mRNA_D-mesarthrocarpus_Contig11260.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig11260.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig11260.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig11260.2.1 vs. uniprot
Match: A0A2D7FLN9_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7FLN9_9PROT)

HSP 1 Score: 195 bits (496), Expect = 4.320e-62
Identity = 93/115 (80.87%), Postives = 107/115 (93.04%), Query Frame = 1
Query:   79 MVTVVRLSDYKSANGRFKPDICFNKRELDQLLTVYSRRVMSGEWKDYAIRHDPTMAAFLIYRNNSRQPAFTVVKHHSNNGKTEFVVFHGRERLKRSDSLKEAVTVLSRKLKLVKK 423
            MV VV LSDYKSA+  FKPDICFNK+ELDQLLTVYSRRV SGEWKDYAIRHDP +AAFLIYRNNS+QPAFT++KHH+N GKTEFVV+HGRERLKRSD+LK+ +TVL+RKLKLV++
Sbjct:   14 MVKVVSLSDYKSADRHFKPDICFNKQELDQLLTVYSRRVTSGEWKDYAIRHDPAIAAFLIYRNNSQQPAFTIIKHHTNGGKTEFVVYHGRERLKRSDALKDTLTVLNRKLKLVRR 128          
BLAST of mRNA_D-mesarthrocarpus_Contig11260.2.1 vs. uniprot
Match: A0A2D8PUG0_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PUG0_9PROT)

HSP 1 Score: 179 bits (453), Expect = 1.740e-55
Identity = 87/131 (66.41%), Postives = 110/131 (83.97%), Query Frame = 1
Query:   25 IGIIDVTNSSNTGIWPAPMVTVVRLSDYKSANGRFKPDICFNKRELDQLLTVYSRRVMSGEWKDYAIRHDPTMAAFLIYRNNSRQPAFTVVKHHSNNGKTEFVVFHGRERLKRSDSLKEAVTVLSRKLKLV 417
            +GIID  N + TG+ P+ M TVV L+DYK A+ R +PDICFNK+E D LL+VYSRRVMSGEWKDYAIRHDP+MAAFLIYRNNSRQP+FTVVK  ++  ++EF+V+HGR+RLKR+ SL +A++VL RK KL+
Sbjct:    1 MGIIDCRNFA-TGVPPSQMSTVVSLADYKKASRRIRPDICFNKKEFDLLLSVYSRRVMSGEWKDYAIRHDPSMAAFLIYRNNSRQPSFTVVKRQTSGSRSEFLVYHGRQRLKRTASLSDALSVLKRKFKLI 130          
BLAST of mRNA_D-mesarthrocarpus_Contig11260.2.1 vs. uniprot
Match: A0A3D2BP58_9PROT (Uncharacterized protein n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3D2BP58_9PROT)

HSP 1 Score: 177 bits (450), Expect = 3.390e-55
Identity = 84/118 (71.19%), Postives = 105/118 (88.98%), Query Frame = 1
Query:   70 PAPMVTVVRLSDYKSANGRFKPDICFNKRELDQLLTVYSRRVMSGEWKDYAIRHDPTMAAFLIYRNNSRQPAFTVVKHHSNNGKTEFVVFHGRERLKRSDSLKEAVTVLSRKLKLVKK 423
            P  M TVVRL+DYK+AN R +PDICF+K+E DQLL+VYSRRVMSG+WKDYAIRH+PTMAAFLIYRNNSRQP+FT+VK  +++ K E++V+HGRER+KRS SL +A++VL+RKLKLV K
Sbjct:    3 PTRMSTVVRLADYKNANRRIQPDICFDKKEFDQLLSVYSRRVMSGDWKDYAIRHEPTMAAFLIYRNNSRQPSFTIVKQKASSSKLEYLVYHGRERMKRSSSLTDALSVLTRKLKLVSK 120          
BLAST of mRNA_D-mesarthrocarpus_Contig11260.2.1 vs. uniprot
Match: A0A2S6Q7M5_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6Q7M5_9PROT)

