mRNA_D-mesarthrocarpus_Contig11260.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig11260.2.1 vs. uniprot
Match: A0A2D7FLN9_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7FLN9_9PROT) HSP 1 Score: 195 bits (496), Expect = 4.320e-62 Identity = 93/115 (80.87%), Postives = 107/115 (93.04%), Query Frame = 1
Query: 79 MVTVVRLSDYKSANGRFKPDICFNKRELDQLLTVYSRRVMSGEWKDYAIRHDPTMAAFLIYRNNSRQPAFTVVKHHSNNGKTEFVVFHGRERLKRSDSLKEAVTVLSRKLKLVKK 423
MV VV LSDYKSA+ FKPDICFNK+ELDQLLTVYSRRV SGEWKDYAIRHDP +AAFLIYRNNS+QPAFT++KHH+N GKTEFVV+HGRERLKRSD+LK+ +TVL+RKLKLV++
Sbjct: 14 MVKVVSLSDYKSADRHFKPDICFNKQELDQLLTVYSRRVTSGEWKDYAIRHDPAIAAFLIYRNNSQQPAFTIIKHHTNGGKTEFVVYHGRERLKRSDALKDTLTVLNRKLKLVRR 128
BLAST of mRNA_D-mesarthrocarpus_Contig11260.2.1 vs. uniprot
Match: A0A2D8PUG0_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PUG0_9PROT) HSP 1 Score: 179 bits (453), Expect = 1.740e-55 Identity = 87/131 (66.41%), Postives = 110/131 (83.97%), Query Frame = 1
Query: 25 IGIIDVTNSSNTGIWPAPMVTVVRLSDYKSANGRFKPDICFNKRELDQLLTVYSRRVMSGEWKDYAIRHDPTMAAFLIYRNNSRQPAFTVVKHHSNNGKTEFVVFHGRERLKRSDSLKEAVTVLSRKLKLV 417
+GIID N + TG+ P+ M TVV L+DYK A+ R +PDICFNK+E D LL+VYSRRVMSGEWKDYAIRHDP+MAAFLIYRNNSRQP+FTVVK ++ ++EF+V+HGR+RLKR+ SL +A++VL RK KL+
Sbjct: 1 MGIIDCRNFA-TGVPPSQMSTVVSLADYKKASRRIRPDICFNKKEFDLLLSVYSRRVMSGEWKDYAIRHDPSMAAFLIYRNNSRQPSFTVVKRQTSGSRSEFLVYHGRQRLKRTASLSDALSVLKRKFKLI 130
BLAST of mRNA_D-mesarthrocarpus_Contig11260.2.1 vs. uniprot
Match: A0A3D2BP58_9PROT (Uncharacterized protein n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3D2BP58_9PROT) HSP 1 Score: 177 bits (450), Expect = 3.390e-55 Identity = 84/118 (71.19%), Postives = 105/118 (88.98%), Query Frame = 1
Query: 70 PAPMVTVVRLSDYKSANGRFKPDICFNKRELDQLLTVYSRRVMSGEWKDYAIRHDPTMAAFLIYRNNSRQPAFTVVKHHSNNGKTEFVVFHGRERLKRSDSLKEAVTVLSRKLKLVKK 423
P M TVVRL+DYK+AN R +PDICF+K+E DQLL+VYSRRVMSG+WKDYAIRH+PTMAAFLIYRNNSRQP+FT+VK +++ K E++V+HGRER+KRS SL +A++VL+RKLKLV K
Sbjct: 3 PTRMSTVVRLADYKNANRRIQPDICFDKKEFDQLLSVYSRRVMSGDWKDYAIRHEPTMAAFLIYRNNSRQPSFTIVKQKASSSKLEYLVYHGRERMKRSSSLTDALSVLTRKLKLVSK 120
BLAST of mRNA_D-mesarthrocarpus_Contig11260.2.1 vs. uniprot
Match: A0A2S6Q7M5_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6Q7M5_9PROT) HSP 1 Score: 164 bits (415), Expect = 6.170e-50 Identity = 81/115 (70.43%), Postives = 98/115 (85.22%), Query Frame = 1
Query: 79 MVTVVRLSDYKSANGRFKPDICFNKRELDQLLTVYSRRVMSGEWKDYAIRHDPTMAAFLIYRNNSRQPAFTVVKHHSNNGKTEFVVFHGRERLKRSDSLKEAVTVLSRKLKLVKK 423
M TVVRL+DYK+A R + DICF+K+E DQLL+VYSRRVMSG+WKDYAIRHDPTMAAF+IYRNNSRQP+FTVVK ++ K E++V+HGRERLKRS SL A++VL K+KLV K
