mRNA_D-mesarthrocarpus_Contig8962.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig8962.1.1 vs. uniprot
Match: UPI001420DA94 (DNRLRE domain-containing protein n=1 Tax=Paraflavitalea devenefica TaxID=2716334 RepID=UPI001420DA94) HSP 1 Score: 80.5 bits (197), Expect = 1.400e-13 Identity = 47/128 (36.72%), Postives = 69/128 (53.91%), Query Frame = 1
Query: 262 NVVENLVDNSINTRWSARGEGESFTIDLGQKTPLAGIFLSIYEGDQRTQNFEVLDG----NGQPLIQRRKTSGKSQDLEFYPFDSDADTSVIKFIGYGNMKGGMTSTWNSISGVELCGAMTVTSNGGT 633
NV N++DN +NTRWSA G+G+ LG+ + G+ ++ Y GD RT F+VL G N + R +SG S +LE + F S ++ G+GN + WNS + V++ T TS GGT
Sbjct: 490 NVPANVLDNDLNTRWSANGDGQWIQFCLGETATVTGVQIAFYNGDTRTSTFDVLTGTDGVNWTTVAAGRVSSGTSLNLETFTF-SARTAKYVRIAGHGNS----VNLWNSYTEVKI---QTQTSGGGT 609
BLAST of mRNA_D-mesarthrocarpus_Contig8962.1.1 vs. uniprot
Match: A0A7W5AZD7_9BACL (Probable pectate lyase C n=1 Tax=Paenibacillus phyllosphaerae TaxID=274593 RepID=A0A7W5AZD7_9BACL) HSP 1 Score: 79.7 bits (195), Expect = 2.770e-13 Identity = 44/126 (34.92%), Postives = 67/126 (53.17%), Query Frame = 1
Query: 241 ASKHSQNNVVENLVDNSINTRWSARGEGESFTIDLGQKTPLAGIFLSIYEGDQRTQNFEV---LDGNG----QPLIQRRKTSGKSQDLEFYPFDSDADTSVIKFIGYGNMKGGMTSTWNSISGVEL 597
+S NVVEN++DN+++TRWSA GEG+ DLGQ + + ++ Y G R FE+ +DG I+ +SG + E + FD + ++FIGYGN + WNSIS + +
Sbjct: 970 SSSSDDGNVVENIIDNNLDTRWSASGEGQWAIADLGQVRSVNSVSMAFYNGQMRKTIFELEVSVDGEQWTKVYDKIEGGNSSGTTNGFELFVFDESHNARYVRFIGYGNN----LNLWNSISELRI 1091
BLAST of mRNA_D-mesarthrocarpus_Contig8962.1.1 vs. uniprot
Match: UPI001C08CBD5 (polysaccharide lyase family 7 protein n=1 Tax=Colwellia sp. E2M01 TaxID=2841561 RepID=UPI001C08CBD5) HSP 1 Score: 79.3 bits (194), Expect = 2.940e-13 Identity = 37/112 (33.04%), Postives = 65/112 (58.04%), Query Frame = 1
Query: 262 NVVENLVDNSINTRWSARGEGESFTIDLGQKTPLAGIFLSIYEGDQRTQNFEVL----DGNGQPLIQRRKTSGKSQDLEFYPFDSDADTSVIKFIGYGNMKGGMTSTWNSIS 585
N EN +D+ ++TRWSA G G+ ++DLG + L+G+ ++ Y+G R+ +FE+ + N + +SG S LE + F+ D +++ GYGN ++TWNS++
Sbjct: 159 NGAENTIDSDLDTRWSANGNGQWLSLDLGSEQELSGVDIAFYKGSDRSSDFEIEVSTDNSNWVQAVSLTASSGGSIGLERFDFNQTLDARYVRYTGYGNS----SNTWNSVT 266
BLAST of mRNA_D-mesarthrocarpus_Contig8962.1.1 vs. uniprot
Match: Q21KL0_SACD2 (Putative polysaccharide lyase n=2 Tax=Saccharophagus degradans TaxID=86304 RepID=Q21KL0_SACD2) HSP 1 Score: 78.6 bits (192), Expect = 6.280e-13 Identity = 45/144 (31.25%), Postives = 78/144 (54.17%), Query Frame = 1
Query: 196 PEACKDVQIDSDSLSASKHSQNNVVENLVDNSINTRWSARGEGESFTIDLGQKTPLAGIFLSIYEGDQRTQNFEVL---DGNGQPLIQRRKTSGKSQDLEFYPFDSDADTSVIKFIGYGNMKGGMTSTWNSISGVELCGAMTVT 618
PE + Q+D S+ AS NV N +D S++TRWSA G G++ T +LG + + ++ Y+GDQR+ F++ DG+ + ++SG + LE + + ++ +GYGN ++WNSI+ VE+ G ++