HSP 1 Score: 164 bits (415), Expect = 6.170e-50
Identity = 81/115 (70.43%), Postives = 98/115 (85.22%), Query Frame = 1
Query:   79 MVTVVRLSDYKSANGRFKPDICFNKRELDQLLTVYSRRVMSGEWKDYAIRHDPTMAAFLIYRNNSRQPAFTVVKHHSNNGKTEFVVFHGRERLKRSDSLKEAVTVLSRKLKLVKK 423
            M TVVRL+DYK+A  R + DICF+K+E DQLL+VYSRRVMSG+WKDYAIRHDPTMAAF+IYRNNSRQP+FTVVK  ++  K E++V+HGRERLKRS SL  A++VL  K+KLV K
Sbjct:    1 MSTVVRLADYKNATRRTQTDICFDKKEFDQLLSVYSRRVMSGDWKDYAIRHDPTMAAFMIYRNNSRQPSFTVVKRKASGSKLEYLVYHGRERLKRSLSLANALSVLKPKIKLVGK 115          
BLAST of mRNA_D-mesarthrocarpus_Contig11260.2.1 vs. uniprot
Match: A0A2E6GL72_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GL72_9PROT)

HSP 1 Score: 90.5 bits (223), Expect = 8.190e-21
Identity = 52/114 (45.61%), Postives = 69/114 (60.53%), Query Frame = 1
Query:   79 MVTVVRLSDYKSANGRFKPDICFNKRELDQLLTVYSRRVMSGEWKDYAIRHDPTMAAFLIYRNNSRQPAFTVVKHHSNNGKT-EFVVFHGRERLKRSDSLKEAVTVLSRKLKLV 417
            M  VVRL D+K  +      + F K EL+QLL+ YSRRV+SGEWKDYAI H   M+AF IYR+    P FT+ K+     +  ++VV  G   LKR   L + ++V  R+LKLV
Sbjct:    2 MPKVVRLKDFKRKDSSA---VYFTKNELNQLLSHYSRRVISGEWKDYAIDHGKGMSAFSIYRDTGTHPVFTIFKYAKGTHRNGDYVVGAGGNMLKRGKKLTDVLSVFDRQLKLV 112          
BLAST of mRNA_D-mesarthrocarpus_Contig11260.2.1 vs. uniprot
Match: A0A7C2IKS2_9PROT (DUF2794 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7C2IKS2_9PROT)

HSP 1 Score: 90.1 bits (222), Expect = 1.040e-20
Identity = 49/114 (42.98%), Postives = 76/114 (66.67%), Query Frame = 1
Query:   79 MVTVVRLSDYKSANGRFKPDICFNKRELDQLLTVYSRRVMSGEWKDYAIRHDPTMAAFLIYRNNSRQPAFTVVKHHSNNGKTEFVVFHGRERLKRSDSLKEAVTVLSRKLKLVK 420
            M  ++RL+D++   G+    + FN++EL +LL +YSRRV SGEWKDYAI     MA F I+R++  +P F +VK  +  G  E+VVF  R +LK   ++ EA++VL R+L+L++
Sbjct:    1 MSEMLRLADFR---GKRAQHVFFNRQELRKLLDLYSRRVASGEWKDYAIDQYGPMAVFSIFRHSFDRPLFAIVKRAAARG-CEYVVFSDRRKLKHGRTIDEALSVLERRLRLIR 110          
BLAST of mRNA_D-mesarthrocarpus_Contig11260.2.1 vs. uniprot
Match: A0A6A7KPQ0_9PROT (DUF2794 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6A7KPQ0_9PROT)

HSP 1 Score: 89.0 bits (219), Expect = 3.200e-20
Identity = 46/113 (40.71%), Postives = 72/113 (63.72%), Query Frame = 1
Query:   79 MVTVVRLSDYKSANGRFKPDICFNKRELDQLLTVYSRRVMSGEWKDYAIRHDPTMAAFLIYRNNSRQPAFTVVKHHSNNGKTEFVVFHGRERLKRSDSLKEAVTVLSRKLKLV 417
            M  +VRLS+++   G+    + F+++EL QLL VYSRRV SGEWKDYAI     +A F I+R+    P FTV K   N    ++++F GRE++K   ++ E +++ +R L+L+
Sbjct:    1 MADLVRLSEHRRNKGK---RVTFDRQELRQLLDVYSRRVASGEWKDYAIDLRHGVAVFSIFRHTFDLPVFTVAKRTGNGRHCDYLLFSGREQIKHGQTIGEVLSIFNRPLRLI 110          
BLAST of mRNA_D-mesarthrocarpus_Contig11260.2.1 vs. uniprot
Match: UPI0015D4DBB1 (DUF2794 domain-containing protein n=1 Tax=Azospirillum oleiclasticum TaxID=2735135 RepID=UPI0015D4DBB1)