Sbjct: 1 MSTVVRLADYKNATRRTQTDICFDKKEFDQLLSVYSRRVMSGDWKDYAIRHDPTMAAFMIYRNNSRQPSFTVVKRKASGSKLEYLVYHGRERLKRSLSLANALSVLKPKIKLVGK 115
BLAST of mRNA_D-mesarthrocarpus_Contig11260.2.1 vs. uniprot
Match: A0A2E6GL72_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GL72_9PROT) HSP 1 Score: 90.5 bits (223), Expect = 8.190e-21 Identity = 52/114 (45.61%), Postives = 69/114 (60.53%), Query Frame = 1
Query: 79 MVTVVRLSDYKSANGRFKPDICFNKRELDQLLTVYSRRVMSGEWKDYAIRHDPTMAAFLIYRNNSRQPAFTVVKHHSNNGKT-EFVVFHGRERLKRSDSLKEAVTVLSRKLKLV 417
M VVRL D+K + + F K EL+QLL+ YSRRV+SGEWKDYAI H M+AF IYR+ P FT+ K+ + ++VV G LKR L + ++V R+LKLV
Sbjct: 2 MPKVVRLKDFKRKDSSA---VYFTKNELNQLLSHYSRRVISGEWKDYAIDHGKGMSAFSIYRDTGTHPVFTIFKYAKGTHRNGDYVVGAGGNMLKRGKKLTDVLSVFDRQLKLV 112
BLAST of mRNA_D-mesarthrocarpus_Contig11260.2.1 vs. uniprot
Match: A0A7C2IKS2_9PROT (DUF2794 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7C2IKS2_9PROT) HSP 1 Score: 90.1 bits (222), Expect = 1.040e-20 Identity = 49/114 (42.98%), Postives = 76/114 (66.67%), Query Frame = 1
Query: 79 MVTVVRLSDYKSANGRFKPDICFNKRELDQLLTVYSRRVMSGEWKDYAIRHDPTMAAFLIYRNNSRQPAFTVVKHHSNNGKTEFVVFHGRERLKRSDSLKEAVTVLSRKLKLVK 420
M ++RL+D++ G+ + FN++EL +LL +YSRRV SGEWKDYAI MA F I+R++ +P F +VK + G E+VVF R +LK ++ EA++VL R+L+L++
Sbjct: 1 MSEMLRLADFR---GKRAQHVFFNRQELRKLLDLYSRRVASGEWKDYAIDQYGPMAVFSIFRHSFDRPLFAIVKRAAARG-CEYVVFSDRRKLKHGRTIDEALSVLERRLRLIR 110
BLAST of mRNA_D-mesarthrocarpus_Contig11260.2.1 vs. uniprot
Match: A0A6A7KPQ0_9PROT (DUF2794 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6A7KPQ0_9PROT) HSP 1 Score: 89.0 bits (219), Expect = 3.200e-20 Identity = 46/113 (40.71%), Postives = 72/113 (63.72%), Query Frame = 1
Query: 79 MVTVVRLSDYKSANGRFKPDICFNKRELDQLLTVYSRRVMSGEWKDYAIRHDPTMAAFLIYRNNSRQPAFTVVKHHSNNGKTEFVVFHGRERLKRSDSLKEAVTVLSRKLKLV 417
M +VRLS+++ G+ + F+++EL QLL VYSRRV SGEWKDYAI +A F I+R+ P FTV K N ++++F GRE++K ++ E +++ +R L+L+
Sbjct: 1 MADLVRLSEHRRNKGK---RVTFDRQELRQLLDVYSRRVASGEWKDYAIDLRHGVAVFSIFRHTFDLPVFTVAKRTGNGRHCDYLLFSGREQIKHGQTIGEVLSIFNRPLRLI 110
BLAST of mRNA_D-mesarthrocarpus_Contig11260.2.1 vs. uniprot
Match: UPI0015D4DBB1 (DUF2794 domain-containing protein n=1 Tax=Azospirillum oleiclasticum TaxID=2735135 RepID=UPI0015D4DBB1) HSP 1 Score: 88.2 bits (217), Expect = 6.940e-20 Identity = 47/111 (42.34%), Postives = 73/111 (65.77%), Query Frame = 1
Query: 88 VVRLSDYKSANGRFKPDICFNKRELDQLLTVYSRRVMSGEWKDYAIRHDPTMAAFLIYRNNSRQPAFTVVKHH-SNNGKTEFVVFHGRERLKRSDSLKEAVTVLSRKLKLV 417
++ LS+ + A+ R I F++ EL QLL +YS RV +GEW+DYAI H MA F I+R+ +P F +VK H + G E+ VF GR++L R+ +L++A+TV R +++V
