mRNA_D-mesarthrocarpus_Contig90.17.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig90.17.1 vs. uniprot
Match: A0A6A5ATA6_9STRA (HTH_Tnp_Tc3_2 domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ATA6_9STRA) HSP 1 Score: 160 bits (405), Expect = 4.160e-42 Identity = 99/260 (38.08%), Postives = 144/260 (55.38%), Query Frame = 1
Query: 1 GVSRTTVFRHSKADDLQKADGQPMDMSRGRQGRCGR--PNTVTDLW----EVPSMSRTSYRKRVVKLGVPLSSLWRLC--KRGARKHKRWVKPVLSDKQKRDRVGFALSNMHSKGGSGVVVDDMYNWVHVDEKWFYVINNGRGIYLHPGEDAPQKPRAQNKRFITKVIFLAAVTRSRM--ISYEMWFDGKIGI*PTADTVAAMRSSKNRKKGTMMLKPATVNTERYMEPMIDKTIPAIKPRMPRPPGHTIFVQQDGEKPH 750
GVSR TV + + KA D++ ++GRCGR T++D+ VP + R ++ V G+P ++LWR+ K+ R+ R +KP++++K K DR+ FA S +H +G+V DMY+ VH+DEKWFY+ R YL E P + + +KR I KV+FL AV R R MW DGK+G+ P A R SKNR +G ++ P V Y + ++D IPAIK P P H I++QQD +PH
Sbjct: 44 GVSRQTVSKIWRRGQRSKARNGLADVALKKKGRCGRRPSRTMSDIETAIKSVPPVLRRTFESLAVSSGIPRTTLWRVLQTKKLQRRTSR-LKPMVTEKHKADRLAFARSFVHGTSCNGMVWHDMYDRVHIDEKWFYLTEVNRRYYLWHDESTPVR-KCNSKRHIIKVMFLTAVARPRFDYARKTMW-DGKVGMWPFVAVRPAQRKSKNRARGALITTPIVVTKPFYRQYLLDHVIPAIKQAWPGPRAHPIYIQQDNARPH 300
BLAST of mRNA_D-mesarthrocarpus_Contig90.17.1 vs. uniprot
Match: A0A6A4YXI9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YXI9_9STRA) HSP 1 Score: 155 bits (393), Expect = 1.840e-39 Identity = 97/257 (37.74%), Postives = 139/257 (54.09%), Query Frame = 1
Query: 4 VSRTTVFRHSKAD--DLQKADGQPMDMSRGRQGRCGR----PNTVTDLWEVPSMSRTSYRKRVVKLGVPLSSLWRLCKRGAR-KHKRWVKPVLSDKQKRDRVGFALSNMHSKGGSGVVVDDMYNWVHVDEKWFYVINNGRGIYLHPGEDAPQKPRAQNKRFITKVIFLAAVTRSRMISYE-MWFDGKIGI*PTADTVAAMRSSKNRKKGTMMLKPATVNTERYMEPMIDKTIPAIKPRMPRPPGHTIFVQQDGEKPH 750
V R+TV R K DL A D++ ++G CGR + L +P RT++R +G+ S+L +RG K+ V+P+L++ K RVG+A+ +H+ DDM +VHVDEKWF+ + YL PGE AP ++KRFI+KV+FL+AV R R+ WFDGKIG + VAA R+S+NR GT+ +P +V Y +IDK IP IK + P G + +QQD +PH
Sbjct: 54 VHRSTVQRVWKRACVDLNHATRPCSDVASRKKGHCGRNLKHQDVAVRLQAIPKSRRTTFRSIAAAMGMSRSTLHDYYRRGIFVKYTSTVRPMLTEANKAVRVGWAMGLIHASDHGEYTFDDMMEYVHVDEKWFFATRVSKRYYLAPGE-APPHRTCKSKRFISKVMFLSAVARPRLNDDTGEWFDGKIGTWHFTEKVAAARTSRNRPAGTLETQPVSVTRPVYKAMLIDKVIPTIKSKWPSSAGRNVIIQQDNARPH 309
BLAST of mRNA_D-mesarthrocarpus_Contig90.17.1 vs. uniprot
