mRNA_D-mesarthrocarpus_Contig908.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig908.3.1
Unique NamemRNA_D-mesarthrocarpus_Contig908.3.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig908.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig908contigD-mesarthrocarpus_Contig908:1808..3985 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size1370
Hectar predicted targeting categoryother localisation
Exons2
Cds size1368
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791062.7905884-CDS-D-mesarthrocarpus_Contig908:1807..23341680791062.7905884-CDS-D-mesarthrocarpus_Contig908:1807..2334Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig908 1808..2334 +
1680791062.8017514-CDS-D-mesarthrocarpus_Contig908:3144..39851680791062.8017514-CDS-D-mesarthrocarpus_Contig908:3144..3985Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig908 3145..3985 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig908.3.1prot_D-mesarthrocarpus_Contig908.3.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig908 1808..3985 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig908.3.1

>prot_D-mesarthrocarpus_Contig908.3.1 ID=prot_D-mesarthrocarpus_Contig908.3.1|Name=mRNA_D-mesarthrocarpus_Contig908.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=456bp
MGKEADKVRALSTDSRAAVGDSSGCGGGPGVAALVGVVQPRATTLNPPTI
WPGAGEGQLQETVVGVEIDVQGTGPQPPQLVNSNQGESQRPSGLPLPLGG
GSLQGQLHVSHVSTESTLHGEEGSPQRVLGSMAVGASGSDLESTSDMVSV
ASGAMALNVMSDTDSFTTLGLRPGDRNYSMEFGGFHTPISGSTGDLMATD
HPLHVRKGQTQTITEEHRQRPEHELAGMQHQEGEGAREGLGQLMRHLNNS
SKGQEEHDRLARAVINRSAGDWVESPQQPVLGPPPVPAPGEAVVAVAGRA
ARTAPPDIVPTGDIEKPVTAEPGGEGPPMYSTSNLDSNPLTPVSDDGSGV
RGPIPGSATPPRGEGLIVAQLEARRIAEEQTAAATEIAAGTETLDGPGAG
SRLSGSASDTHKAMQQETLGSPRTFPPPPVLFSPGTAPRGPVLSLSGHLL
FPKDGG
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mRNA from alignment at D-mesarthrocarpus_Contig908:1808..3985+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig908.3.1 ID=mRNA_D-mesarthrocarpus_Contig908.3.1|Name=mRNA_D-mesarthrocarpus_Contig908.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2178bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig908:1808..3985+ (Discosporangium mesarthrocarpum MT17_79)
ATGGGAAAGGAAGCAGACAAGGTCAGAGCCCTGTCCACAGACTCAAGGGC
GGCAGTAGGTGACAGCAGCGGTTGTGGTGGTGGCCCAGGAGTGGCAGCAT
TGGTGGGTGTAGTACAACCCAGAGCCACCACCCTCAATCCCCCCACCATT
TGGCCTGGGGCGGGGGAGGGGCAACTCCAGGAGACGGTTGTTGGCGTGGA
GATAGATGTACAGGGCACTGGTCCTCAGCCTCCACAGTTGGTCAACAGCA
ACCAGGGTGAGAGCCAAAGACCTTCAGGGCTTCCATTGCCTCTGGGAGGC
GGGTCATTGCAAGGGCAGCTGCATGTGTCGCATGTCTCCACCGAGAGCAC
CCTGCATGGGGAGGAGGGGAGCCCACAGAGGGTGTTGGGCTCCATGGCAG
TGGGGGCTTCAGGTTCGGACCTCGAGAGCACTAGCGACATGGTCTCTGTG
GCCAGCGGGGCAATGGCGTTGAATGTGATGTCTGACACCGACTCCTTCAC
TACACTGGGGCTGCGGCCTGGTGACAGGTGTGTAATTGTAAATGTGCTCT
CGTTGGTAGTGGTGGGCCTCTTGCAATTGAAGAGACCAGAGCTCCAGAGC
TCTCCCTATGGCTCTAGAGCTCTGGCTGCTGCCGCTAAGTTGATCTCCAT
GGATAGGTTGAAAAAACCAGCTCCAGGTTATGGAGATTGTGCCAATTATG
GGTGGACTTCACTCAGAATGAAGTGTCAAGGACCAAAGGATTATGGGCCT
GTGCATAGTGCAGAGGATGATTGGTCCCAGAGCTCGGGGTAGATAGGAGT
GGGGTCAGGGTTGTGGGGGACAGGAATCTGGTGGCCCACCAGTCACGGTG
GCACCCAACTGTGGGAAATGGGGGTTAGGGATAGGGTTAGGGTTTTGGGG