Sbjct: 9 LIPLSERRKASRR----IYFDRVELSQLLQLYSSRVATGEWRDYAIDHGVGMAVFSIFRHTLERPLFAIVKTHGTGKGGAEYTVFTGRQKLARATTLRDALTVFDRPIRVV 115
BLAST of mRNA_D-mesarthrocarpus_Contig11260.2.1 vs. uniprot
Match: A0A5J6N2H3_9PROT (Uncharacterized protein n=1 Tax=Hypericibacter adhaerens TaxID=2602016 RepID=A0A5J6N2H3_9PROT) HSP 1 Score: 87.8 bits (216), Expect = 9.560e-20 Identity = 47/118 (39.83%), Postives = 77/118 (65.25%), Query Frame = 1
Query: 79 MVTVVRLSDYKSANGRFKPDICFNKRELDQLLTVYSRRVMSGEWKDYAIRHDPTMAAFLIYRNNSRQPAFTVVKHHSNNG-----KTEFVVFHGRERLKRSDSLKEAVTVLSRKLKLV 417
M +++RL++Y+ R + F++REL+QLL++YSRRVM GEW+DYAI H P MA F ++R++ +P F++ K S G + EF++ +GR RL R+ L++ + L L++V
Sbjct: 1 MSSLIRLAEYR----RQHRVVFFSRRELNQLLSLYSRRVMRGEWRDYAIDHRPGMAMFSVFRSSRERPLFSIAKRVSLTGPASEREAEFLLLNGRHRLGRASLLEDIIEQLESGLRVV 114
BLAST of mRNA_D-mesarthrocarpus_Contig11260.2.1 vs. uniprot
Match: A0A2E7QV02_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7QV02_9PROT) HSP 1 Score: 86.7 bits (213), Expect = 2.640e-19 Identity = 48/111 (43.24%), Postives = 67/111 (60.36%), Query Frame = 1
Query: 88 VVRLSDYKSANGRFKPDICFNKRELDQLLTVYSRRVMSGEWKDYAIRHDPTMAAFLIYRNNSRQPAFTVVKHHSNNGKT-EFVVFHGRERLKRSDSLKEAVTVLSRKLKLV 417
V+ L ++K N + F K EL+QLL+ YSRRV+SGEWKDYAI H M+AF IYR P FT+ K+ + ++VV + LKR +L E +++ R+LKLV
Sbjct: 5 VILLDEFKRKNSS---TVYFTKNELNQLLSQYSRRVISGEWKDYAIDHGKGMSAFSIYRETGTHPVFTISKYAKGTHRNGDYVVGAAGKMLKRGKNLSEVLSIFKRQLKLV 112 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig11260.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig11260.2.1 >prot_D-mesarthrocarpus_Contig11260.2.1 ID=prot_D-mesarthrocarpus_Contig11260.2.1|Name=mRNA_D-mesarthrocarpus_Contig11260.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=142bp MRLDELREIGIIDVTNSSNTGIWPAPMVTVVRLSDYKSANGRFKPDICFNback to top mRNA from alignment at D-mesarthrocarpus_Contig11260:1044..1469+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig11260.2.1 ID=mRNA_D-mesarthrocarpus_Contig11260.2.1|Name=mRNA_D-mesarthrocarpus_Contig11260.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=426bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11260:1044..1469+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig11260:1044..1469+ >mRNA_D-mesarthrocarpus_Contig11260.2.1 ID=mRNA_D-mesarthrocarpus_Contig11260.2.1|Name=mRNA_D-mesarthrocarpus_Contig11260.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=426bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11260:1044..1469+ (Discosporangium mesarthrocarpum MT17_79)back to top |