mRNA_D-mesarthrocarpus_Contig90.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig90.3.1 vs. uniprot
Match: D7FHS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHS1_ECTSI) HSP 1 Score: 301 bits (772), Expect = 1.320e-99 Identity = 160/197 (81.22%), Postives = 179/197 (90.86%), Query Frame = 3
Query: 216 EDPVIVKRLTNQVAASTITTRNGAIQREMQEAYRKLIVANVERKLTLQDVASFSTFLVGVRSRLQEKGSSLRRKHTVLSSLLKHAPRARVQRIYSDLSAVEEQESALSKDVDLFNKLQQDLKDSPAYKAMMDYGKSSGMVNIDGTMMPDPAKHPELEAMASMSVKDMLAEFKMEDRRNQQASLASHLSSSVKAATGL 806
+DPV+VK LT+QV +S+ITTRNGAIQREMQ+AYRKLI ANVERKLTLQDVASFSTFLVGVR RL EKGS+LRR+H+VLSSLLKHAPRARVQRIYSDL+AVEEQESAL+KDVDLFNKLQQDLK+SPAYKAMM+YG+SSGMVN+DGTMMPDP KHPELEAMASMSVKDMLAEFKMED+RN++ + SV GL
Sbjct: 10 DDPVVVKSLTSQVESSSITTRNGAIQREMQDAYRKLICANVERKLTLQDVASFSTFLVGVRVRLHEKGSNLRRRHSVLSSLLKHAPRARVQRIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMMEYGQSSGMVNVDGTMMPDPTKHPELEAMASMSVKDMLAEFKMEDKRNEEQGGGGRGAGSVGGDNGL 206
BLAST of mRNA_D-mesarthrocarpus_Contig90.3.1 vs. uniprot
Match: A0A6H5JIY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIY2_9PHAE) HSP 1 Score: 159 bits (401), Expect = 6.250e-45 Identity = 79/89 (88.76%), Postives = 88/89 (98.88%), Query Frame = 3
Query: 489 RIYSDLSAVEEQESALSKDVDLFNKLQQDLKDSPAYKAMMDYGKSSGMVNIDGTMMPDPAKHPELEAMASMSVKDMLAEFKMEDRRNQQ 755
RIYSDL+AVEEQESAL+KDVDLFNKLQQDLK+SPAYKAMM+YG+SSGMVN+DGTMMPDP KHPELEAMASMSVKDMLAEFKMED+RN++
Sbjct: 3 RIYSDLAAVEEQESALTKDVDLFNKLQQDLKESPAYKAMMEYGQSSGMVNVDGTMMPDPTKHPELEAMASMSVKDMLAEFKMEDKRNEK 91
BLAST of mRNA_D-mesarthrocarpus_Contig90.3.1 vs. uniprot
Match: A0A176VK39_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha subsp. ruderalis TaxID=1480154 RepID=A0A176VK39_MARPO) HSP 1 Score: 82.0 bits (201), Expect = 1.120e-13 Identity = 42/118 (35.59%), Postives = 76/118 (64.41%), Query Frame = 3
Query: 270 TTRNGAIQREMQEAYRKLIVANVERKLTLQDVASFSTFLVGVRSRLQEKGSSLRRKHTVLSSLLKHAPRARVQRIYSDLSAVEEQESALSKDVDLFNKLQQDLKDSPAYKAMMDYGKS 623
T+ +QR+++E Y +L+ +NV + LTL V F+T LV +S LQ+K +++R+ T+ SLL A ++ R+ + +E ++ L +D ++N+LQ+ LK SPAY+ M++YG++
Sbjct: 427 TSSGSMVQRKIKEQYDELVRSNVAKSLTLAQVGRFTTCLVEAKSSLQQKSDTIQRRFTIAKSLLSKADKSSFDRLCGQIYGLEIEQKKLEEDTVVYNRLQEQLKLSPAYQKMLEYGRT 544
BLAST of mRNA_D-mesarthrocarpus_Contig90.3.1 vs. uniprot
Match: A0A2R6XWC9_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XWC9_MARPO) HSP 1 Score: 82.0 bits (201), Expect = 1.150e-13 Identity = 42/118 (35.59%), Postives = 76/118 (64.41%), Query Frame = 3
Query: 270 TTRNGAIQREMQEAYRKLIVANVERKLTLQDVASFSTFLVGVRSRLQEKGSSLRRKHTVLSSLLKHAPRARVQRIYSDLSAVEEQESALSKDVDLFNKLQQDLKDSPAYKAMMDYGKS 623
T+ +QR+++E Y +L+ +NV + LTL V F+T LV +S LQ+K +++R+ T+ SLL A ++ R+ + +E ++ L +D ++N+LQ+ LK SPAY+ M++YG++