Sbjct: 158 PEPPVEGQLDVHSVVASSD-DGNVASNTLDGSLSTRWSANGNGQTITYNLGSMQLVKSVSMAFYKGDQRSATFDIQVSPDGSNFSTVFSGESSGNTLALEEFDIPN-MPAQFVRIVGYGNS----ANSWNSITEVEIYGGGDIS 295
BLAST of mRNA_D-mesarthrocarpus_Contig8962.1.1 vs. uniprot
Match: UPI001C8C8C04 (discoidin domain-containing protein n=1 Tax=Kibdelosporangium aridum TaxID=2030 RepID=UPI001C8C8C04) HSP 1 Score: 75.1 bits (183), Expect = 6.870e-13 Identity = 43/119 (36.13%), Postives = 65/119 (54.62%), Query Frame = 1
Query: 262 NVVENLVDNSINTRWSARGEGESFTIDLGQKTPLAGIFLSIYEGDQRTQNFEV-LDGNGQP---LIQRRKTSGKSQDLEFYPFDSDADTSVIKFIGYGNMKGGMTSTWNSISGVELCGA 606
NV N +DN++NTRWSA G+G DLG + + ++ ++GD RT +FEV L G+G ++ RR SG + LE + F D ++ +GYGN + W SI+ + GA
Sbjct: 46 NVPANTLDNNLNTRWSAEGDGVWIQYDLGTAQTIGSVSIAWHKGDTRTSSFEVRLSGDGSSWTTVLPRRSASGSTLQLENHDFP-DRSGRYLRVVGYGNT----VNAWTSITEATVNGA 159
BLAST of mRNA_D-mesarthrocarpus_Contig8962.1.1 vs. uniprot
Match: A0A3B7MSD5_9BACT (T9SS C-terminal target domain-containing protein n=1 Tax=Paraflavitalea soli TaxID=2315862 RepID=A0A3B7MSD5_9BACT) HSP 1 Score: 77.8 bits (190), Expect = 1.150e-12 Identity = 45/128 (35.16%), Postives = 68/128 (53.12%), Query Frame = 1
Query: 262 NVVENLVDNSINTRWSARGEGESFTIDLGQKTPLAGIFLSIYEGDQRTQNFEVLDGNG----QPLIQRRKTSGKSQDLEFYPFDSDADTSVIKFIGYGNMKGGMTSTWNSISGVELCGAMTVTSNGGT 633
NV N++DN +NTRWSA G+G+ LG + G+ ++ Y G+ RT F+VL GN R +SG S +LE + F + + ++ +G+GN + WNS S V++ T T GGT
Sbjct: 492 NVPANVLDNDLNTRWSANGDGQWIQFCLGDTLSVTGVQIAFYSGNTRTSTFDVLTGNDGTNWTTASAGRVSSGTSVNLETFSF-TPRNAKYVRIVGHGNS----VNLWNSYSEVKI---QTQTGGGGT 611
BLAST of mRNA_D-mesarthrocarpus_Contig8962.1.1 vs. uniprot
Match: A0A2K2ZCC5_9FLAO (F5/8 type C domain-containing protein n=1 Tax=Formosa algae TaxID=225843 RepID=A0A2K2ZCC5_9FLAO) HSP 1 Score: 76.6 bits (187), Expect = 2.430e-12 Identity = 47/139 (33.81%), Postives = 78/139 (56.12%), Query Frame = 1
Query: 229 DSLSASKHSQNNVVENLVDNSINTRWSARGEGESFTIDLGQKTPLAGIFLSIYEGDQRTQNFEV-LDGNGQP---LIQRRKTSGKSQDLEFYPFDSDADTSVIKFIGYGNMKGGMTSTWNSISGVELCGA---MTVTSN 624
DS+SAS+ ++N EN +D+ +TRWSA G+G++ T DLG ++ + ++ + GD R FE+ + NG L + + SG ++D E + D+ T ++ IGYGN S W S++ V + G ++VT N
Sbjct: 338 DSVSASEAQESNGPENTLDDDFDTRWSAEGDGQTITYDLGALNTVSLLKIAFHNGDSRKTYFEIAVSENGTDFTKLTEELENSGTTKDYENFMIDATR-TRYVQVIGYGNEN----SAWTSLAEVRIYGIDSKLSVTDN 471
BLAST of mRNA_D-mesarthrocarpus_Contig8962.1.1 vs. uniprot
Match: UPI001B8693A3 (carbohydrate-binding protein n=1 Tax=Colwellia echini TaxID=1982103 RepID=UPI001B8693A3) HSP 1 Score: 76.6 bits (187), Expect = 2.940e-12 Identity = 47/136 (34.56%), Postives = 75/136 (55.15%), Query Frame = 1
Query: 241 ASKHSQNNVVENLVDNSINTRWSARGEGESFTIDLGQKTPLAGIFLSIYEGDQRTQNFEVL---DGNGQPLIQRRKTSGKSQDLEFYPFDSDADTSV---IKFIGYGNMKGGMTSTWNSISGVELCGAMTVTSNGG 630
