mRNA_D-mesarthrocarpus_Contig11252.1.2 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig11252.1.2
Unique NamemRNA_D-mesarthrocarpus_Contig11252.1.2
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig11252.1.2 vs. uniprot
Match: D8LJQ2_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ2_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 2.670e-31
Identity = 55/87 (63.22%), Postives = 70/87 (80.46%), Query Frame = 1
Query:   28 QAAKGTLREEARPLVFTRGRANISKLRRKLIEGGPEIWSEEEHNRSNVHMKRPAHDQWGISKIVFVFCDDFMKKVFTFPWFNDPTWR 288
            Q AK  L  EARPLVFTRGRA++S L+  L   G  IW++EEH+R+NV M RPAHD+WGISKIV VFCDDF+K+V+TFPW+++P W+
Sbjct:   37 QVAKEQLDPEARPLVFTRGRADLSLLKLLLSSRGASIWTDEEHDRTNVKMTRPAHDKWGISKIVLVFCDDFLKRVYTFPWYHEPEWK 123          
BLAST of mRNA_D-mesarthrocarpus_Contig11252.1.2 vs. uniprot
Match: A0A6G6CDK9_SACJA (Sulfotransferase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A6G6CDK9_SACJA)

HSP 1 Score: 120 bits (301), Expect = 1.820e-30
Identity = 53/87 (60.92%), Postives = 67/87 (77.01%), Query Frame = 1
Query:   28 QAAKGTLREEARPLVFTRGRANISKLRRKLIEGGPEIWSEEEHNRSNVHMKRPAHDQWGISKIVFVFCDDFMKKVFTFPWFNDPTWR 288
            Q A+  L  EARP+VFTRGR ++S L+  L   G  +W++EEH RSNV + RPAHD+WGI KIVFV+ DDF+KKV+TFPWF+DP WR
Sbjct:   36 QVAEDRLDPEARPMVFTRGRVDVSLLQHLLSSKGDAVWTDEEHARSNVKLTRPAHDRWGIGKIVFVYSDDFLKKVYTFPWFHDPEWR 122          
BLAST of mRNA_D-mesarthrocarpus_Contig11252.1.2 vs. uniprot
Match: W7U713_9STRA (Sulfotransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U713_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.400e-21
Identity = 41/84 (48.81%), Postives = 60/84 (71.43%), Query Frame = 1
Query:   46 LREEAR---PLVFTRGRANISKLRRKLIEGGPEIWSEEEHNRSNVHMKRPAHDQWGISKIVFVFCDDFMKKVFTFPWFNDPTWR 288
            L EEAR   PL   RG+  ++ ++RKL +GG ++W EE   ++NV + RP+HD WGI KIVF++CDDF+++ F  PWF+DP W+
Sbjct:   88 LPEEARVRVPLCSARGKVCVAGIKRKLSDGGAKLWQEENAEKTNVGILRPSHDAWGIKKIVFIYCDDFLRRCFEMPWFHDPEWQ 171          
BLAST of mRNA_D-mesarthrocarpus_Contig11252.1.2 vs. uniprot
Match: A0A4D9D757_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D757_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.510e-21
Identity = 41/84 (48.81%), Postives = 60/84 (71.43%), Query Frame = 1
Query:   46 LREEAR---PLVFTRGRANISKLRRKLIEGGPEIWSEEEHNRSNVHMKRPAHDQWGISKIVFVFCDDFMKKVFTFPWFNDPTWR 288
            L EEAR   PL   RG+  ++ ++RKL +GG ++W EE   ++NV + RP+HD WGI KIVF++CDDF+++ F  PWF+DP W+
Sbjct:  419 LPEEARVRVPLCSARGKVCVAGIKRKLSDGGAKLWQEENAEKTNVGILRPSHDAWGIKKIVFIYCDDFLRRCFEMPWFHDPEWQ 502          
BLAST of mRNA_D-mesarthrocarpus_Contig11252.1.2 vs. uniprot
Match: A0A835YZ41_9STRA (Sulfotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ41_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 3.490e-21
Identity = 43/87 (49.43%), Postives = 56/87 (64.37%), Query Frame = 1
Query:   28 QAAKGTLREEARPLVFTRGRANISKLRRKLIEGGPEIWSEEEHNRSNVHMKRPAHDQWGISKIVFVFCDDFMKKVFTFPWFNDPTWR 288
            Q+A+GTLR  A P VF+RG A  + L   L + G   W E  H R NV + RPAHD+WG+ K V V+CDDF+K V+ FPW+ +  WR
Sbjct:   47 QSARGTLRAAAAPYVFSRGAAGAAPLAALLSKLGDAAWDEAAHARDNVRITRPAHDRWGVRKAVLVYCDDFLKGVYGFPWWREERWR 133          
BLAST of mRNA_D-mesarthrocarpus_Contig11252.1.2 vs. uniprot
Match: A0A7S3HEI2_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HEI2_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 2.960e-17
Identity = 39/72 (54.17%), Postives = 47/72 (65.28%), Query Frame = 1
Query:   73 FTRGRANISKLRRKLIEGGPEIWSEEEHNRSNVHMKRPAHDQWGISKIVFVFCDDFMKKVFTFPWFNDPTWR 288
            FTRG  +I   + KL+   PE+W E+E+   NV + RPAHD WGI KIVF FCDDF+ KV  FPW   P WR
Sbjct:   54 FTRGTLDIGPFKEKLLSLPPEMW-EDENQMGNVRITRPAHDAWGIKKIVFNFCDDFLLKVLDFPWSQLPEWR 124          
BLAST of mRNA_D-mesarthrocarpus_Contig11252.1.2 vs. uniprot
Match: A0A2D4C4L0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4L0_PYTIN)