Sbjct: 707 TSSGSMVQRKIKEQYDELVRSNVAKSLTLAQVGRFTTCLVEAKSSLQQKSDTIQRRFTIAKSLLSKADKSSFDRLCGQIYGLEIEQKKLEEDTVVYNRLQEQLKLSPAYQKMLEYGRT 824
BLAST of mRNA_D-mesarthrocarpus_Contig90.3.1 vs. uniprot
Match: A0A7I4E987_PHYPA (Uncharacterized protein n=7 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4E987_PHYPA) HSP 1 Score: 79.0 bits (193), Expect = 1.170e-12 Identity = 41/118 (34.75%), Postives = 73/118 (61.86%), Query Frame = 3
Query: 270 TTRNGAIQREMQEAYRKLIVANVERKLTLQDVASFSTFLVGVRSRLQEKGSSLRRKHTVLSSLLKHAPRARVQRIYSDLSAVEEQESALSKDVDLFNKLQQDLKDSPAYKAMMDYGKS 623
T +QR+++E Y +L+ +N + LTL V F+T LV +S LQ+K +++R+ T+ SLL A ++ R+ + +E ++ L +D ++N+LQ+ LK SPAY M++YG++
Sbjct: 584 TYSGSMVQRKIKEQYDELVRSNAAKTLTLAQVGRFTTCLVETKSALQQKSDTIQRRFTIAKSLLSKADKSSFDRLCGQIYGLENEQKKLEEDTVVYNRLQEQLKLSPAYLKMLEYGRA 701
BLAST of mRNA_D-mesarthrocarpus_Contig90.3.1 vs. uniprot
Match: A0A835DJU0_9MAGN (Uncharacterized protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A835DJU0_9MAGN) HSP 1 Score: 73.6 bits (179), Expect = 4.050e-11 Identity = 40/114 (35.09%), Postives = 69/114 (60.53%), Query Frame = 3
Query: 270 TTRNGAIQREMQEAYRKLIVANVERKLTLQDVASFSTFLVGVRSRLQEKGSSLRRKHTVLSSLLKHAPRARVQRIYSDLSAVEEQESALSKDVDLFNKLQQDLKDSPAYKAMMD 611
T+ + A QR++++ Y +L ++ LTL V F+ L+ ++ LQ K ++RK T+ +LL A R+ R+Y +S +E ++ L +D ++N+LQQ LK SPAYK M++
Sbjct: 201 TSSSSATQRKIKQQYDQLKKSHESNGLTLAQVGQFANCLIEAKNELQHKSEIIQRKFTITKALLIKANRSSFDRLYQQISKLESEQKRLEEDASVYNRLQQQLKLSPAYKKMLE 314
BLAST of mRNA_D-mesarthrocarpus_Contig90.3.1 vs. uniprot
Match: A0A3S3NYD6_9MAGN (Uncharacterized protein n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3NYD6_9MAGN) HSP 1 Score: 73.6 bits (179), Expect = 4.120e-11 Identity = 39/114 (34.21%), Postives = 69/114 (60.53%), Query Frame = 3
Query: 270 TTRNGAIQREMQEAYRKLIVANVERKLTLQDVASFSTFLVGVRSRLQEKGSSLRRKHTVLSSLLKHAPRARVQRIYSDLSAVEEQESALSKDVDLFNKLQQDLKDSPAYKAMMD 611
T+ A QR++++ Y +L+ +N + LT+ V F+ L+ R+ LQ K ++RK T+ +LL A R+ R+Y + +E ++ L +D ++N+LQ+ LK SPAYK M++
Sbjct: 204 TSAASATQRKIKQHYDQLVKSNDAKALTMAQVGQFANCLIEARNELQHKSEIIQRKFTITKALLFKADRSSFDRLYQQIYKLEAEQKRLEEDASVYNRLQEQLKLSPAYKQMLE 317
BLAST of mRNA_D-mesarthrocarpus_Contig90.3.1 vs. uniprot
Match: A0A1D1Z5Y6_9ARAE (Chaperone protein DnaK (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1Z5Y6_9ARAE) HSP 1 Score: 70.9 bits (172), Expect = 5.420e-11 Identity = 38/113 (33.63%), Postives = 67/113 (59.29%), Query Frame = 3
Query: 279 NGAIQREMQEAYRKLIVANVERKLTLQDVASFSTFLVGVRSRLQEKGSSLRRKHTVLSSLLKHAPRARVQRIYSDLSAVEEQESALSKDVDLFNKLQQDLKDSPAYKAMMDYG 617
+ A QR +++ Y +L+ +N + LT+ V F+ L+ R+ LQ K ++RK T+ +LL A R+ R+ + +E ++ L +D ++N+LQ+ LK SPAYK M++ G