Match: A0A485LTD1_9STRA (Aste57867_25464 protein n=4 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LTD1_9STRA) HSP 1 Score: 152 bits (384), Expect = 1.990e-39 Identity = 98/258 (37.98%), Postives = 148/258 (57.36%), Query Frame = 1
Query: 7 SRTTVFR-HSKADDLQKADGQ-PMDMSRGRQGRCGRPNTVT------DLWEVPSMSRTSYRKRVVKLGVPLSSLWRLCKRGA-RKHKRWVKPVLSDKQKRDRVGFALSNMHSKGGSGVVVDDMYNWVHVDEKWFYVINNGRGIYLHPGEDAPQKPRAQNKRFITKVIFLAAVTRSRMI-SYEMWFDGKIGI*PTADTVAAMRSSKNRKKGTMMLKPATVNTERYMEPMIDKTIPAIKPRMPRPPGHTIFVQQDGEKPH 750
+ TT+ R H++A + G + ++ ++G+ GR + T L +VP +RT+ R + G+ + +L R K G R H ++P+LSD K R+ ALS + S +V++DM N+VH+DEKWFY+ R YL PGE P++ + ++KRFITKV+FL+AV R R I +W+DGKIG P ++V A R+S NR GT KP TV + Y E +IDK +PAI + P+ T+ +Q D + H
Sbjct: 47 NETTIRRIHARAKEQGATSGNMKVSVANKKKGKVGRKHAFTAAQIKAKLLQVPLANRTTLRAITEQSGISMGTLHRCLKLGLFRAHSNAIRPILSDANKYCRMKHALSFV----SSDMVMNDMLNYVHLDEKWFYLSKATRTFYLVPGEREPER-KCKSKRFITKVMFLSAVARPRYIHDTGLWWDGKIGTWPFVESVTAQRASVNRPAGTYETKPITVTKDVYREFIIDKVLPAIAAKWPKI-DRTVLLQHDNARAH 298
BLAST of mRNA_D-mesarthrocarpus_Contig90.17.1 vs. uniprot
Match: UPI000CD9BE6A (uncharacterized protein LOC111905831 n=2 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD9BE6A) HSP 1 Score: 148 bits (373), Expect = 3.090e-37 Identity = 107/260 (41.15%), Postives = 141/260 (54.23%), Query Frame = 1
Query: 1 GVSRTTVFRHSKADDLQKADGQPMDMSRGRQGRCGRPNTVTDLWEV---PSMSRTSYRKRVVKLGVPLSSLWRLCKRG-ARKHKRWVKPVLSDKQKRDRVGFALSNM-HSKGGSGVVVDDMYNWVHVDEKWFYVINNGRGIYLHPGEDAPQKPRAQNKRFITKVIFLAAVTRSRM--ISYEMWFDGKIGI*PTADTVAAMRSSKNRKKGTMMLKPA-TVNTERYMEPMIDKTIPAIKPRMPRPPGHT--IFVQQDGEKPH 750
GVS+ TV R LQ +G +D S + GR DL +V P RT+ + LG+ S+L R K G R +KP L+D K R+ F LS + S S DM+N +H+DEKWFY+ + + YL PGED P + ++K+FITKV+FLAAV R R + E++F GKIGI P A RSSKNR GT+ KP +V E +I+K +PAIK + P P HT IF+QQD KPH
Sbjct: 47 GVSKRTVSRIWNRAKLQVENGSIIDFSSKKLKVVGRKRVQLDLNQVSQIPLRRRTTIQSIAKSLGIVKSTLHRRIKEGDLRPRTNAIKPDLTDANKTKRLEFCLSMITRSLPESNTTFHDMFNVIHIDEKWFYISRSSKRYYLVPGEDEPLRT-CKSKKFITKVMFLAAVARLRFDALGNEIFF-GKIGIFPLTTKEPAKRSSKNRVAGTLETKPILSVTKEITRSWLIEKVLPAIKAKWP--PNHTGPIFIQQDNAKPH 302
BLAST of mRNA_D-mesarthrocarpus_Contig90.17.1 vs. uniprot
Match: W4FAY9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FAY9_9STRA) HSP 1 Score: 147 bits (372), Expect = 6.420e-37 Identity = 91/232 (39.22%), Postives = 131/232 (56.47%), Query Frame = 1