HSP 1 Score: 88.2 bits (217), Expect = 6.940e-20
Identity = 47/111 (42.34%), Postives = 73/111 (65.77%), Query Frame = 1
Query:   88 VVRLSDYKSANGRFKPDICFNKRELDQLLTVYSRRVMSGEWKDYAIRHDPTMAAFLIYRNNSRQPAFTVVKHH-SNNGKTEFVVFHGRERLKRSDSLKEAVTVLSRKLKLV 417
            ++ LS+ + A+ R    I F++ EL QLL +YS RV +GEW+DYAI H   MA F I+R+   +P F +VK H +  G  E+ VF GR++L R+ +L++A+TV  R +++V
Sbjct:    9 LIPLSERRKASRR----IYFDRVELSQLLQLYSSRVATGEWRDYAIDHGVGMAVFSIFRHTLERPLFAIVKTHGTGKGGAEYTVFTGRQKLARATTLRDALTVFDRPIRVV 115          
BLAST of mRNA_D-mesarthrocarpus_Contig11260.2.1 vs. uniprot
Match: A0A5J6N2H3_9PROT (Uncharacterized protein n=1 Tax=Hypericibacter adhaerens TaxID=2602016 RepID=A0A5J6N2H3_9PROT)

HSP 1 Score: 87.8 bits (216), Expect = 9.560e-20
Identity = 47/118 (39.83%), Postives = 77/118 (65.25%), Query Frame = 1
Query:   79 MVTVVRLSDYKSANGRFKPDICFNKRELDQLLTVYSRRVMSGEWKDYAIRHDPTMAAFLIYRNNSRQPAFTVVKHHSNNG-----KTEFVVFHGRERLKRSDSLKEAVTVLSRKLKLV 417
            M +++RL++Y+    R    + F++REL+QLL++YSRRVM GEW+DYAI H P MA F ++R++  +P F++ K  S  G     + EF++ +GR RL R+  L++ +  L   L++V
Sbjct:    1 MSSLIRLAEYR----RQHRVVFFSRRELNQLLSLYSRRVMRGEWRDYAIDHRPGMAMFSVFRSSRERPLFSIAKRVSLTGPASEREAEFLLLNGRHRLGRASLLEDIIEQLESGLRVV 114          
BLAST of mRNA_D-mesarthrocarpus_Contig11260.2.1 vs. uniprot
Match: A0A2E7QV02_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7QV02_9PROT)

HSP 1 Score: 86.7 bits (213), Expect = 2.640e-19
Identity = 48/111 (43.24%), Postives = 67/111 (60.36%), Query Frame = 1
Query:   88 VVRLSDYKSANGRFKPDICFNKRELDQLLTVYSRRVMSGEWKDYAIRHDPTMAAFLIYRNNSRQPAFTVVKHHSNNGKT-EFVVFHGRERLKRSDSLKEAVTVLSRKLKLV 417
            V+ L ++K  N      + F K EL+QLL+ YSRRV+SGEWKDYAI H   M+AF IYR     P FT+ K+     +  ++VV    + LKR  +L E +++  R+LKLV
Sbjct:    5 VILLDEFKRKNSS---TVYFTKNELNQLLSQYSRRVISGEWKDYAIDHGKGMSAFSIYRETGTHPVFTISKYAKGTHRNGDYVVGAAGKMLKRGKNLSEVLSIFKRQLKLV 112          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig11260.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D7FLN9_9PROT4.320e-6280.87Uncharacterized protein n=1 Tax=Rhodospirillaceae ... [more]
A0A2D8PUG0_9PROT1.740e-5566.41Uncharacterized protein n=1 Tax=Rhodospirillaceae ... [more]
A0A3D2BP58_9PROT3.390e-5571.19Uncharacterized protein n=2 Tax=Rhodospirillaceae ... [more]
A0A2S6Q7M5_9PROT6.170e-5070.43Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A2E6GL72_9PROT8.190e-2145.61Uncharacterized protein n=1 Tax=Rhodospirillaceae ... [more]
A0A7C2IKS2_9PROT1.040e-2042.98DUF2794 domain-containing protein n=1 Tax=Alphapro... [more]
A0A6A7KPQ0_9PROT3.200e-2040.71DUF2794 domain-containing protein n=1 Tax=Alphapro... [more]
UPI0015D4DBB16.940e-2042.34DUF2794 domain-containing protein n=1 Tax=Azospiri... [more]
A0A5J6N2H3_9PROT9.560e-2039.83Uncharacterized protein n=1 Tax=Hypericibacter adh... [more]
A0A2E7QV02_9PROT2.640e-1943.24Uncharacterized protein n=1 Tax=Rhodospirillaceae ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig11260contigD-mesarthrocarpus_Contig11260:1044..1469 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1380394.JADL01000014_gene134
PFAMsDUF2794
Model size426
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.54e-18
EggNOG OGs2CCMQ@1|root,32RW3@2|Bacteria,1MZHB@1224|Proteobacteria,2UCC9@28211|Alphaproteobacteria,2JU22@204441|Rhodospirillales
DescriptionProtein of unknown function (DUF2794)
Cds size426
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789248.9869213-CDS-D-mesarthrocarpus_Contig11260:1043..14691680789248.9869213-CDS-D-mesarthrocarpus_Contig11260:1043..1469Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig11260 1044..1469 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig11260.2.1prot_D-mesarthrocarpus_Contig11260.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig11260 1044..1469 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig11260.2.1

