mRNA_D-mesarthrocarpus_Contig8978.4.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig8978.4.1
Unique NamemRNA_D-mesarthrocarpus_Contig8978.4.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig8978.4.1 vs. uniprot
Match: D8LI02_ECTSI (Prolyl endopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI02_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 1.130e-12
Identity = 30/54 (55.56%), Postives = 38/54 (70.37%), Query Frame = 1 
Query:   25 LIYLDIRGFDSGDMSTLGREEKLVDTFDSQHQYIANEGCTFWFRSNLHAPRCKV 186
            L Y D+  FD  D+ T+G+  KLVD FDS + Y+ NEG TFWFRSN+ AP+ KV
Sbjct:  307 LFYRDLSAFDGHDVGTMGKVVKLVDNFDSLYDYVTNEGRTFWFRSNMDAPKYKV 360
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BLAST of mRNA_D-mesarthrocarpus_Contig8978.4.1 vs. uniprot
Match: A0A835YIC5_9STRA (Prolyl endopeptidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIC5_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 5.400e-12
Identity = 31/54 (57.41%), Postives = 39/54 (72.22%), Query Frame = 1 
Query:   25 LIYLDIRGFDSGDMSTLGREEKLVDTFDSQHQYIANEGCTFWFRSNLHAPRCKV 186
            L YLD+  FD   ++TLGR  KLVD F++++ YI NEG TFWF +NL APR KV
Sbjct:  294 LFYLDMSRFDGASVATLGRLVKLVDKFENKYSYITNEGRTFWFLTNLDAPRYKV 347
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BLAST of mRNA_D-mesarthrocarpus_Contig8978.4.1 vs. uniprot
Match: A0A6S8K7V0_DUNTE (Prolyl endopeptidase n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A6S8K7V0_DUNTE)

HSP 1 Score: 51.6 bits (122), Expect = 5.130e-6
Identity = 20/34 (58.82%), Postives = 28/34 (82.35%), Query Frame = 1 
Query:   85 EKLVDTFDSQHQYIANEGCTFWFRSNLHAPRCKV 186
            +KLVD FD+ + Y+ANEG TF+F++NL APR K+
Sbjct:  359 KKLVDNFDASYSYVANEGTTFYFKTNLKAPRYKI 392
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BLAST of mRNA_D-mesarthrocarpus_Contig8978.4.1 vs. uniprot
Match: A0A176VFC7_MARPO (Prolyl endopeptidase n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VFC7_MARPO)

HSP 1 Score: 50.4 bits (119), Expect = 1.310e-5
Identity = 25/60 (41.67%), Postives = 34/60 (56.67%), Query Frame = 1 
Query:   25 LIYLDIRGFDSGDMSTLGREE-----KLVDTFDSQHQYIANEGCTFWFRSNLHAPRCKVS 189
            L Y D+    +G     G  +     KLVD FD+Q+ Y+AN+G  F F SN  AP+CKV+
Sbjct:  304 LYYCDLTSLPAGLEGFRGSTDMLPFQKLVDNFDAQYTYVANDGSVFTFTSNKDAPKCKVT 363
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BLAST of mRNA_D-mesarthrocarpus_Contig8978.4.1 vs. uniprot
Match: A0A0D2NUB1_9CHLO (Prolyl endopeptidase n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2NUB1_9CHLO)

HSP 1 Score: 50.1 bits (118), Expect = 1.780e-5
Identity = 24/51 (47.06%), Postives = 31/51 (60.78%), Query Frame = 1 
Query:   34 LDIRGFDSGDMSTLGREEKLVDTFDSQHQYIANEGCTFWFRSNLHAPRCKV 186
            LD   FD           KLVD FD+ + Y+ANEG TF+F++NL APR +V
Sbjct:  299 LDFSRFDFFGSGEKLPVSKLVDDFDASYDYVANEGDTFYFKTNLEAPRYRV 349
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BLAST of mRNA_D-mesarthrocarpus_Contig8978.4.1 vs. uniprot
Match: UPI0001CBA062 (prolyl endopeptidase-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBA062)

