mRNA_D-mesarthrocarpus_Contig90.17.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig90.17.1
Unique NamemRNA_D-mesarthrocarpus_Contig90.17.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig90.17.1 vs. uniprot
Match: A0A6A5ATA6_9STRA (HTH_Tnp_Tc3_2 domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ATA6_9STRA)

HSP 1 Score: 160 bits (405), Expect = 4.160e-42
Identity = 99/260 (38.08%), Postives = 144/260 (55.38%), Query Frame = 1
Query:    1 GVSRTTVFRHSKADDLQKADGQPMDMSRGRQGRCGR--PNTVTDLW----EVPSMSRTSYRKRVVKLGVPLSSLWRLC--KRGARKHKRWVKPVLSDKQKRDRVGFALSNMHSKGGSGVVVDDMYNWVHVDEKWFYVINNGRGIYLHPGEDAPQKPRAQNKRFITKVIFLAAVTRSRM--ISYEMWFDGKIGI*PTADTVAAMRSSKNRKKGTMMLKPATVNTERYMEPMIDKTIPAIKPRMPRPPGHTIFVQQDGEKPH 750
            GVSR TV +  +     KA     D++  ++GRCGR    T++D+      VP + R ++    V  G+P ++LWR+   K+  R+  R +KP++++K K DR+ FA S +H    +G+V  DMY+ VH+DEKWFY+    R  YL   E  P + +  +KR I KV+FL AV R R       MW DGK+G+ P      A R SKNR +G ++  P  V    Y + ++D  IPAIK   P P  H I++QQD  +PH
Sbjct:   44 GVSRQTVSKIWRRGQRSKARNGLADVALKKKGRCGRRPSRTMSDIETAIKSVPPVLRRTFESLAVSSGIPRTTLWRVLQTKKLQRRTSR-LKPMVTEKHKADRLAFARSFVHGTSCNGMVWHDMYDRVHIDEKWFYLTEVNRRYYLWHDESTPVR-KCNSKRHIIKVMFLTAVARPRFDYARKTMW-DGKVGMWPFVAVRPAQRKSKNRARGALITTPIVVTKPFYRQYLLDHVIPAIKQAWPGPRAHPIYIQQDNARPH 300          
BLAST of mRNA_D-mesarthrocarpus_Contig90.17.1 vs. uniprot
Match: A0A6A4YXI9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YXI9_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.840e-39
Identity = 97/257 (37.74%), Postives = 139/257 (54.09%), Query Frame = 1
Query:    4 VSRTTVFRHSKAD--DLQKADGQPMDMSRGRQGRCGR----PNTVTDLWEVPSMSRTSYRKRVVKLGVPLSSLWRLCKRGAR-KHKRWVKPVLSDKQKRDRVGFALSNMHSKGGSGVVVDDMYNWVHVDEKWFYVINNGRGIYLHPGEDAPQKPRAQNKRFITKVIFLAAVTRSRMISYE-MWFDGKIGI*PTADTVAAMRSSKNRKKGTMMLKPATVNTERYMEPMIDKTIPAIKPRMPRPPGHTIFVQQDGEKPH 750
            V R+TV R  K    DL  A     D++  ++G CGR     +    L  +P   RT++R     +G+  S+L    +RG   K+   V+P+L++  K  RVG+A+  +H+        DDM  +VHVDEKWF+     +  YL PGE AP     ++KRFI+KV+FL+AV R R+      WFDGKIG     + VAA R+S+NR  GT+  +P +V    Y   +IDK IP IK + P   G  + +QQD  +PH
Sbjct:   54 VHRSTVQRVWKRACVDLNHATRPCSDVASRKKGHCGRNLKHQDVAVRLQAIPKSRRTTFRSIAAAMGMSRSTLHDYYRRGIFVKYTSTVRPMLTEANKAVRVGWAMGLIHASDHGEYTFDDMMEYVHVDEKWFFATRVSKRYYLAPGE-APPHRTCKSKRFISKVMFLSAVARPRLNDDTGEWFDGKIGTWHFTEKVAAARTSRNRPAGTLETQPVSVTRPVYKAMLIDKVIPTIKSKWPSSAGRNVIIQQDNARPH 309          