Query: 73 DMSRGRQGRCGRPNTVTDLWE----VPSMSRTSYRKRVVKLGVPLSSLWRLCKRGAR-KHKRWVKPVLSDKQKRDRVGFALSNMHSKGGSGVVVDDMYNWVHVDEKWFYVINNGRGIYLHPGEDAPQKPRAQNKRFITKVIFLAAVTRSRM-ISYEMWFDGKIGI*PTADTVAAMRSSKNRKKGTMMLKPATVNTERYMEPMIDKTIPAIKPRMPRPPGHTIFVQQDGEKPH 750
D++ ++GR GR +DL E +P RT+ + + VP S+L KRG +H VKP L++ K R+ +A + G ++V DM ++VHVDEKWFY+ + +YL PGE+ P + ++KRFITKV+FL+AV R R + WFDG+IG +V A RSS+NR TM+ P TV + Y + +ID IPAIK + P I +QQD +PH
Sbjct: 71 DVASRKKGRAGRKLKYSDLSERIAKIPKTDRTTIQAIAHVINVPKSTLQDYFKRGFLVRHSSSVKPQLTEANKAARLKWAFERL----GPDLMVHDMMDYVHVDEKWFYMTRVKKTLYLLPGEEPPHRS-TKSKRFITKVMFLSAVARPRWNYNTNEWFDGRIGTWHFTQSVPAQRSSRNRPSWTMVTVPCTVTRDTYRDMLIDNVIPAIKAKWPNDKAARILLQQDNARPH 297
BLAST of mRNA_D-mesarthrocarpus_Contig90.17.1 vs. uniprot
Match: W4GGI5_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGI5_9STRA) HSP 1 Score: 146 bits (369), Expect = 7.910e-37 Identity = 93/237 (39.24%), Postives = 130/237 (54.85%), Query Frame = 1
Query: 88 RQGRCGRP---------NTVTDLWEVPSMSRTSYRKRVVKLGVPLSSLW------RLCKRGARKHKRWVKPVLSDKQKRDRVGFALSNMHSKGGSGVVVDDMYNWVHVDEKWFYVINNGRGIYLHPGEDAPQKPRAQNKRFITKVIFLAAVTRSRM-ISYEMWFDGKIGI*PTADTVAAMRSSKNRKKGTMMLKPATVNTERYMEPMIDKTIPAIKPRMPRPPGHTIFVQQDGEKPH 750
++ RCG P N VT+ VPS R+++R G+P +SLW +LC+R +R VKP+LS KQK DR F + G V D+ ++VH++EKWFY+ YL E PQ+ + Q+KR ITKV+FL AV R R + +DGKIG+ P +T A R SKNR +GT + P TV Y ++DK IPAI+ + P G TI++QQ+ +PH
Sbjct: 6 KKSRCGAPRKYDGDSVRNVVTN---VPSYRRSNFRSLAAATGIPNTSLWNLLQANKLCRRTSR-----VKPMLSVKQKSDRFKFVQKFVRVGHGRYRVWHDVLDYVHLNEKWFYITQINHRDYLWHDEPIPQR-KVQSKRHITKVMFLCAVARPRFDFGRRVMWDGKIGLWPIVETKVAARRSKNRDRGTPVTVPMTVTKPIYRRLLVDKVIPAIQAKWPGQRGGTIYLQQNNARPH 233
BLAST of mRNA_D-mesarthrocarpus_Contig90.17.1 vs. uniprot
Match: UPI000B78B07A (uncharacterized protein LOC110692558 n=2 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B78B07A) HSP 1 Score: 146 bits (369), Expect = 1.670e-36 Identity = 96/256 (37.50%), Postives = 137/256 (53.52%), Query Frame = 1
Query: 1 GVSRTTVFRHSKADDLQKADGQPMDMSRGRQGRCGRPNTVTDLW---EVPSMSRTSYRKRVVKLGVPLSSLWRLCKRGARK-HKRWVKPVLSDKQKRDRVGFALSNMHSKGGSGVVVDDMYNWVHVDEKWFYVINNGRGIYLHPGEDAPQKPRAQNKRFITKVIFLAAVTRSRM-ISYEMWFDGKIGI*PTADTVAAMRSSKNRKKGTMMLKPAT-VNTERYMEPMIDKTIPAIKPRMPRPPGHTIFVQQDGEKPH 750
GV RTT++R SK +G ++M + R G+ DL E+P R + R + LGV S++ R K G K H +KP L++ ++R+ + L + G + +DMYN +H+DEKWFY+ + YL PGE P + ++KRF+TKV+FL AV R + E FDGKIG+ P V A R S+NR GT+ LKP T V E Y +I + IPAI + P I++QQD +PH