+S + N EN +DN+++TRWSA G+GE DLGQ + I ++ Y+GD+RT F+VL DG+ + SG F+ ++SV ++ +GYGN +++WNSI+ V++ +V SN G
Sbjct: 29 SSSSNDGNGPENTIDNNLDTRWSANGDGEYLQYDLGQSVNIESIDIAFYKGDERTSTFDVLTSADGSSWTTVY----SGTQDTSTTSQFNVALESSVGQYVQVVGYGNT----SNSWNSITEVDI-NTSSVISNPG 155
BLAST of mRNA_D-mesarthrocarpus_Contig8962.1.1 vs. uniprot
Match: A0A846U9Q9_9BURK (Unsaturated chondroitin disaccharide hydrolase n=4 Tax=Rhizobacter TaxID=212743 RepID=A0A846U9Q9_9BURK) HSP 1 Score: 76.3 bits (186), Expect = 3.220e-12 Identity = 41/125 (32.80%), Postives = 69/125 (55.20%), Query Frame = 1
Query: 232 SLSASKHSQNNVVENLVDNSINTRWSARGEGESFTIDLGQKTPLAGIFLSIYEGDQRTQNFEVL---DGNGQPLIQRRKTSGKSQDLEFYPFDSDADTSVIKFIGYGNMKGGMTSTWNSISGVEL 597
++SA+ N N +DNS+ TRWSA G+G++ T+DLG + + ++ Y GDQR+ F++ DGNG R +SG++ E+Y +D ++ G+G+ S WNSI+ + +
Sbjct: 408 AVSATSAQAGNPAANAIDNSLATRWSAEGDGQAITLDLGSGRAIQKVGVAFYLGDQRSARFDIATSPDGNGWTTRWRGISSGQTTAEEYYDI-TDVTARYVRITGHGST----ASQWNSITELSV 527
BLAST of mRNA_D-mesarthrocarpus_Contig8962.1.1 vs. uniprot
Match: A0A1I1GLE2_9GAMM (F5/8 type C domain-containing protein n=3 Tax=Microbulbifer thermotolerans TaxID=252514 RepID=A0A1I1GLE2_9GAMM) HSP 1 Score: 76.3 bits (186), Expect = 3.880e-12 Identity = 44/129 (34.11%), Postives = 71/129 (55.04%), Query Frame = 1
Query: 220 IDSDSLSASKHSQNNVVENLVDNSINTRWSARGEGESFTIDLGQKTPLAGIFLSIYEGDQRTQNFEVL---DGNGQPLIQRRKTSGKSQDLEFYPFDSDADTSVIKFIGYGNMKGGMTSTWNSISGVEL 597
ID S++AS + N+ EN +DN++ TRWSA G+G+ DLG+ + + ++ Y+GDQRT E+ DGN I K+ DL+ + D D + ++ +GYGN ++ WNS + V +
Sbjct: 28 IDPVSVTASSN-DGNIPENTLDNNLETRWSAIGDGQWIEYDLGKNYIVKDVQIAFYKGDQRTATIEIQVSSDGNTWESIFYGDQPSKTLDLQIFDVD-DTEARYVRIVGYGNT----SNKWNSFTEVAI 150 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig8962.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig8962.1.1 >prot_D-mesarthrocarpus_Contig8962.1.1 ID=prot_D-mesarthrocarpus_Contig8962.1.1|Name=mRNA_D-mesarthrocarpus_Contig8962.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=207bp MTDGGNGNTDDGSDGSSMSDSNGGGGGGGGGGGSFYPEACKDVQIDSDSLback to top mRNA from alignment at D-mesarthrocarpus_Contig8962:55..2193+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig8962.1.1 ID=mRNA_D-mesarthrocarpus_Contig8962.1.1|Name=mRNA_D-mesarthrocarpus_Contig8962.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2139bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig8962:55..2193+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig8962:55..2193+ >mRNA_D-mesarthrocarpus_Contig8962.1.1 ID=mRNA_D-mesarthrocarpus_Contig8962.1.1|Name=mRNA_D-mesarthrocarpus_Contig8962.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=621bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig8962:55..2193+ (Discosporangium mesarthrocarpum MT17_79)back to top |