BLAST of mRNA_D-mesarthrocarpus_Contig90.17.1 vs. uniprot
Match: A0A485LTD1_9STRA (Aste57867_25464 protein n=4 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LTD1_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.990e-39
Identity = 98/258 (37.98%), Postives = 148/258 (57.36%), Query Frame = 1
Query:    7 SRTTVFR-HSKADDLQKADGQ-PMDMSRGRQGRCGRPNTVT------DLWEVPSMSRTSYRKRVVKLGVPLSSLWRLCKRGA-RKHKRWVKPVLSDKQKRDRVGFALSNMHSKGGSGVVVDDMYNWVHVDEKWFYVINNGRGIYLHPGEDAPQKPRAQNKRFITKVIFLAAVTRSRMI-SYEMWFDGKIGI*PTADTVAAMRSSKNRKKGTMMLKPATVNTERYMEPMIDKTIPAIKPRMPRPPGHTIFVQQDGEKPH 750
            + TT+ R H++A +     G   + ++  ++G+ GR +  T       L +VP  +RT+ R    + G+ + +L R  K G  R H   ++P+LSD  K  R+  ALS +     S +V++DM N+VH+DEKWFY+    R  YL PGE  P++ + ++KRFITKV+FL+AV R R I    +W+DGKIG  P  ++V A R+S NR  GT   KP TV  + Y E +IDK +PAI  + P+    T+ +Q D  + H
Sbjct:   47 NETTIRRIHARAKEQGATSGNMKVSVANKKKGKVGRKHAFTAAQIKAKLLQVPLANRTTLRAITEQSGISMGTLHRCLKLGLFRAHSNAIRPILSDANKYCRMKHALSFV----SSDMVMNDMLNYVHLDEKWFYLSKATRTFYLVPGEREPER-KCKSKRFITKVMFLSAVARPRYIHDTGLWWDGKIGTWPFVESVTAQRASVNRPAGTYETKPITVTKDVYREFIIDKVLPAIAAKWPKI-DRTVLLQHDNARAH 298          
BLAST of mRNA_D-mesarthrocarpus_Contig90.17.1 vs. uniprot
Match: UPI000CD9BE6A (uncharacterized protein LOC111905831 n=2 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD9BE6A)

HSP 1 Score: 148 bits (373), Expect = 3.090e-37
Identity = 107/260 (41.15%), Postives = 141/260 (54.23%), Query Frame = 1
Query:    1 GVSRTTVFRHSKADDLQKADGQPMDMSRGRQGRCGRPNTVTDLWEV---PSMSRTSYRKRVVKLGVPLSSLWRLCKRG-ARKHKRWVKPVLSDKQKRDRVGFALSNM-HSKGGSGVVVDDMYNWVHVDEKWFYVINNGRGIYLHPGEDAPQKPRAQNKRFITKVIFLAAVTRSRM--ISYEMWFDGKIGI*PTADTVAAMRSSKNRKKGTMMLKPA-TVNTERYMEPMIDKTIPAIKPRMPRPPGHT--IFVQQDGEKPH 750
            GVS+ TV R      LQ  +G  +D S  +    GR     DL +V   P   RT+ +     LG+  S+L R  K G  R     +KP L+D  K  R+ F LS +  S   S     DM+N +H+DEKWFY+  + +  YL PGED P +   ++K+FITKV+FLAAV R R   +  E++F GKIGI P      A RSSKNR  GT+  KP  +V  E     +I+K +PAIK + P  P HT  IF+QQD  KPH
Sbjct:   47 GVSKRTVSRIWNRAKLQVENGSIIDFSSKKLKVVGRKRVQLDLNQVSQIPLRRRTTIQSIAKSLGIVKSTLHRRIKEGDLRPRTNAIKPDLTDANKTKRLEFCLSMITRSLPESNTTFHDMFNVIHIDEKWFYISRSSKRYYLVPGEDEPLRT-CKSKKFITKVMFLAAVARLRFDALGNEIFF-GKIGIFPLTTKEPAKRSSKNRVAGTLETKPILSVTKEITRSWLIEKVLPAIKAKWP--PNHTGPIFIQQDNAKPH 302          
