mRNA_D-mesarthrocarpus_Contig11265.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig11265.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig11265.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig11265.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig11265contigD-mesarthrocarpus_Contig11265:1121..3103 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size368
Hectar predicted targeting categorymitochondrion
Exons3
Cds size366
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789249.2880018-CDS-D-mesarthrocarpus_Contig11265:1121..12291680789249.2880018-CDS-D-mesarthrocarpus_Contig11265:1121..1229Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig11265 1122..1229 -
1680789249.3041058-CDS-D-mesarthrocarpus_Contig11265:2216..23991680789249.3041058-CDS-D-mesarthrocarpus_Contig11265:2216..2399Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig11265 2217..2399 -
1680789249.3132575-CDS-D-mesarthrocarpus_Contig11265:3028..31031680789249.3132575-CDS-D-mesarthrocarpus_Contig11265:3028..3103Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig11265 3029..3103 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig11265.1.1prot_D-mesarthrocarpus_Contig11265.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig11265 1122..3103 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig11265.1.1

>prot_D-mesarthrocarpus_Contig11265.1.1 ID=prot_D-mesarthrocarpus_Contig11265.1.1|Name=mRNA_D-mesarthrocarpus_Contig11265.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=122bp
RAALRRLVSAGTVFKASRLQEDSEKEISSEEGSSSTDDGFIPDSPPRGII
QEMKEGNKSHETGQGLSGAATEAEFRAGGGTRLVAKVASLPDVEMGEIAW
GKKAGAGAGAGAGAGVVTKGGH
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mRNA from alignment at D-mesarthrocarpus_Contig11265:1121..3103-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig11265.1.1 ID=mRNA_D-mesarthrocarpus_Contig11265.1.1|Name=mRNA_D-mesarthrocarpus_Contig11265.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1983bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11265:1121..3103- (Discosporangium mesarthrocarpum MT17_79)
CGGGCAGCATTGAGGCGCCTCGTGAGCGCCGGGACTGTGTTTAAGGCATC
AAGGCTGCAGGAGGACAGTGAGAAGGCGAGAGCAAACAATCTGCCCTGTA
CGCGCAAAGGGGGGTGGCGATGAAGTTATCTGCAGTGAAGTTGTGTACAG
TGTCCAGCTTCTCTACTTTTTTTTCTTTCTCTCATTCTTGTTTTTCCTTC
AGTTTTTTTTTTTTCGGGCTTTGACACTGTTGTGGGGGGTTGGGTCAGGC
GTAGGGTTAGTGTGAGGGTTGGAGCTGGGGCTGAGGCTGGGGCTGGGGTT
GGGGCAGGGGTTTAAACAGGGGGATGGATGGACGGTCATGAGACTTGTTG