HSP 1 Score: 83.6 bits (205), Expect = 1.030e-16
Identity = 34/66 (51.52%), Postives = 51/66 (77.27%), Query Frame = 1
Query:   91 NISKLRRKLIEGGPEIWSEEEHNRSNVHMKRPAHDQWGISKIVFVFCDDFMKKVFTFPWFNDPTWR 288
            +IS L+R+++EGG ++W +  H R NV ++R  HD+WGI K+VF+FCDDF+ +V+TFPWF+   WR
Sbjct:   43 DISGLQRRILEGGEQLW-DPAHQRDNVPIQRAGHDKWGIGKVVFIFCDDFISRVYTFPWFDK--WR 105          
BLAST of mRNA_D-mesarthrocarpus_Contig11252.1.2 vs. uniprot
Match: A0A7S3XTL4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTL4_HETAK)

HSP 1 Score: 82.0 bits (201), Expect = 3.510e-16
Identity = 32/58 (55.17%), Postives = 42/58 (72.41%), Query Frame = 1
Query:  115 LIEGGPEIWSEEEHNRSNVHMKRPAHDQWGISKIVFVFCDDFMKKVFTFPWFNDPTWR 288
            L+  G EIW ++   R NV + RPAHD WGI K+VFVFCDD++K+V+  PWF+ P WR
Sbjct:    3 LLAQGEEIWDDDYQARHNVGLTRPAHDNWGIRKVVFVFCDDYLKRVYELPWFHRPEWR 60          
BLAST of mRNA_D-mesarthrocarpus_Contig11252.1.2 vs. uniprot
Match: A0A7S4A6J3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6J3_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 5.000e-16
Identity = 33/72 (45.83%), Postives = 49/72 (68.06%), Query Frame = 1
Query:   73 FTRGRANISKLRRKLIEGGPEIWSEEEHNRSNVHMKRPAHDQWGISKIVFVFCDDFMKKVFTFPWFNDPTWR 288
            F RGR+++S+L+ +L      +WS+E     NV + RP+HD WGI K+ FVFCDDF+ +V+  P + DP+WR
Sbjct:   69 FLRGRSDVSRLKARLERDDDFVWSDEYATEHNVTLARPSHDGWGIRKLAFVFCDDFLHRVYRLPLWEDPSWR 140          
BLAST of mRNA_D-mesarthrocarpus_Contig11252.1.2 vs. uniprot
Match: A0A8K1CJ00_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJ00_PYTOL)

HSP 1 Score: 80.1 bits (196), Expect = 1.720e-15
Identity = 32/71 (45.07%), Postives = 54/71 (76.06%), Query Frame = 1
Query:   64 PLVFTRGR-ANISKLRRKLIEGGPEIWSEEEHNRSNVHMKRPAHDQWGISKIVFVFCDDFMKKVFTFPWFN 273
            P+V  R +  +IS L+++++EGG ++W +  H + NV ++R  HD+WGI K+VF+FCDD++ KV+TFPW++
Sbjct:   46 PIVIERQQHIDISGLQKRILEGGEQLW-DPAHQKDNVPIQRAGHDKWGIGKVVFIFCDDYISKVYTFPWYH 115          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig11252.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJQ2_ECTSI2.670e-3163.22Sulfotransferase n=1 Tax=Ectocarpus siliculosus Ta... [more]
A0A6G6CDK9_SACJA1.820e-3060.92Sulfotransferase n=1 Tax=Saccharina japonica TaxID... [more]
W7U713_9STRA1.400e-2148.81Sulfotransferase n=1 Tax=Nannochloropsis gaditana ... [more]
A0A4D9D757_9STRA1.510e-2148.81Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A835YZ41_9STRA3.490e-2149.43Sulfotransferase n=1 Tax=Tribonema minus TaxID=303... [more]
A0A7S3HEI2_9STRA2.960e-1754.17Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
A0A2D4C4L0_PYTIN1.030e-1651.52Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A7S3XTL4_HETAK3.510e-1655.17Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4A6J3_9STRA5.000e-1645.83Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8K1CJ00_PYTOL1.720e-1545.07Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig11252contigD-mesarthrocarpus_Contig11252:427..1206 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LJQ2
PFAMsAsp_Arg_Hydrox,Sulfotransfer_1,Sulfotransfer_3
Model size288
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue4.38e-32
EggNOG OGs2CN6N@1|root,2QU6N@2759|Eukaryota
DescriptionN-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity
Cds size288
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789248.4101934-CDS-D-mesarthrocarpus_Contig11252:426..5641680789248.4101934-CDS-D-mesarthrocarpus_Contig11252:426..564Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig11252 427..564 -
1680789248.4241943-CDS-D-mesarthrocarpus_Contig11252:1056..12061680789248.4241943-CDS-D-mesarthrocarpus_Contig11252:1056..1206Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig11252 1057..1206 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig11252.1.2prot_D-mesarthrocarpus_Contig11252.1.2Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig11252 427..1206 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig11252.1.2