Sbjct: 44 GVYRTTIYRISKQAKALWQNGDAVNMDSKKPKRVGKKGKHIDLSKISEIPFHKRGNIRALAIALGVSKSTIHRFIKSGQIKPHTNALKPALTENNIKERLKWCLKAIDQDNG---MFNDMYNTIHLDEKWFYMTKGTQRYYLLPGETQPYRT-CKSKRFVTKVMFLCAVARPQFNADGECIFDGKIGMFPFVRWVPAKRRSRNRPAGTLELKPVTSVTKEAYRNMLIRQVIPAIMQKWPDNDQGPIYLQQDNARPH 295
BLAST of mRNA_D-mesarthrocarpus_Contig90.17.1 vs. uniprot
Match: A0A6P6W4A9_COFAR (uncharacterized protein LOC113730015 isoform X1 n=12 Tax=Coffea TaxID=13442 RepID=A0A6P6W4A9_COFAR) HSP 1 Score: 145 bits (365), Expect = 4.940e-36 Identity = 103/258 (39.92%), Postives = 137/258 (53.10%), Query Frame = 1
Query: 4 VSRTTVFRHSKADDLQKADGQPMDMSRGRQGRCGRPNTVTD---LWEVPSMSRTSYRKRVVKLGVPLSSLWRLCKRGA-RKHKRWVKPVLSDKQKRDRVGFALSNMHSKG-GSGVVVDDMYNWVHVDEKWFYVINNGRGIYLHPGEDAPQKPRAQNKRFITKVIFLAAVTRSRM-ISYEMWFDGKIGI*PTADTVAAMRSSKNRKKGTMMLKPA-TVNTERYMEPMIDKTIPAIKPRMPRPPGHT--IFVQQDGEKPH 750
S TV R K + DG+ +D+SR RCGR D + +P RT+ R ++ V S+L R K GA R H +KP L+D+ K+ R+ F LS + + S M+N VH+DEKWFY+ YLHP E+ P + ++K+FI KV+FLAAV R R S FDGKIGI P A RSSKNR GT+ KP +V E Y +I++ +PAI + PR G I +QQD KPH
Sbjct: 29 TSVRTVQRIWKLAAITSTDGR-VDVSRRFSKRCGRKRVDIDFTLIMAIPLRRRTNIRSLSSEMKVSKSTLHRRIKEGAIRPHSNALKPQLTDQNKQVRLNFCLSMLEPESLNSNPTFMSMFNVVHIDEKWFYMTKECEKYYLHPQEEEPLRT-CKSKKFIVKVMFLAAVARPRFDCSGNPTFDGKIGIFPFVFKEPAKRSSKNRMAGTLETKPILSVTKEVYRRCLIEQVLPAIHAKWPRDGGSVTEILIQQDNAKPH 284
BLAST of mRNA_D-mesarthrocarpus_Contig90.17.1 vs. uniprot
Match: A0A1R3HQ96_9ROSI (Transposase, Tc1-like protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3HQ96_9ROSI) HSP 1 Score: 142 bits (359), Expect = 5.840e-36 Identity = 100/256 (39.06%), Postives = 136/256 (53.12%), Query Frame = 1
Query: 4 VSRTTVFRHSKADDLQKADGQPMDMSRGRQGRCGRPNTVTD---LWEVPSMSRTSYRKRVVKLGVPLSSLWRLCKRG-ARKHKRWVKPVLSDKQKRDRVGFALSNMH--SKGGSGVVVDDMYNWVHVDEKWFYVINNGRGIYLHPGEDAPQKPRAQNKRFITKVIFLAAVTRSRMI-SYEMWFDGKIGI*PTADTVAAMRSSKNRKKGTMMLKPATVNTERYMEPMIDKTIPAIKPRMPRPPGHTIFVQQDGEKPH 750
VS T+ R K L +G +++S G GR + D + E+P RT+ R L + S++ R K G R H VKP L+D+ K+ R+ F LS + + G + + D M+N VH+DEKWF++ YL P ED P + ++KRFITKV+FLAAV R R S + F GKIGI P A R SKNR GTM KP V + MI+K +PAIK + P T+++QQD KPH