CTGGGACTAAGGGTTAGGAGTTGGGATAGGCTTGGGGGGAGAGGGGGTGC
TAGAAAATGGCTCCAGAGTTTGACTCTAGGATCTAGGGCTGGGTGGAGAT
GGCACAAGGGGGGGTATTGATGGAAAGGGTTGAAAGAATCCATTTGTGTT
GATGGAGGATTTCTCGAGCTCCCTCCATTGCCCATTGATACCCTTGTTTT
CTCTGTTCTATGCCGCATGGATGTAGTGTTTTGCAAAAGGTTATTTTAGT
CTGTTTTTAGTTCATTTTTACTTTAGGAACCGCTTTGATCTCACCCCCTC
ACCCCATTTCTTGCTCCCCACCTCCCAAAAACACCCCTCCCCACCGCACC
CCAGGAAATCTCATCGGAGGAAGGGTCCTCCTCCACAGACGATGGGTTTA
TCCCCGATTCCCCACCCAGAGGAATCATCCAAGAGATGAAAGAGGGCAAT
AAATCACACGAGACAGGGCAGGGGCTGTCAGGGGCAGCGACAGAGGCGGA
GTTTAGGGCAGGGGGAGGCACACGTCTCGTGGCCAAGGTGTGCTGACGCC
AGTCATTTCCCTTACCCTAACCCCGTTGCCCTTGCCCCAGTCCTAATCCT
GAGCAAGGGAAGACGTTTGAGCCTTACCTGTAGTAGGAATGGAATGTTAG
TTCAGGGGGCGCCTTTGCCACCGTTGGCAAAACCAAGTTAGTGCCTGCCT
GCGCCTGACCCCTCTGTATCCCTGGAGCTCTCCGGTGTGACCATGAAGCG
CCCTGAAGTACCCTAAAGTGGTTATTTTGGATGATAGAGTTAAGCGAGGG
AGAAAAAAAGACAAAAGGGAGGGCAGGGTAGAGTAGAAGAGGAGGCCAAT
CCCACGGATGCGGTGGCCACAGCTATATAGACCAGAGGTCTGCCTGCCTA
CCCCACAAGAAGAGGCAGGCGGGGGGGGCGGGGCAGAGGTGCATAAAAGA
TCACACTGGACAACACAGCCAGGGTGGGGGGGGGGTTCTGTTGAATTAAT
TGCACTGTGCTGTGAAGCACTTGACAGAGAGGGCCGCGTGATGGAGTGCA
GCGGTGTAGTGCTAGGGCATGTGAACACCATCTTGAAAACCGGTGGAATC
TTCCGGCGAGTTCCTTGCGGCTTGCACCTGTTCCACCAGCAGACTGGCTC
TTTTTCTTTCCCCTTGTGTATCGCACGGATGACAGCAATTACACGCAAGG
GTATTACTGTACTACGATGTACCCTGCTGCACTCCACCACCCTTACGTGC
CCATGAATAGCTCTAGAGTGGTACATGGAGGTCTAGAGCGGTTTTGTGGA
GCTCTAGAGCGGTTCTATTGAGCTCTAGAGCTAGAGGACTACTGTAGAGC
ACGGTCCAGATCCCGGTCATCACGCCTTGGGGATAAGGTTTAGCAGCATT
GACCCCTGACTAACCGTAGTTCTGACCCTAACCCTATTCCACGACCATGG
CCTTGACCTTCTTACCACACATCCCCGCCAAACTTCTCTGCCCTCTCAAC
CCCTGTCCGGAACCCTAACCCAAGGTGGCTTCCCTCCCTGATGTAGAGAT
GGGGGAAATAGCTTGGGGAAAAAAGGCAGGGGCGGGGGCGGGGGCGGGGG
CGGGGGCAGGCGTGGTGACCAAGGGTGGCCACA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig11265:1121..3103-

>mRNA_D-mesarthrocarpus_Contig11265.1.1 ID=mRNA_D-mesarthrocarpus_Contig11265.1.1|Name=mRNA_D-mesarthrocarpus_Contig11265.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=366bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11265:1121..3103- (Discosporangium mesarthrocarpum MT17_79)
CGGGCAGCATTGAGGCGCCTCGTGAGCGCCGGGACTGTGTTTAAGGCATC
AAGGCTGCAGGAGGACAGTGAGAAGGAAATCTCATCGGAGGAAGGGTCCT
CCTCCACAGACGATGGGTTTATCCCCGATTCCCCACCCAGAGGAATCATC
CAAGAGATGAAAGAGGGCAATAAATCACACGAGACAGGGCAGGGGCTGTC
AGGGGCAGCGACAGAGGCGGAGTTTAGGGCAGGGGGAGGCACACGTCTCG
TGGCCAAGGTGGCTTCCCTCCCTGATGTAGAGATGGGGGAAATAGCTTGG
GGAAAAAAGGCAGGGGCGGGGGCGGGGGCGGGGGCGGGGGCAGGCGTGGT
GACCAAGGGTGGCCAC
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