mRNA_D-mesarthrocarpus_Contig8968.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig8968.2.1 vs. uniprot
Match: D8LFL3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFL3_ECTSI) HSP 1 Score: 182 bits (461), Expect = 7.770e-47 Identity = 133/206 (64.56%), Postives = 151/206 (73.30%), Query Frame = 1
Query: 1 GGAAAAAV---WTLEEVVNRPDGLEHLATPLHAAAEGGHHALVYALLERGADPRAEDVRGRVPYTLAPGREVRDAFRRARAAAPGRWDWEEARVPEPLTDELEQRRKVKEREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAIR----RKELRLAAAGCCDSCGDSLLDNKEAFSRYDYRYCSIQCTQTHKRRLAADAAERRSLG 597
GGAAA A WT E++N PDG E L TPLH AA GGH A++ LLERGA P AEDVRGRVPY LAP ++ RDAFRRARA P RWDW+ ARVPEPLT+ELE R XXXXXXXX XXXXXXXXXXXXXXXXXXXX R++ LAAAG CD+CG +L+ K+AFSR+++RYCS C HKR+LAADAAERR G
Sbjct: 506 GGAAAGAAATGWTAGEILNHPDGFERLMTPLHVAAAGGHVAVLGVLLERGASPLAEDVRGRVPYLLAPNKDTRDAFRRARAGQPERWDWDAARVPEPLTEELELRXXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRKRGLAAAGHCDACGKALVA-KKAFSRFEFRYCSTDCANLHKRKLAADAAERRFNG 710
BLAST of mRNA_D-mesarthrocarpus_Contig8968.2.1 vs. uniprot
Match: A0A0G4GCR6_VITBC (C2H2-type domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GCR6_VITBC) HSP 1 Score: 123 bits (308), Expect = 1.910e-26 Identity = 98/179 (54.75%), Postives = 116/179 (64.80%), Query Frame = 1
Query: 73 ATPLHAAAEGGHHALVYALLERGADPRAEDVRGRVPYTLAPGREVRDAFRRARAAAP-GRWDWEEARVPEPLTDELEQRRKVKEREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAIRRKELRLAA------AGCCDSCGDSLLDNKEAFSRYDYRYCSIQCTQTHKRRLAADAAERR 588
AT LHAAAEGGH LV LL G DP + D+RGRVPY + +E RDAFRR RA AP RWDW +A +PEPLT++LE R+K XXXXXXXXXX XXXXXXXXXXXX + E R A A CDSC + + F R +Y+YCS++C Q HKRRL A+AAE+R
Sbjct: 490 ATALHAAAEGGHDVLVLLLLRCGLDPCSLDMRGRVPYFVCKTKECRDAFRRYRAEAPPDRWDWHKACIPEPLTEDLEARKKEXXXXXXXXXXXXXXASKAVEKXXXXXXXXXXXXXXXXQTEAREKALEAERLARICDSCSAPITG--KPFQRLEYKYCSVECVQRHKRRLMAEAAEKR 666
BLAST of mRNA_D-mesarthrocarpus_Contig8968.2.1 vs. uniprot
Match: A0A7S3HE92_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HE92_9STRA) HSP 1 Score: 108 bits (269), Expect = 2.000e-21 Identity = 103/195 (52.82%), Postives = 119/195 (61.03%), Query Frame = 1
Query: 31 LEEVVNRPDGLEHLATPLHAAAEGGHHALVYALLERGADPRAEDVRGRVPYTLAPGREVRDAFRRARAAAPG--RWDWEEARVPEPLTDELEQRRKVKEREXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------EAIRRKELRLAAAGCCDSCGDSLLDNKEAFSRYDYRYCSIQCTQTHKRRLAADAAERR 588
L V++ DGL HL TPLHAAAE G LV LL GA P D+RGR Y +A +E RDAFRR RA G RWDW A V L++E EQ +K++E+ XXXXXXXX XXXXXXXXXXXXXXXXXX EA +R E AG C SC SL K A YDY+ C C +R+LAADAA +R
Sbjct: 511 LHVVLDLVDGLTHLTTPLHAAAERGMSDLVTQLLTLGASPMPSDIRGRTSYFVAKDKETRDAFRRYRATPEGEDRWDWNAAGVGAALSEETEQAKKLREKXXXXXXXXXAAQXXXXXXXXXXXXXXXXXXXLVAQQEEAKQRAENARFNAGVCASCNVSLY-GKLALDLYDYKCCGGACVMQLRRKLAADAAMKR 704
BLAST of mRNA_D-mesarthrocarpus_Contig8968.2.1 vs. uniprot
Match: A0A1V9YUC8_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YUC8_9STRA) HSP 1 Score: 104 bits (259), Expect = 2.970e-20 Identity = 95/173 (54.91%), Postives = 114/173 (65.90%), Query Frame = 1
Query: 70 LATPLHAAAEGGHHALVYALLERGADPRAEDVRGRVPYTLAPGREVRDAFRRARAAAPGRWDWEEARVPEPLTDELEQRRKVKEREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAIRRKELRLAAAGCCDSCGDSLLDNKEAFSRYDYRYCSIQCTQTHKRRLAADAAERR 588