BLAST of mRNA_D-mesarthrocarpus_Contig90.17.1 vs. uniprot
Match: W4FAY9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FAY9_9STRA)

HSP 1 Score: 147 bits (372), Expect = 6.420e-37
Identity = 91/232 (39.22%), Postives = 131/232 (56.47%), Query Frame = 1
Query:   73 DMSRGRQGRCGRPNTVTDLWE----VPSMSRTSYRKRVVKLGVPLSSLWRLCKRGAR-KHKRWVKPVLSDKQKRDRVGFALSNMHSKGGSGVVVDDMYNWVHVDEKWFYVINNGRGIYLHPGEDAPQKPRAQNKRFITKVIFLAAVTRSRM-ISYEMWFDGKIGI*PTADTVAAMRSSKNRKKGTMMLKPATVNTERYMEPMIDKTIPAIKPRMPRPPGHTIFVQQDGEKPH 750
            D++  ++GR GR    +DL E    +P   RT+ +     + VP S+L    KRG   +H   VKP L++  K  R+ +A   +    G  ++V DM ++VHVDEKWFY+    + +YL PGE+ P +   ++KRFITKV+FL+AV R R   +   WFDG+IG      +V A RSS+NR   TM+  P TV  + Y + +ID  IPAIK + P      I +QQD  +PH
Sbjct:   71 DVASRKKGRAGRKLKYSDLSERIAKIPKTDRTTIQAIAHVINVPKSTLQDYFKRGFLVRHSSSVKPQLTEANKAARLKWAFERL----GPDLMVHDMMDYVHVDEKWFYMTRVKKTLYLLPGEEPPHRS-TKSKRFITKVMFLSAVARPRWNYNTNEWFDGRIGTWHFTQSVPAQRSSRNRPSWTMVTVPCTVTRDTYRDMLIDNVIPAIKAKWPNDKAARILLQQDNARPH 297          
BLAST of mRNA_D-mesarthrocarpus_Contig90.17.1 vs. uniprot
Match: W4GGI5_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGI5_9STRA)

HSP 1 Score: 146 bits (369), Expect = 7.910e-37
Identity = 93/237 (39.24%), Postives = 130/237 (54.85%), Query Frame = 1
Query:   88 RQGRCGRP---------NTVTDLWEVPSMSRTSYRKRVVKLGVPLSSLW------RLCKRGARKHKRWVKPVLSDKQKRDRVGFALSNMHSKGGSGVVVDDMYNWVHVDEKWFYVINNGRGIYLHPGEDAPQKPRAQNKRFITKVIFLAAVTRSRM-ISYEMWFDGKIGI*PTADTVAAMRSSKNRKKGTMMLKPATVNTERYMEPMIDKTIPAIKPRMPRPPGHTIFVQQDGEKPH 750
            ++ RCG P         N VT+   VPS  R+++R      G+P +SLW      +LC+R +R     VKP+LS KQK DR  F    +    G   V  D+ ++VH++EKWFY+       YL   E  PQ+ + Q+KR ITKV+FL AV R R      + +DGKIG+ P  +T  A R SKNR +GT +  P TV    Y   ++DK IPAI+ + P   G TI++QQ+  +PH
Sbjct:    6 KKSRCGAPRKYDGDSVRNVVTN---VPSYRRSNFRSLAAATGIPNTSLWNLLQANKLCRRTSR-----VKPMLSVKQKSDRFKFVQKFVRVGHGRYRVWHDVLDYVHLNEKWFYITQINHRDYLWHDEPIPQR-KVQSKRHITKVMFLCAVARPRFDFGRRVMWDGKIGLWPIVETKVAARRSKNRDRGTPVTVPMTVTKPIYRRLLVDKVIPAIQAKWPGQRGGTIYLQQNNARPH 233          
BLAST of mRNA_D-mesarthrocarpus_Contig90.17.1 vs. uniprot
Match: UPI000B78B07A (uncharacterized protein LOC110692558 n=2 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B78B07A)

HSP 1 Score: 146 bits (369), Expect = 1.670e-36