Sbjct: 35 SSATQRRIKQQYDQLVKSNQAKALTMAQVGEFANCLIEARNELQHKSEVIQRKFTITKALLFKADRSSFDRLCQQIYKLEAEQKRLEEDAVVYNRLQEQLKLSPAYKTMLEIG 147
BLAST of mRNA_D-mesarthrocarpus_Contig90.3.1 vs. uniprot
Match: A0A1U7YW96_NELNU (uncharacterized protein LOC104586621 n=2 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U7YW96_NELNU) HSP 1 Score: 71.6 bits (174), Expect = 1.850e-10 Identity = 39/117 (33.33%), Postives = 70/117 (59.83%), Query Frame = 3
Query: 270 TTRNGAIQREMQEAYRKLIVANVERKLTLQDVASFSTFLVGVRSRLQEKGSSLRRKHTVLSSLLKHAPRARVQRIYSDLSAVEEQESALSKDVDLFNKLQQDLKDSPAYKAMMDYGK 620
T+ + QR++++ Y +L+ +N + LTL V F+ L+ R+ L+ K ++RK T+ +LL A R+ R+ + +E ++ L +D ++N+LQQ LK SPAYK M++ G+
Sbjct: 203 TSSSSVTQRKIKQQYDQLVKSNDSKALTLAQVCQFANCLIEARNELKHKSEIIQRKFTITKALLFKADRSSFDRLCQQMYKLEAEQKRLEEDALVYNRLQQQLKLSPAYKKMLEIGE 319
BLAST of mRNA_D-mesarthrocarpus_Contig90.3.1 vs. uniprot
Match: B8LR74_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=B8LR74_PICSI) HSP 1 Score: 71.2 bits (173), Expect = 3.020e-10 Identity = 43/156 (27.56%), Postives = 88/156 (56.41%), Query Frame = 3
Query: 264 TITTRNGAIQREMQEAYRKLIVANVERKLTLQDVASFSTFLVGVRSRLQEKGSSLRRKHTVLSSLLKHAPRARVQRIYSDLSAVEEQESALSKDVDLFNKLQQDLKDSPAYKAMMDYGKSSGMVNIDGTMMPDPAKHPELEAMASMSVKDMLAEFK 731
T + R +QR +++ Y +L+ +N LTL V F+ LV ++ L +K +++RK T+ SLL A ++ R+ + +E ++ L +D ++N+LQ+ LK SP+Y+ M++YG +++ + + ++ + E +S +++LA+ K
Sbjct: 255 TSSGRGSVMQRRIKQHYDELMHSNTAGPLTLAQVGRFTNCLVEAKAALLQKSETIQRKFTIAKSLLVKADKSSFDRLCGQIYRLETEQKRLEEDTKVYNRLQEQLKISPSYQKMLEYGHGHFQSHLNTGQLLEKSEAEDAE----ISFEELLAQEK 406 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig90.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig90.3.1 >prot_D-mesarthrocarpus_Contig90.3.1 ID=prot_D-mesarthrocarpus_Contig90.3.1|Name=mRNA_D-mesarthrocarpus_Contig90.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=254bp MSAYAGDGVGSKASFTSEQARRLEDPVIVKRLTNQVAASTITTRNGAIQRback to top mRNA from alignment at D-mesarthrocarpus_Contig90:6588..10754- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig90.3.1 ID=mRNA_D-mesarthrocarpus_Contig90.3.1|Name=mRNA_D-mesarthrocarpus_Contig90.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=4167bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig90:6588..10754- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig90:6588..10754- >mRNA_D-mesarthrocarpus_Contig90.3.1 ID=mRNA_D-mesarthrocarpus_Contig90.3.1|Name=mRNA_D-mesarthrocarpus_Contig90.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=762bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig90:6588..10754- (Discosporangium mesarthrocarpum MT17_79)back to top |