L TPLH A+E G AL+ LL+ GADP A D R RVPY L +E R+AFRR R AP +WD++ A+VP+ LTD++++ R+ ER XXXXXXXXXXXXXXXXXXXXXXXXXXXX A R KE + AA C+ CG + F R + YCS C HKR L A AA R
Sbjct: 419 LRTPLHVASEAGAAALITLLLQHGADPCALDARSRVPYFLCGAKEARNAFRRYRGVAPEQWDYDAAKVPDALTDDVDEARR--ERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAARRAKEAKEAA---CEMCGQP--SGAKPFLRLTFMYCSTACVTAHKRELMAQAALSR 584
BLAST of mRNA_D-mesarthrocarpus_Contig8968.2.1 vs. uniprot
Match: A0A813GRE5_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813GRE5_POLGL) HSP 1 Score: 101 bits (252), Expect = 2.250e-19 Identity = 79/178 (44.38%), Postives = 98/178 (55.06%), Query Frame = 1
Query: 64 EHLATPLHAAAEGGHHALVYALLERGADPRAEDVRGRVPYTLAPGREVRDAFRRARAAAPGRWDWEEARVPEPLTDELEQRRKVKEREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAIRRKELRLAAAGCCDSCGDSLLDNKEAFSRYDYRYCSIQCTQTHKRRLAADAAERRSLG 597
+ L T LHAAA L+ ALL+ GA+P D +GRVPY L + RDAFRR R + WDW EARVP+ + DE +Q+++ KE XXXXXXXXXXX E RK L AA CDSC L+ + FSR + YCS C +TH R L A+AA +R G
Sbjct: 414 DELYTALHAAAAAEDEELLTALLDDGANPCVRDGKGRVPYHLCYTQRTRDAFRRYRGSNEEEWDWGEARVPDGINDETDQKKREKEXXXXXXXXXXXXXNKVQAKEEADEKLRKDEEE---RKMLE-AAQSKCDSCSKPLVS--KPFSRLSFLYCSPDCVKTHMRELQAEAAMKRFSG 585
BLAST of mRNA_D-mesarthrocarpus_Contig8968.2.1 vs. uniprot
Match: A0A485LI13_9STRA (Aste57867_21144 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LI13_9STRA) HSP 1 Score: 100 bits (248), Expect = 7.430e-19 Identity = 90/188 (47.87%), Postives = 112/188 (59.57%), Query Frame = 1
Query: 28 TLEEVVNRPDGLEHLATPLHAAAEGGHHALVYALLERGADPRAEDVRGRVPYTLAPGREVRDAFRRARAAAPGRWDWEEARVPEPLTDELEQRRKVKEREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAIRR-KELRLAAAGCCDSCGDSLLDNKEAFSRYDYRYCSIQCTQTHKRRLAADAAERR 588
T E VN DG L T LH AA+ ++ LL GADP D RVPY A ++ R+ FRR R AAP RWD++ A++P LTDE+E+ K +E+E XXXXXXXXXXXXXXX XXXXXX A RR KEL C CG+ + F R +++YCS +C HKR+L ADAA +R
Sbjct: 416 TTEANVNATDGT--LRTALHVAAQHNLIDVLERLLAAGADPCMGDDHQRVPYFFASTKDARNVFRRFRGAAPDRWDYDAAKIPAALTDEMEEAAKAREKEKXXXXXXXXXXXXXXXDQLXXXXXXAAAEAAARRAKEL------ACAMCGEP--SGAKPFVRLEFKYCSTKCVNDHKRQLMADAAIKR 593
BLAST of mRNA_D-mesarthrocarpus_Contig8968.2.1 vs. uniprot
Match: A0A024U2N7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U2N7_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.800e-18 Identity = 92/171 (53.80%), Postives = 110/171 (64.33%), Query Frame = 1
Query: 76 TPLHAAAEGGHHALVYALLERGADPRAEDVRGRVPYTLAPGREVRDAFRRARAAAPGRWDWEEARVPEPLTDELEQRRKVKEREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAIRRKELRLAAAGCCDSCGDSLLDNKEAFSRYDYRYCSIQCTQTHKRRLAADAAERR 588
T LH A++ H + LL+ GA P A D R RVPY L +E R+AFRR RA AP RWD+ A+VP+ LTDE+E+ +K K + XXXXXXXXXXXXXXXXXXXXXXXXXXXXX RR A C +CG + FSR Y YCS C HKR+L A+AA +R
Sbjct: 435 TALHVASQMNHVEAIDLLLKHGASPCALDARQRVPYLLTTSKEGRNAFRRFRADAPDRWDYVVAKVPDALTDEMEEEKKAKAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRR-----AKESACAACGQP--SGAKPFSRLTYIYCSTACVNNHKRQLMAEAAMKR 598
BLAST of mRNA_D-mesarthrocarpus_Contig8968.2.1 vs. uniprot
Match: A0A8J5JB74_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5JB74_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.850e-18 Identity = 84/173 (48.55%), Postives = 106/173 (61.27%), Query Frame = 1