Identity = 96/256 (37.50%), Postives = 137/256 (53.52%), Query Frame = 1
Query:    1 GVSRTTVFRHSKADDLQKADGQPMDMSRGRQGRCGRPNTVTDLW---EVPSMSRTSYRKRVVKLGVPLSSLWRLCKRGARK-HKRWVKPVLSDKQKRDRVGFALSNMHSKGGSGVVVDDMYNWVHVDEKWFYVINNGRGIYLHPGEDAPQKPRAQNKRFITKVIFLAAVTRSRM-ISYEMWFDGKIGI*PTADTVAAMRSSKNRKKGTMMLKPAT-VNTERYMEPMIDKTIPAIKPRMPRPPGHTIFVQQDGEKPH 750
            GV RTT++R SK       +G  ++M   +  R G+     DL    E+P   R + R   + LGV  S++ R  K G  K H   +KP L++   ++R+ + L  +    G   + +DMYN +H+DEKWFY+    +  YL PGE  P +   ++KRF+TKV+FL AV R +     E  FDGKIG+ P    V A R S+NR  GT+ LKP T V  E Y   +I + IPAI  + P      I++QQD  +PH
Sbjct:   44 GVYRTTIYRISKQAKALWQNGDAVNMDSKKPKRVGKKGKHIDLSKISEIPFHKRGNIRALAIALGVSKSTIHRFIKSGQIKPHTNALKPALTENNIKERLKWCLKAIDQDNG---MFNDMYNTIHLDEKWFYMTKGTQRYYLLPGETQPYRT-CKSKRFVTKVMFLCAVARPQFNADGECIFDGKIGMFPFVRWVPAKRRSRNRPAGTLELKPVTSVTKEAYRNMLIRQVIPAIMQKWPDNDQGPIYLQQDNARPH 295          
BLAST of mRNA_D-mesarthrocarpus_Contig90.17.1 vs. uniprot
Match: A0A6P6W4A9_COFAR (uncharacterized protein LOC113730015 isoform X1 n=12 Tax=Coffea TaxID=13442 RepID=A0A6P6W4A9_COFAR)

HSP 1 Score: 145 bits (365), Expect = 4.940e-36
Identity = 103/258 (39.92%), Postives = 137/258 (53.10%), Query Frame = 1
Query:    4 VSRTTVFRHSKADDLQKADGQPMDMSRGRQGRCGRPNTVTD---LWEVPSMSRTSYRKRVVKLGVPLSSLWRLCKRGA-RKHKRWVKPVLSDKQKRDRVGFALSNMHSKG-GSGVVVDDMYNWVHVDEKWFYVINNGRGIYLHPGEDAPQKPRAQNKRFITKVIFLAAVTRSRM-ISYEMWFDGKIGI*PTADTVAAMRSSKNRKKGTMMLKPA-TVNTERYMEPMIDKTIPAIKPRMPRPPGHT--IFVQQDGEKPH 750
             S  TV R  K   +   DG+ +D+SR    RCGR     D   +  +P   RT+ R    ++ V  S+L R  K GA R H   +KP L+D+ K+ R+ F LS +  +   S      M+N VH+DEKWFY+       YLHP E+ P +   ++K+FI KV+FLAAV R R   S    FDGKIGI P      A RSSKNR  GT+  KP  +V  E Y   +I++ +PAI  + PR  G    I +QQD  KPH
Sbjct:   29 TSVRTVQRIWKLAAITSTDGR-VDVSRRFSKRCGRKRVDIDFTLIMAIPLRRRTNIRSLSSEMKVSKSTLHRRIKEGAIRPHSNALKPQLTDQNKQVRLNFCLSMLEPESLNSNPTFMSMFNVVHIDEKWFYMTKECEKYYLHPQEEEPLRT-CKSKKFIVKVMFLAAVARPRFDCSGNPTFDGKIGIFPFVFKEPAKRSSKNRMAGTLETKPILSVTKEVYRRCLIEQVLPAIHAKWPRDGGSVTEILIQQDNAKPH 284          
BLAST of mRNA_D-mesarthrocarpus_Contig90.17.1 vs. uniprot
Match: A0A1R3HQ96_9ROSI (Transposase, Tc1-like protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3HQ96_9ROSI)

HSP 1 Score: 142 bits (359), Expect = 5.840e-36
Identity = 100/256 (39.06%), Postives = 136/256 (53.12%), Query Frame = 1
