGDVWKAFVEARSWADVDGAV 193          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig910.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517QKJ5_9PLAN1.440e-3956.59Uncharacterized protein n=2 Tax=Thalassoglobus pol... [more]
A0A202DWI3_9BACT5.270e-3949.62Uncharacterized protein n=1 Tax=bacterium J17 TaxI... [more]
UPI0019BB75A06.060e-3848.82Class I SAM-dependent methyltransferase n=1 Tax=Pe... [more]
A0A7C2G6B7_9BACT3.020e-3748.48Uncharacterized protein n=1 Tax=Phycisphaerales ba... [more]
D0RRF8_9PROT2.920e-3547.24Uncharacterized protein n=1 Tax=alpha proteobacter... [more]
UPI00199E84C73.350e-3548.03Class I SAM-dependent methyltransferase n=1 Tax=Pe... [more]
A0A2A5V315_9PROT6.310e-3550.82Uncharacterized protein n=1 Tax=Pelagibacterales b... [more]
UPI0019C947F67.240e-3547.15Class I SAM-dependent methyltransferase n=1 Tax=Pe... [more]
UPI00198B2FBC1.920e-3447.73Class I SAM-dependent methyltransferase n=1 Tax=Pe... [more]
A0A3D4KAF9_9PROT5.190e-3448.48Class I SAM-dependent methyltransferase n=1 Tax=Al... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig910contigD-mesarthrocarpus_Contig910:18282..19323 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog684719.HIMB114_00000560
PFAMsMethyltransf_24
Model size453
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons3
Evalue4.79e-36
EggNOG OGsCOG4122@1|root,COG4122@2|Bacteria,1RHWY@1224|Proteobacteria,2UN19@28211|Alphaproteobacteria,4BT1A@82117|unclassified Alphaproteobacteria
DescriptionMethyltransferase domain
Cds size453
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791065.3052795-CDS-D-mesarthrocarpus_Contig910:18281..184341680791065.3052795-CDS-D-mesarthrocarpus_Contig910:18281..18434Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig910 18282..18434 +
1680791065.322931-CDS-D-mesarthrocarpus_Contig910:18609..187001680791065.322931-CDS-D-mesarthrocarpus_Contig910:18609..18700Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig910 18610..18700 +
1680791065.338669-CDS-D-mesarthrocarpus_Contig910:19114..193231680791065.338669-CDS-D-mesarthrocarpus_Contig910:19114..19323Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig910 19115..19323 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig910.7.1prot_D-mesarthrocarpus_Contig910.7.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig910 18282..19323 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig910.7.1

>prot_D-mesarthrocarpus_Contig910.7.1 ID=prot_D-mesarthrocarpus_Contig910.7.1|Name=mRNA_D-mesarthrocarpus_Contig910.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=151bp
FWHRRYLEIGCDKDETFGPLEETFDLAVGVDPVRGGTHRISSDDFFAGNN
ETFDLIFVDGLHSAEQVLRDVENSLAFLEEQGTIVLHDCNPRHEVSQWYP
QPPKNNAVHAWNGDVWKAVVNLRTWPGIEVVVRYGSDRLAAAGRFPTLRS
V
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mRNA from alignment at D-mesarthrocarpus_Contig910:18282..19323+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig910.7.1 ID=mRNA_D-mesarthrocarpus_Contig910.7.1|Name=mRNA_D-mesarthrocarpus_Contig910.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1042bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig910:18282..19323+ (Discosporangium mesarthrocarpum MT17_79)
TTCTGGCACAGGCGATACCTAGAGATTGGCTGTGATAAGGATGAAACGTT TGGCCCTTTGGAAGAGACGTTTGACTTGGCTGTTGGAGTGGATCCTGTCA GGGGGGGGACACATCGAATATCCTCTGATGATTTCTTTGCTGGAAACAAT GAGGTGAGCTAGCAAAGTGATGTTTGCAGCGGCTGAAGAGGACACATTGT TGAAAGGCAAGCCCTTTTCCATTATTTCACTTCAAAGCCTAAAACTACTG GATACCAGATTGCGTTCAATTCGTGACTCTCTGAGCAGAGAGGGGATAAT CTGCTCTTTTACCCCCGGCCCATGACAGACGTTTGATCTCATCTTCGTTG ATGGCCTCCATTCAGCAGAGCAAGTTCTTCGTGACGTAGAAAATTCTTTG GCTTTCCTGGAAGAACAAGGTATGTCTCAAGTAACTGGCACTGTTGTTGC CGAGTGTATGTGGCCGTTTGGCGTCTCCCTGCCACGTGTCTCCGGGGGAA CCTTCCTGTGTCCTACATTGGTTGCTCTGTTGAGGTTCGATAAATTTCCC CCACTGAGCTAACAGCACACAACACTGAGGAAGCATCGTGTTCTGTGTGG GCCAATGGACCAGTGGCAGCCCTTCTCGCCCACTGATCCACCGCGCACGG TTGTGCCACTCTGTCTAGGGAAAAAATATCTACACGCAAGTGCCGCCGCT GCAATGTCTCGCAGGCGCTGAGGTCACCCTGCACTGCTGTCACACTGCCC CTACCCCCACTACCACAACTGCATGTTTTGGGCTTGGGCCACCCTGCTGA ATGCTTGGCCTGGCTTCGATATGGCTTCAAAAGGAACAATAGTCCTCCAT GATTGCAACCCGCGGCATGAAGTTTCTCAGTGGTACCCCCAACCTCCTAA GAACAACGCGGTCCATGCATGGAATGGAGATGTGTGGAAAGCTGTGGTCA ACCTGCGGACGTGGCCTGGGATTGAGGTGGTGGTGAGATACGGATCAGAT AGACTGGCTGCTGCGGGGAGGTTTCCCACGCTTCGTAGCGTG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig910:18282..19323+

>mRNA_D-mesarthrocarpus_Contig910.7.1 ID=mRNA_D-mesarthrocarpus_Contig910.7.1|Name=mRNA_D-mesarthrocarpus_Contig910.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=453bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig910:18282..19323+ (Discosporangium mesarthrocarpum MT17_79)
TTCTGGCACAGGCGATACCTAGAGATTGGCTGTGATAAGGATGAAACGTT
TGGCCCTTTGGAAGAGACGTTTGACTTGGCTGTTGGAGTGGATCCTGTCA
GGGGGGGGACACATCGAATATCCTCTGATGATTTCTTTGCTGGAAACAAT
GAGACGTTTGATCTCATCTTCGTTGATGGCCTCCATTCAGCAGAGCAAGT
TCTTCGTGACGTAGAAAATTCTTTGGCTTTCCTGGAAGAACAAGGAACAA
TAGTCCTCCATGATTGCAACCCGCGGCATGAAGTTTCTCAGTGGTACCCC
CAACCTCCTAAGAACAACGCGGTCCATGCATGGAATGGAGATGTGTGGAA
AGCTGTGGTCAACCTGCGGACGTGGCCTGGGATTGAGGTGGTGGTGAGAT
ACGGATCAGATAGACTGGCTGCTGCGGGGAGGTTTCCCACGCTTCGTAGC
GTG
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