Query: 76 TPLHAAAEGGHHALVYALLERGADPRAEDVRGRVPYTLAPGREVRDAFRRARAAAPGRWDWEEARVPEPLTDELEQRRKVKEREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAIRRKEL--RLAAAGCCDSCGDSLLDNKEAFSRYDYRYCSIQCTQTHKRRLAADAAERR 588
T LH AA +V LL++GA+P D+ R PY L +E R+AFRR PG WD+ A++PE LT E+EQR+K KE XXXXXXXXXXXXXXXXX XX EA R++EL ++AA CD CG K FSR +++YCS C HKR+L ++AA RR
Sbjct: 419 TALHYAAAKNAVPMVEYLLDQGANPALLDLHNRPPYFLCNSKECRNAFRRYMGEHPGAWDYATAQIPEGLTSEMEQRKKEKE-------XXXXXXXXXXXXXXXXXAAEXXRIEAERQEELERKIAAGLACDFCGKYA--GKSPFSRLEFKYCSTDCVNGHKRKLMSEAALRR 582
BLAST of mRNA_D-mesarthrocarpus_Contig8968.2.1 vs. uniprot
Match: H3GCM0_PHYRM (Calponin-homology (CH) domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GCM0_PHYRM) HSP 1 Score: 98.2 bits (243), Expect = 4.190e-18 Identity = 91/171 (53.22%), Postives = 112/171 (65.50%), Query Frame = 1
Query: 76 TPLHAAAEGGHHALVYALLERGADPRAEDVRGRVPYTLAPGREVRDAFRRARAAAPGRWDWEEARVPEPLTDELEQRRKVKEREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAIRRKELRLAAAGCCDSCGDSLLDNKEAFSRYDYRYCSIQCTQTHKRRLAADAAERR 588
T LH AA +V LLE+GA+P D+ R PY L +E R+AFRR A PG WD+ A++PE LT E+EQR+K E+EXXXXXXXXXXXXXXXXXXXXXXXXXXX E + RK +AA CD CG K F+R +++YCS C HKR+L ++AA RR
Sbjct: 425 TALHHAAAKNEVPIVEYLLEQGANPALLDLHNRPPYFLCDTKEARNAFRRYMAEHPGAWDYAIAQIPEGLTSEMEQRKK--EKEXXXXXXXXXXXXXXXXXXXXXXXXXXXRQEELERK---IAAGLACDFCGKYA--GKSPFTRLEFKYCSTDCVNGHKRKLMSEAALRR 588
BLAST of mRNA_D-mesarthrocarpus_Contig8968.2.1 vs. uniprot
Match: A0A0N7L385_PLAHL (Ankyrin repeat protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L385_PLAHL) HSP 1 Score: 97.1 bits (240), Expect = 7.420e-18 Identity = 82/171 (47.95%), Postives = 106/171 (61.99%), Query Frame = 1
Query: 76 TPLHAAAEGGHHALVYALLERGADPRAEDVRGRVPYTLAPGREVRDAFRRARAAAPGRWDWEEARVPEPLTDELEQRRKVKEREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAIRRKELRLAAAGCCDSCGDSLLDNKEAFSRYDYRYCSIQCTQTHKRRLAADAAERR 588
T LH AA G ++V LL +GA+P D+ GR PY L ++ R+AFR+ P WD+ AR+PE LT ++EQR+K KE E XXXXXXXXXXXXXXXXXXXXX E E ++AA CD CG+ K F+R +++YCS C HKR+L ++AA RR
Sbjct: 418 TALHHAAAKGTVSMVEYLLNQGANPALLDLHGRPPYFLCNSKDTRNAFRQYMGEHPNAWDYVMARIPEVLTSDMEQRKKEKEAEKRXXXXXXXXXXXXXXXXXXXXXI-----EQQEELERKIAAGLACDLCGNYA--GKSPFTRLEFKYCSTDCVNGHKRQLMSEAALRR 581 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig8968.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig8968.2.1 >prot_D-mesarthrocarpus_Contig8968.2.1 ID=prot_D-mesarthrocarpus_Contig8968.2.1|Name=mRNA_D-mesarthrocarpus_Contig8968.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=204bp GGAAAAAVWTLEEVVNRPDGLEHLATPLHAAAEGGHHALVYALLERGADPback to top mRNA from alignment at D-mesarthrocarpus_Contig8968:423..4406- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig8968.2.1 ID=mRNA_D-mesarthrocarpus_Contig8968.2.1|Name=mRNA_D-mesarthrocarpus_Contig8968.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3984bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig8968:423..4406- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig8968:423..4406- >mRNA_D-mesarthrocarpus_Contig8968.2.1 ID=mRNA_D-mesarthrocarpus_Contig8968.2.1|Name=mRNA_D-mesarthrocarpus_Contig8968.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=612bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig8968:423..4406- (Discosporangium mesarthrocarpum MT17_79)back to top |