Query:    4 VSRTTVFRHSKADDLQKADGQPMDMSRGRQGRCGRPNTVTD---LWEVPSMSRTSYRKRVVKLGVPLSSLWRLCKRG-ARKHKRWVKPVLSDKQKRDRVGFALSNMH--SKGGSGVVVDDMYNWVHVDEKWFYVINNGRGIYLHPGEDAPQKPRAQNKRFITKVIFLAAVTRSRMI-SYEMWFDGKIGI*PTADTVAAMRSSKNRKKGTMMLKPATVNTERYMEPMIDKTIPAIKPRMPRPPGHTIFVQQDGEKPH 750
            VS  T+ R  K   L   +G  +++S    G  GR   + D   + E+P   RT+ R     L +  S++ R  K G  R H   VKP L+D+ K+ R+ F LS +   + G + +  D M+N VH+DEKWF++       YL P ED P +   ++KRFITKV+FLAAV R R   S  + F GKIGI P      A R SKNR  GTM  KP  V  +     MI+K +PAIK + P     T+++QQD  KPH
Sbjct:   53 VSPKTIGRIWKQAKLCMENGLIVNVSSKLTGNVGRKKILIDPRKVSEIPLRRRTNIRSIAKALNMSKSTVHRRVKEGFIRAHSNAVKPDLTDENKKTRLEFCLSKLDLTNAGINTIPFDGMFNQVHIDEKWFFMTRESERYYLLPEEDEPVRT-CKSKRFITKVMFLAAVARPRFDESGNVKFSGKIGIFPFVHKEPAKRKSKNRIAGTMETKPMLVTKDVTRAYMIEKILPAIKSKWPDKM-ETVYIQQDNAKPH 306          
BLAST of mRNA_D-mesarthrocarpus_Contig90.17.1 vs. uniprot
Match: W2NW41_PHYPR (HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NW41_PHYPR)

HSP 1 Score: 144 bits (364), Expect = 1.230e-35
Identity = 101/260 (38.85%), Postives = 144/260 (55.38%), Query Frame = 1
Query:   10 RTTVFR----HSKADDLQKADGQPMDMSRGRQGRCGRPNTVTD-----LWEVPSMSRTSYRKRVVKLGVPLSSLWRLCKRGA-RKHKRWVKPVLSDKQKRDRVGFALSNMHSKGGSGVVVDDMYNWVHVDEKWFYVINNGRGIYLHPGEDAPQKPRAQNKRFITKVIFLAAVTRSRMISY-EMWFDGKIGI*PTADTVAAMRSSKNRKKGTMMLKPA-TVNTERYMEPMIDKTIPAIKPRMPRP-PGHTIFVQQDGEKPH 750
            R+T+ R    H K    +   G    ++ G  G CGR    TD     + ++P   R + +     LGV  + + RL K GA R+H   VKP L+++ +  RV FALS+   K G  +V  DM++ VH+DEKWF    + +  YL   E+ P + R Q+KRFI+K +F+AAV R R  ++ +  FDGKIGI   A+   A R+SKNR KGT++L+   +V+ E Y    I   IPAIK + PR     TI++QQD  KPH
Sbjct:   43 RSTISRLWELHKKTQTEENRLGN---LASGLIGNCGRKAIDTDELRLQIRKIPLSRRMTIKSLAAALGVSTTVIRRLLKEGAFRRHSSNVKPALTEENRLARVQFALSHTTRKRGGEMVFADMFDVVHIDEKWFNEDTDRKCYYLDADEEEPVRQR-QSKRFISKTMFIAAVARPRYDAHRKQAFDGKIGIWAFAEEYEAKRTSKNRPKGTIVLRNVESVDREAYKATHIGDIIPAIKAKWPRSGKKRTIYIQQDNAKPH 298          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig90.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A5ATA6_9STRA4.160e-4238.08HTH_Tnp_Tc3_2 domain-containing protein (Fragment)... [more]
A0A6A4YXI9_9STRA1.840e-3937.74Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A485LTD1_9STRA1.990e-3937.98Aste57867_25464 protein n=4 Tax=Aphanomyces stella... [more]
