mRNA_D-mesarthrocarpus_Contig9053.5.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig9053.5.1
Unique NamemRNA_D-mesarthrocarpus_Contig9053.5.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9053.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig9053contigD-mesarthrocarpus_Contig9053:2274..3387 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size1114
Hectar predicted targeting categorysignal anchor
Exons1
Cds size726
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791060.3285515-UTR-D-mesarthrocarpus_Contig9053:2273..26611680791060.3285515-UTR-D-mesarthrocarpus_Contig9053:2273..2661Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig9053 2274..2661 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791060.3398263-CDS-D-mesarthrocarpus_Contig9053:2661..33871680791060.3398263-CDS-D-mesarthrocarpus_Contig9053:2661..3387Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig9053 2662..3387 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig9053.5.1prot_D-mesarthrocarpus_Contig9053.5.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig9053 2662..3387 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig9053.5.1

>prot_D-mesarthrocarpus_Contig9053.5.1 ID=prot_D-mesarthrocarpus_Contig9053.5.1|Name=mRNA_D-mesarthrocarpus_Contig9053.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=242bp
MHDAIAEGHPERPRESAPLDRACRLWHRRMSTTRQRRSPIRVFVLLGSGA
CLLPAVSGFCVGPSNVLKARPVDGVPSSLNTGFVCAFFTSPELSRRQLEC
LNLSMTEGFPSDDPSFRCRSSAPRRPVLRHLQSRGLSTVLRARRRSLVQP
HSEVRHVINKLPSLFRKCKKAVARKLNPPQESSRAAAAAAAGLASAVAVV
ACRPRWTTAVAAATAKGAGSAAGTTLAMVGNSPGSMAGAGAG
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mRNA from alignment at D-mesarthrocarpus_Contig9053:2274..3387+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig9053.5.1 ID=mRNA_D-mesarthrocarpus_Contig9053.5.1|Name=mRNA_D-mesarthrocarpus_Contig9053.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1114bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9053:2274..3387+ (Discosporangium mesarthrocarpum MT17_79)
TTGGGATTCCTCCTCGTTGTGGACAGAGAAGGTGGGTCAGGGCACCCTGA
GGTTTGGGCCCCTGTTGGCAGTGCACCGATTCGATCTCATGTTGGCAAAC
ACTCCTTGTTTGACAAAGGGCTCCTTTGCAGCTAAGATAGTGCCCCTCGA
TCAAACATAGGAAGAAGTGGTGGGAGGAACGGGGATGCTTGAGGGAGGAC
CTTATGTCACGATTTGGGAAGAGGATTTGAACTTCCAGCTCGTGACTCCT
GGGGAGTTGGTCAGTGCGCCCGACGACATCTCTGGCCTAGAGACAACTAG
ACACCTCACGAAATCGAAACTTCCAATCCCATCAACTCTGCTCTCGTAGA
GCTATTTTTACAGCTCAGGGGCTGGAGCTGGAGGTTGAATGCATGATGCG
ATAGCTGAGGGACATCCGGAACGCCCGAGGGAGTCGGCTCCCTTGGACCG
AGCCTGCCGGTTGTGGCACAGGAGGATGTCGACCACAAGACAGCGGCGAT
CGCCAATTCGAGTGTTTGTTCTTCTGGGGTCGGGAGCCTGTCTCCTGCCT
GCCGTTTCCGGTTTCTGCGTGGGGCCCTCGAATGTCTTGAAAGCGCGTCC
TGTCGATGGAGTCCCGTCGTCCCTAAACACCGGTTTTGTCTGCGCCTTCT
TTACCTCACCGGAGCTCTCACGGCGTCAACTGGAGTGCCTTAACCTGTCA
ATGACGGAAGGATTCCCGTCAGATGATCCAAGCTTTCGCTGCCGGAGTTC
CGCACCCCGGCGGCCCGTGCTACGGCACCTACAAAGTCGTGGCCTCTCGA
CTGTCCTGCGGGCTCGCCGCCGTAGCCTCGTCCAACCTCATTCAGAGGTA
AGGCACGTCATCAACAAACTCCCTTCCCTTTTCCGGAAGTGCAAGAAAGC
TGTTGCTCGCAAGTTAAACCCACCTCAGGAAAGCAGCCGTGCAGCTGCCG
CTGCTGCGGCAGGACTAGCTTCTGCCGTTGCCGTGGTCGCATGCCGGCCC
AGGTGGACCACTGCGGTGGCAGCAGCAACGGCGAAGGGGGCGGGGTCAGC
TGCGGGGACCACCTTGGCCATGGTTGGGAATAGTCCCGGATCTATGGCCG
GGGCAGGGGCAGGG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9053:2274..3387+

>mRNA_D-mesarthrocarpus_Contig9053.5.1 ID=mRNA_D-mesarthrocarpus_Contig9053.5.1|Name=mRNA_D-mesarthrocarpus_Contig9053.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=726bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9053:2274..3387+ (Discosporangium mesarthrocarpum MT17_79)
ATGCATGATGCGATAGCTGAGGGACATCCGGAACGCCCGAGGGAGTCGGC
TCCCTTGGACCGAGCCTGCCGGTTGTGGCACAGGAGGATGTCGACCACAA
GACAGCGGCGATCGCCAATTCGAGTGTTTGTTCTTCTGGGGTCGGGAGCC
TGTCTCCTGCCTGCCGTTTCCGGTTTCTGCGTGGGGCCCTCGAATGTCTT
GAAAGCGCGTCCTGTCGATGGAGTCCCGTCGTCCCTAAACACCGGTTTTG
TCTGCGCCTTCTTTACCTCACCGGAGCTCTCACGGCGTCAACTGGAGTGC
CTTAACCTGTCAATGACGGAAGGATTCCCGTCAGATGATCCAAGCTTTCG
CTGCCGGAGTTCCGCACCCCGGCGGCCCGTGCTACGGCACCTACAAAGTC
GTGGCCTCTCGACTGTCCTGCGGGCTCGCCGCCGTAGCCTCGTCCAACCT
CATTCAGAGGTAAGGCACGTCATCAACAAACTCCCTTCCCTTTTCCGGAA
GTGCAAGAAAGCTGTTGCTCGCAAGTTAAACCCACCTCAGGAAAGCAGCC
GTGCAGCTGCCGCTGCTGCGGCAGGACTAGCTTCTGCCGTTGCCGTGGTC
GCATGCCGGCCCAGGTGGACCACTGCGGTGGCAGCAGCAACGGCGAAGGG
GGCGGGGTCAGCTGCGGGGACCACCTTGGCCATGGTTGGGAATAGTCCCG
GATCTATGGCCGGGGCAGGGGCAGGG
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