>prot_D-mesarthrocarpus_Contig11260.2.1 ID=prot_D-mesarthrocarpus_Contig11260.2.1|Name=mRNA_D-mesarthrocarpus_Contig11260.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=142bp
MRLDELREIGIIDVTNSSNTGIWPAPMVTVVRLSDYKSANGRFKPDICFN
KRELDQLLTVYSRRVMSGEWKDYAIRHDPTMAAFLIYRNNSRQPAFTVVK
HHSNNGKTEFVVFHGRERLKRSDSLKEAVTVLSRKLKLVKK*
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mRNA from alignment at D-mesarthrocarpus_Contig11260:1044..1469+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig11260.2.1 ID=mRNA_D-mesarthrocarpus_Contig11260.2.1|Name=mRNA_D-mesarthrocarpus_Contig11260.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=426bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11260:1044..1469+ (Discosporangium mesarthrocarpum MT17_79)
ATGCGACTGGACGAACTGCGCGAAATAGGGATAATTGATGTCACGAATTC GTCAAATACAGGGATTTGGCCCGCGCCGATGGTCACTGTCGTTCGCCTTT CGGACTATAAAAGCGCCAACGGGCGTTTTAAGCCGGATATCTGCTTCAAT AAACGGGAACTCGACCAGCTTCTGACGGTGTATAGCCGCCGGGTGATGAG CGGCGAATGGAAAGATTATGCGATCCGTCACGACCCGACGATGGCCGCTT TCCTGATCTACCGAAACAACAGTCGCCAGCCCGCATTTACGGTGGTTAAA CACCACAGCAATAACGGAAAGACGGAGTTTGTGGTCTTTCACGGGCGGGA GCGGCTGAAACGCAGCGATTCACTCAAAGAAGCGGTTACGGTGCTCAGCC GCAAGCTAAAACTCGTCAAGAAATAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig11260:1044..1469+

>mRNA_D-mesarthrocarpus_Contig11260.2.1 ID=mRNA_D-mesarthrocarpus_Contig11260.2.1|Name=mRNA_D-mesarthrocarpus_Contig11260.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=426bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11260:1044..1469+ (Discosporangium mesarthrocarpum MT17_79)
ATGCGACTGGACGAACTGCGCGAAATAGGGATAATTGATGTCACGAATTC
GTCAAATACAGGGATTTGGCCCGCGCCGATGGTCACTGTCGTTCGCCTTT
CGGACTATAAAAGCGCCAACGGGCGTTTTAAGCCGGATATCTGCTTCAAT
AAACGGGAACTCGACCAGCTTCTGACGGTGTATAGCCGCCGGGTGATGAG
CGGCGAATGGAAAGATTATGCGATCCGTCACGACCCGACGATGGCCGCTT
TCCTGATCTACCGAAACAACAGTCGCCAGCCCGCATTTACGGTGGTTAAA
CACCACAGCAATAACGGAAAGACGGAGTTTGTGGTCTTTCACGGGCGGGA
GCGGCTGAAACGCAGCGATTCACTCAAAGAAGCGGTTACGGTGCTCAGCC
GCAAGCTAAAACTCGTCAAGAAATAG
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