UPI000CD9BE6A3.090e-3741.15uncharacterized protein LOC111905831 n=2 Tax=Lactu... [more]
W4FAY9_9STRA6.420e-3739.22Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
W4GGI5_9STRA7.910e-3739.24Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]
UPI000B78B07A1.670e-3637.50uncharacterized protein LOC110692558 n=2 Tax=Cheno... [more]
A0A6P6W4A9_COFAR4.940e-3639.92uncharacterized protein LOC113730015 isoform X1 n=... [more]
A0A1R3HQ96_9ROSI5.840e-3639.06Transposase, Tc1-like protein n=1 Tax=Corchorus ol... [more]
W2NW41_PHYPR1.230e-3538.85HTH_Tnp_Tc3_2 domain-containing protein n=4 Tax=Ph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig90contigD-mesarthrocarpus_Contig90:28571..29669 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog157072.XP_008874808.1
Model size1099
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.89e-26
EggNOG OGs2CMKC@1|root,2QQNW@2759|Eukaryota
Cds size483
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791055.446823-UTR-D-mesarthrocarpus_Contig90:28570..286391680791055.446823-UTR-D-mesarthrocarpus_Contig90:28570..28639Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig90 28571..28639 +
1680791055.4733326-UTR-D-mesarthrocarpus_Contig90:29122..296691680791055.4733326-UTR-D-mesarthrocarpus_Contig90:29122..29669Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig90 29123..29669 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791055.4578364-CDS-D-mesarthrocarpus_Contig90:28639..291221680791055.4578364-CDS-D-mesarthrocarpus_Contig90:28639..29122Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig90 28640..29122 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig90.17.1prot_D-mesarthrocarpus_Contig90.17.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig90 28640..29122 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig90.17.1

>prot_D-mesarthrocarpus_Contig90.17.1 ID=prot_D-mesarthrocarpus_Contig90.17.1|Name=mRNA_D-mesarthrocarpus_Contig90.17.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=161bp
MDMSRGRQGRCGRPNTVTDLWEVPSMSRTSYRKRVVKLGVPLSSLWRLCK
RGARKHKRWVKPVLSDKQKRDRVGFALSNMHSKGGSGVVVDDMYNWVHVD
EKWFYVINNGRGIYLHPGEDAPQKPRAQNKRFITKVIFLAAVTRSRMISY
EMWFDGKIGI*