Sbjct: 53 VSPKTIGRIWKQAKLCMENGLIVNVSSKLTGNVGRKKILIDPRKVSEIPLRRRTNIRSIAKALNMSKSTVHRRVKEGFIRAHSNAVKPDLTDENKKTRLEFCLSKLDLTNAGINTIPFDGMFNQVHIDEKWFFMTRESERYYLLPEEDEPVRT-CKSKRFITKVMFLAAVARPRFDESGNVKFSGKIGIFPFVHKEPAKRKSKNRIAGTMETKPMLVTKDVTRAYMIEKILPAIKSKWPDKM-ETVYIQQDNAKPH 306
BLAST of mRNA_D-mesarthrocarpus_Contig90.17.1 vs. uniprot
Match: W2NW41_PHYPR (HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NW41_PHYPR) HSP 1 Score: 144 bits (364), Expect = 1.230e-35 Identity = 101/260 (38.85%), Postives = 144/260 (55.38%), Query Frame = 1
Query: 10 RTTVFR----HSKADDLQKADGQPMDMSRGRQGRCGRPNTVTD-----LWEVPSMSRTSYRKRVVKLGVPLSSLWRLCKRGA-RKHKRWVKPVLSDKQKRDRVGFALSNMHSKGGSGVVVDDMYNWVHVDEKWFYVINNGRGIYLHPGEDAPQKPRAQNKRFITKVIFLAAVTRSRMISY-EMWFDGKIGI*PTADTVAAMRSSKNRKKGTMMLKPA-TVNTERYMEPMIDKTIPAIKPRMPRP-PGHTIFVQQDGEKPH 750
R+T+ R H K + G ++ G G CGR TD + ++P R + + LGV + + RL K GA R+H VKP L+++ + RV FALS+ K G +V DM++ VH+DEKWF + + YL E+ P + R Q+KRFI+K +F+AAV R R ++ + FDGKIGI A+ A R+SKNR KGT++L+ +V+ E Y I IPAIK + PR TI++QQD KPH
Sbjct: 43 RSTISRLWELHKKTQTEENRLGN---LASGLIGNCGRKAIDTDELRLQIRKIPLSRRMTIKSLAAALGVSTTVIRRLLKEGAFRRHSSNVKPALTEENRLARVQFALSHTTRKRGGEMVFADMFDVVHIDEKWFNEDTDRKCYYLDADEEEPVRQR-QSKRFISKTMFIAAVARPRYDAHRKQAFDGKIGIWAFAEEYEAKRTSKNRPKGTIVLRNVESVDREAYKATHIGDIIPAIKAKWPRSGKKRTIYIQQDNAKPH 298 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig90.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig90.17.1 >prot_D-mesarthrocarpus_Contig90.17.1 ID=prot_D-mesarthrocarpus_Contig90.17.1|Name=mRNA_D-mesarthrocarpus_Contig90.17.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=161bp MDMSRGRQGRCGRPNTVTDLWEVPSMSRTSYRKRVVKLGVPLSSLWRLCKback to top mRNA from alignment at D-mesarthrocarpus_Contig90:28571..29669+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig90.17.1 ID=mRNA_D-mesarthrocarpus_Contig90.17.1|Name=mRNA_D-mesarthrocarpus_Contig90.17.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1099bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig90:28571..29669+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig90:28571..29669+ >mRNA_D-mesarthrocarpus_Contig90.17.1 ID=mRNA_D-mesarthrocarpus_Contig90.17.1|Name=mRNA_D-mesarthrocarpus_Contig90.17.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=483bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig90:28571..29669+ (Discosporangium mesarthrocarpum MT17_79)back to top |