GCACAGTATTGTCATGCTTCATGACCCAAGAAGTTGGGACCAAGCGCATC
CCTAACCCTAAACCTAACATTGCCCTACCTAATGAGGCCAATGGGGATCA
AGAAGCCCCAGTCATTTTTCCCCCTGGCAGTCCTCCCCCCTATCAGCTTC
TCCCACCCCCCCGCCGCAAAAGTTCGTGGACTTGCCACTCATCTGCTCAG
TCTCATCGGTCGATTTCTTGGCCGCCAAAGTACTTAATAGTTACTGCTCA
AAGCATTTAATCCTACCTGGGAGTGTGTACTTTTGCTTTGAAGCACTTCT
CTCTTGCCTTGAAAGTATTTACTCTGACCTTGCAGCATTCACCATGCCTT
TAAAGCATGTACTCTAGCTTCAAATGCAGTTACTCCTGCCCCAGATCACT
TGCTCTTACCTTGGTACTTGCCTCTGGATCAATGCAGAAACTACTCAATG
GAGTTTGGGGGGTTCCACACACCAATAAGTGGTTCAACTGGGGATCTCAT
GGCCACAGACCATCCCCTACATGTGAGGAAGGGTCAGACTCAGACCATCA
CGGAGGAGCACAGACAGAGGCCTGAGCACGAGCTTGCAGGCATGCAGCAC
CAGGAAGGAGAGGGGGCGAGGGAGGGGCTGGGGCAGCTCATGAGGCACTT
GAACAACAGCAGCAAAGGCCAGGAGGAGCATGACAGACTAGCCAGGGCGG
TTATCAACAGGTCCGCAGGGGACTGGGTGGAGAGCCCCCAACAACCAGTC
TTGGGTCCTCCCCCTGTCCCTGCCCCTGGGGAGGCAGTGGTTGCTGTGGC
GGGGAGAGCAGCAAGGACTGCACCACCAGACATTGTACCAACTGGGGACA
TTGAAAAGCCGGTGACCGCTGAGCCTGGTGGAGAGGGTCCTCCGATGTAT
TCAACATCAAACCTGGATTCGAACCCCTTAACCCCTGTCAGTGATGATGG
CAGTGGTGTAAGAGGTCCAATCCCGGGCAGTGCTACCCCTCCAAGGGGAG
AAGGGCTGATCGTTGCCCAGCTGGAAGCTCGCAGGATAGCGGAGGAGCAG
ACAGCAGCAGCAACAGAGATTGCAGCGGGGACGGAGACTCTGGATGGCCC
AGGGGCAGGGAGTAGGCTCTCTGGGAGTGCCTCCGACACCCACAAAGCGA
TGCAACAGGAGACCCTGGGGTCTCCACGGACTTTCCCCCCACCCCCAGTG
CTGTTTTCCCCTGGCACAGCGCCAAGGGGGCCAGTGCTTTCCCTTTCGGG
GCACCTGCTATTCCCAAAGGATGGGGGT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig908:1808..3985+

>mRNA_D-mesarthrocarpus_Contig908.3.1 ID=mRNA_D-mesarthrocarpus_Contig908.3.1|Name=mRNA_D-mesarthrocarpus_Contig908.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1368bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig908:1808..3985+ (Discosporangium mesarthrocarpum MT17_79)
ATGGGAAAGGAAGCAGACAAGGTCAGAGCCCTGTCCACAGACTCAAGGGC
GGCAGTAGGTGACAGCAGCGGTTGTGGTGGTGGCCCAGGAGTGGCAGCAT
TGGTGGGTGTAGTACAACCCAGAGCCACCACCCTCAATCCCCCCACCATT
TGGCCTGGGGCGGGGGAGGGGCAACTCCAGGAGACGGTTGTTGGCGTGGA
GATAGATGTACAGGGCACTGGTCCTCAGCCTCCACAGTTGGTCAACAGCA
ACCAGGGTGAGAGCCAAAGACCTTCAGGGCTTCCATTGCCTCTGGGAGGC
GGGTCATTGCAAGGGCAGCTGCATGTGTCGCATGTCTCCACCGAGAGCAC
CCTGCATGGGGAGGAGGGGAGCCCACAGAGGGTGTTGGGCTCCATGGCAG
TGGGGGCTTCAGGTTCGGACCTCGAGAGCACTAGCGACATGGTCTCTGTG
GCCAGCGGGGCAATGGCGTTGAATGTGATGTCTGACACCGACTCCTTCAC
TACACTGGGGCTGCGGCCTGGTGACAGAAACTACTCAATGGAGTTTGGGG
GGTTCCACACACCAATAAGTGGTTCAACTGGGGATCTCATGGCCACAGAC
CATCCCCTACATGTGAGGAAGGGTCAGACTCAGACCATCACGGAGGAGCA
CAGACAGAGGCCTGAGCACGAGCTTGCAGGCATGCAGCACCAGGAAGGAG
AGGGGGCGAGGGAGGGGCTGGGGCAGCTCATGAGGCACTTGAACAACAGC
AGCAAAGGCCAGGAGGAGCATGACAGACTAGCCAGGGCGGTTATCAACAG
GTCCGCAGGGGACTGGGTGGAGAGCCCCCAACAACCAGTCTTGGGTCCTC
CCCCTGTCCCTGCCCCTGGGGAGGCAGTGGTTGCTGTGGCGGGGAGAGCA
GCAAGGACTGCACCACCAGACATTGTACCAACTGGGGACATTGAAAAGCC
GGTGACCGCTGAGCCTGGTGGAGAGGGTCCTCCGATGTATTCAACATCAA
ACCTGGATTCGAACCCCTTAACCCCTGTCAGTGATGATGGCAGTGGTGTA
AGAGGTCCAATCCCGGGCAGTGCTACCCCTCCAAGGGGAGAAGGGCTGAT
CGTTGCCCAGCTGGAAGCTCGCAGGATAGCGGAGGAGCAGACAGCAGCAG
CAACAGAGATTGCAGCGGGGACGGAGACTCTGGATGGCCCAGGGGCAGGG
AGTAGGCTCTCTGGGAGTGCCTCCGACACCCACAAAGCGATGCAACAGGA
GACCCTGGGGTCTCCACGGACTTTCCCCCCACCCCCAGTGCTGTTTTCCC
CTGGCACAGCGCCAAGGGGGCCAGTGCTTTCCCTTTCGGGGCACCTGCTA
TTCCCAAAGGATGGGGGT
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