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mRNA from alignment at D-mesarthrocarpus_Contig90:28571..29669+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig90.17.1 ID=mRNA_D-mesarthrocarpus_Contig90.17.1|Name=mRNA_D-mesarthrocarpus_Contig90.17.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1099bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig90:28571..29669+ (Discosporangium mesarthrocarpum MT17_79)
GGAGTTTCCCGAACGACGGTTTTCCGTCATTCCAAGGCGGACGACCTCCA GAAGGCAGATGGACAACCTATGGACATGTCTCGAGGGCGCCAGGGGCGTT GTGGTCGCCCTAATACGGTGACCGACCTGTGGGAGGTGCCTTCAATGAGC CGCACGTCGTACCGCAAACGGGTGGTCAAATTGGGGGTCCCCCTCTCCTC GTTATGGCGCCTGTGCAAGCGGGGAGCGAGGAAGCACAAACGGTGGGTCA AGCCGGTGCTGTCAGACAAGCAGAAGCGTGATAGGGTGGGTTTTGCGCTG AGCAACATGCACAGTAAGGGAGGAAGTGGGGTGGTGGTGGACGACATGTA CAACTGGGTCCACGTGGATGAGAAGTGGTTCTACGTCATAAATAACGGGA GGGGAATCTACCTGCACCCAGGAGAGGACGCCCCCCAAAAGCCAAGAGCC CAGAACAAGCGATTCATCACCAAGGTGATCTTCCTTGCTGCTGTGACAAG GTCTAGGATGATCTCCTATGAGATGTGGTTTGACGGCAAGATCGGTATCT GACCCACCGCGGATACTGTGGCGGCAATGCGCAGCAGTAAGAACCGCAAG AAGGGCACTATGATGCTGAAACCAGCCACGGTCAACACAGAGAGGTACAT GGAACCCATGATCGACAAGACCATCCCCGCAATCAAGCCGAGAATGCCTA GACCACCAGGTCACACGATCTTCGTGCAGCAGGATGGTGAAAAGCCGCAC AAGGGGGGGGGGGGATGGAGGCAATTCAGGCAAAGGCGGGGGACAGCATC ATCCTGGAAACCCAGCCTGCCACTCACCTGACCTCAACGATCTTCGATTC TTCCACGCCATCCATCTGCTGAAGGAGGATTTGGGAATTCCGATTCCCAA GGATCTGGTGGGGGCCACAACGGAGGCCTTCGATGTCTACCCCCAGGAGA CACAAGAACGAGTCTGGCAGAGAATGTTCGCAGTCCTTGGGGAAGTCCTT GGTTCTAAGGGCGATAATTGTTACAGGTTGCTCCATTCGGGCAAGGAGAA GCTCGGTAGGGCAGGCAAATTTCCAATCAACGGGCGCGTGGATGAGGAA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig90:28571..29669+

>mRNA_D-mesarthrocarpus_Contig90.17.1 ID=mRNA_D-mesarthrocarpus_Contig90.17.1|Name=mRNA_D-mesarthrocarpus_Contig90.17.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=483bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig90:28571..29669+ (Discosporangium mesarthrocarpum MT17_79)
ATGGACATGTCTCGAGGGCGCCAGGGGCGTTGTGGTCGCCCTAATACGGT
GACCGACCTGTGGGAGGTGCCTTCAATGAGCCGCACGTCGTACCGCAAAC
GGGTGGTCAAATTGGGGGTCCCCCTCTCCTCGTTATGGCGCCTGTGCAAG
CGGGGAGCGAGGAAGCACAAACGGTGGGTCAAGCCGGTGCTGTCAGACAA
GCAGAAGCGTGATAGGGTGGGTTTTGCGCTGAGCAACATGCACAGTAAGG
GAGGAAGTGGGGTGGTGGTGGACGACATGTACAACTGGGTCCACGTGGAT
GAGAAGTGGTTCTACGTCATAAATAACGGGAGGGGAATCTACCTGCACCC
AGGAGAGGACGCCCCCCAAAAGCCAAGAGCCCAGAACAAGCGATTCATCA
CCAAGGTGATCTTCCTTGCTGCTGTGACAAGGTCTAGGATGATCTCCTAT
GAGATGTGGTTTGACGGCAAGATCGGTATCTGA
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