HSP 1 Score: 48.5 bits (114), Expect = 6.280e-5
Identity = 24/54 (44.44%), Postives = 36/54 (66.67%), Query Frame = 1 
Query:   25 LIYLDIRGFDSGDMSTLGREEKLVDTFDSQHQYIANEGCTFWFRSNLHAPRCKV 186
            L Y D++    G +  L    KLVD FD++++YIANEG  F F++NL++PR K+
Sbjct:  260 LYYCDMKTLTDG-IKGLIPWVKLVDNFDAEYEYIANEGTLFTFKTNLNSPRYKL 312
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig8978.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LI02_ECTSI1.130e-1255.56Prolyl endopeptidase n=1 Tax=Ectocarpus siliculosu... [more]
A0A835YIC5_9STRA5.400e-1257.41Prolyl endopeptidase n=1 Tax=Tribonema minus TaxID... [more]
A0A6S8K7V0_DUNTE5.130e-658.82Prolyl endopeptidase n=1 Tax=Dunaliella tertiolect... [more]
A0A176VFC7_MARPO1.310e-541.67Prolyl endopeptidase n=2 Tax=Marchantia polymorpha... [more]
A0A0D2NUB1_9CHLO1.780e-547.06Prolyl endopeptidase n=1 Tax=Monoraphidium neglect... [more]
UPI0001CBA0626.280e-544.44prolyl endopeptidase-like n=1 Tax=Saccoglossus kow... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig8978contigD-mesarthrocarpus_Contig8978:4824..5012 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LI02
Preferred namePREP
PFAMsPeptidase_S9,Peptidase_S9_N
Model size189
Max annot lvl2759|Eukaryota
KEGG koko:K01322
KEGG Pathwayko04614,map04614
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009966,GO:0010646,GO:0016787,GO:0016788,GO:0017171,GO:0019538,GO:0023051,GO:0033218,GO:0042277,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0048583,GO:0050789,GO:0050794,GO:0052689,GO:0065007,GO:0070011,GO:0070012,GO:0071704,GO:0140096,GO:1901564
Exons1
Evalue1.86e-13
EggNOG OGsCOG1505@1|root,KOG2237@2759|Eukaryota
EC3.4.21.26
Descriptionserine-type exopeptidase activity
Cds size189
COG categoryE
BRITEko00000,ko00001,ko01000,ko01002
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791050.9007046-CDS-D-mesarthrocarpus_Contig8978:4823..50121680791050.9007046-CDS-D-mesarthrocarpus_Contig8978:4823..5012Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig8978 4824..5012 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig8978.4.1prot_D-mesarthrocarpus_Contig8978.4.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig8978 4824..5012 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig8978.4.1

>prot_D-mesarthrocarpus_Contig8978.4.1 ID=prot_D-mesarthrocarpus_Contig8978.4.1|Name=mRNA_D-mesarthrocarpus_Contig8978.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=63bp
MNINAYVTLIYLDIRGFDSGDMSTLGREEKLVDTFDSQHQYIANEGCTFW
FRSNLHAPRCKVS
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mRNA from alignment at D-mesarthrocarpus_Contig8978:4824..5012-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig8978.4.1 ID=mRNA_D-mesarthrocarpus_Contig8978.4.1|Name=mRNA_D-mesarthrocarpus_Contig8978.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=189bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig8978:4824..5012- (Discosporangium mesarthrocarpum MT17_79)
ATGAACATAAACGCCTATGTAACGCTGATCTACTTGGACATTCGTGGCTT
TGACAGCGGTGACATGAGCACCCTGGGCAGGGAGGAGAAATTGGTGGACA
CCTTTGATTCGCAGCACCAATACATCGCCAATGAGGGGTGCACCTTCTGG
TTCAGGTCCAACCTACATGCCCCACGCTGCAAGGTGTCT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig8978:4824..5012-

>mRNA_D-mesarthrocarpus_Contig8978.4.1 ID=mRNA_D-mesarthrocarpus_Contig8978.4.1|Name=mRNA_D-mesarthrocarpus_Contig8978.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=189bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig8978:4824..5012- (Discosporangium mesarthrocarpum MT17_79)
ATGAACATAAACGCCTATGTAACGCTGATCTACTTGGACATTCGTGGCTT
TGACAGCGGTGACATGAGCACCCTGGGCAGGGAGGAGAAATTGGTGGACA
CCTTTGATTCGCAGCACCAATACATCGCCAATGAGGGGTGCACCTTCTGG
TTCAGGTCCAACCTACATGCCCCACGCTGCAAGGTGTCT
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