>prot_D-mesarthrocarpus_Contig11252.1.2 ID=prot_D-mesarthrocarpus_Contig11252.1.2|Name=mRNA_D-mesarthrocarpus_Contig11252.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=96bp
PSHFRVLPSQAAKGTLREEARPLVFTRGRANISKLRRKLIEGGPEIWSEE
EHNRSNVHMKRPAHDQWGISKIVFVFCDDFMKKVFTFPWFNDPTWR
back to top

mRNA from alignment at D-mesarthrocarpus_Contig11252:427..1206-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig11252.1.2 ID=mRNA_D-mesarthrocarpus_Contig11252.1.2|Name=mRNA_D-mesarthrocarpus_Contig11252.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=780bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11252:427..1206- (Discosporangium mesarthrocarpum MT17_79)
CCTTCTCATTTCCGCGTCTTGCCCTCTCAGGCAGCCAAAGGCACCCTCAG GGAAGAGGCGCGCCCACTTGTGTTCACGCGAGGCAGGGCCAACATCTCTA AGCTACGAAGGAAGCTCATTGAAGGCGGGCCCGAAATATGGTCGGAAGAG GTGGGGTAAAGCGACTTTCCCCCTCTACGTTCTTGGTTCATATAGACGCT GTCGAAGCACGAGGGGGGGGTGCAACACGTTTCTTCGTACAAGCAAGCAG GCTTGACACTCAACATCTCTTTGCATCCGTAGCCACAACACAACGCAAGG AAGTTCACCTTGCGAACGGTGCAGTCTAGTCTCTATGCGGCCTCTGCTGT AGTTGGGATGCCCAACTGAGATGACGTCAGTCGGTGCAATGCATGACACT TCGGAATCTTGACCCTTTTAGTTGAACGTCGTTAGGGACTCTCTGCCCAA TCCTCACTCACTGACCTACGCCCTCGAAGTCTAACCCTACCCTCAACCCT AAACATTACCCTGACCTTAATCTCTGCCTGCGTTCCTATCGATCTCAAAC CCCAGATCCGCCACCCCCTTTCCCCCCACGTCATCAAGTCCTGCCCCTCC TCCACCCCCCGCCCCTTCCCTTGTCTTATGCTGAGAGGGCAGGAGCACAA CAGGTCCAATGTGCACATGAAGCGTCCAGCGCACGACCAGTGGGGCATAT CGAAGATCGTTTTTGTCTTCTGTGACGACTTCATGAAGAAGGTCTTCACA TTTCCCTGGTTCAACGACCCCACCTGGAGG
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig11252:427..1206-

>mRNA_D-mesarthrocarpus_Contig11252.1.2 ID=mRNA_D-mesarthrocarpus_Contig11252.1.2|Name=mRNA_D-mesarthrocarpus_Contig11252.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=288bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11252:427..1206- (Discosporangium mesarthrocarpum MT17_79)
CCTTCTCATTTCCGCGTCTTGCCCTCTCAGGCAGCCAAAGGCACCCTCAG
GGAAGAGGCGCGCCCACTTGTGTTCACGCGAGGCAGGGCCAACATCTCTA
AGCTACGAAGGAAGCTCATTGAAGGCGGGCCCGAAATATGGTCGGAAGAG
GAGCACAACAGGTCCAATGTGCACATGAAGCGTCCAGCGCACGACCAGTG
GGGCATATCGAAGATCGTTTTTGTCTTCTGTGACGACTTCATGAAGAAGG
TCTTCACATTTCCCTGGTTCAACGACCCCACCTGGAGG
back to top