mRNA_D-mesarthrocarpus_Contig9.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig9.2.1 vs. uniprot
Match: D7G4R8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4R8_ECTSI) HSP 1 Score: 165 bits (417), Expect = 2.400e-38 Identity = 137/414 (33.09%), Postives = 214/414 (51.69%), Query Frame = 1
Query: 259 VTIEIEGIKRDYHQALE-SSAEDRMMLAD--------------------EIRYLQSQLSEGQTRTAQATSSALRLEHQLREEKSTNAKLESDIHQVNEKHRDLACRHQKLKYQVQSLGSTLKERDKSIQFFEQQRKDAEAVFHDVVARMETLLEAEAKKSVSAVKDLRNKAVHMKARLMEDLKQQTAACAELSEALSTSRGNVADLVCQIKTEAQEHKLALAAAAAREKLLEKELQESRDQVEMLSQSIAEVARQQSSLAMETANAKATAAVLEAKVDASELQRARNAGCEDECGRTPTFAPFPSVATTGSMWAGGLDWTCGGGTAFTEAHLARKLEEANVHISQLTTLLSKEVQRREEAELEVTNAQGLLDSSQQDLTGLKELGDRLEKLGNQSLIQIEEKDKRIIDLERELH 1437
V +I+ ++R+Y ALE SS E R + A+ + R LQ L++ + + T RL +LREEKS KL S++ Q ++ LA HQ+LK+Q Q L L +RD+ +Q + ++ +EA F + V RME+L+E EAK +A+K+LR+KA+ K RL ++++ L + ++ + ++L +++ + + AAAARE+ L +++R + + +SQS+AE R+QS L ETANAK A VLEAK A+E+ E LA KL+EA+ HIS+L T+L +EV+RRE AE EV+ AQG L SS+Q+L L+ L +LE++G S ++ + + LE ELH
Sbjct: 116 VDADIQELRREYQIALEDSSVECRQLQAELSHSKRRSSVLKGERDEQAAQSRSLQQALADAGAKELEVT----RLNEELREEKSRGVKLSSELAQAQQRLDALASSHQELKFQTQCLEKDLTQRDRRLQLADANKRKSEARFREAVTRMESLMEGEAKDCAAAIKNLRDKALLAKERLSTEVERLRGDNGHLRKGIAVAEARGSELELRLQAALKSKETDATAAAAREEALRATAEQARTRADTMSQSLAEAIREQSGLLTETANAKVAAEVLEAKSRAAEV----------------------------------------------ENMLAEKLQEASTHISELRTVLRQEVRRREAAEAEVSEAQGYLKSSRQELGELRHLAWKLEQMGRNSFAHMDGNSQAVSHLEGELH 479
BLAST of mRNA_D-mesarthrocarpus_Contig9.2.1 vs. uniprot
Match: A0A6H5KLZ7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLZ7_9PHAE) HSP 1 Score: 133 bits (335), Expect = 4.550e-28 Identity = 141/465 (30.32%), Postives = 226/465 (48.60%), Query Frame = 1
Query: 1189 LARKLEEANVHISQLTTLLSKEVQRREEAELEVTNAQGL--LDSSQQDLTGLK-ELGDRLE-------KLGNQSLIQIEEKDKRII--------DLERELHKAAQVVCAMPAPAPSPIAPLSKEKGVE--MLRNVSTLRSCLRGMKAQVQDGQETVKQLLSKALAALQVDIEK---------EIKIKVMRKITNATTQLEREKEMRKSILMAMQGVSSTLLEKVGLSLPASLVDETVYEEPSQARSIRGGIEEFVTGLDQVLAGRQAKSPLKDQSPPKGFASTALETSTAACLSPRQSDDWGTRSKDDFRMLAELKKIETESEVQSLKTHLEEMKMKLSRAVDERNALARHLTSSREAEGRMKVELERMASKHSADFSTVEVRLAQETARCQDLRSRLARMAREHQVIMKESEGKHLLARQELEKIHEEMGNVRNDLERERARRRRVEHRYKELEDASSLTPSSL 2496
LA KL+EA+ HIS+L T+L +EV+RRE AE EV+ AQG +D + Q + L+ EL R + G L + E +D R + E + A ++CA P LS KG + L ++ LR+ LR + Q+ + + + + V +E+ + + + R+ + A +++ ++ ++G+SS LL+++ +++P L E Q + G+EE + L+ + K K P + + + C+S WG RSKDDF MLA+L+KIE ES++QSL+ L++M K SRA+ ++ + T RE + R K EL R A HS S +EV LA E + CQDLR +L R REHQV + + + + L + +RE ARR R++ +Y ELED ++P S+
Sbjct: 375 LADKLQEASTHISELRTVLRQEVRRREAAEAEVSEAQGFAHMDGNSQAVRHLEGELHARGVAGTVGGGEAGRGPLREEEREDGRSMLSGGRARGRSEGGGKEEAGLLCARRRRVPQG---LSSWKGGQRLFLAALAGLRAELRCVNTQLGKAKAENEVFVRHCTERVAVRVERLERAVRQAGQKQAEAQRQASEAEAAGAIDRKSADTLKRVVKGISSILLDRLAVTMPTYLRGGEEAGERGQ-EMLERGLEELTAAVTDALS--KVKERAKQAVPAQPHGDSLAPGNGRYCMSTVDGMVWGERSKDDFNMLAQLQKIEAESKLQSLQARLDDMTEKYSRAIADQETV--DSTPLREEQERAKQELARAARAHSGIVSALEVTLAAEKSHCQDLRLKLERQTREHQVALADVDQRLLQTQXXXXXXXXXXXXXXXXXDRECARRARLDKKYSELEDRGLVSPRSV 831 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig9.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig9.2.1 >prot_D-mesarthrocarpus_Contig9.2.1 ID=prot_D-mesarthrocarpus_Contig9.2.1|Name=mRNA_D-mesarthrocarpus_Contig9.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=891bp MSVHTDVRPDLELFKSKYEALRETYEGRLLKLAEWVQHANSSDRLQVANDback to top mRNA from alignment at D-mesarthrocarpus_Contig9:16293..25336+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig9.2.1 ID=mRNA_D-mesarthrocarpus_Contig9.2.1|Name=mRNA_D-mesarthrocarpus_Contig9.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=9044bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9:16293..25336+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig9:16293..25336+ >mRNA_D-mesarthrocarpus_Contig9.2.1 ID=mRNA_D-mesarthrocarpus_Contig9.2.1|Name=mRNA_D-mesarthrocarpus_Contig9.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=2673bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig9:16293..25336+ (Discosporangium mesarthrocarpum MT17_79)back to top |