mRNA_D-mesarthrocarpus_Contig11248.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig11248.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig11248.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig11248.1.1 vs. uniprot
Match: A0A835ZG36_9STRA (Phosphoserine phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG36_9STRA)

HSP 1 Score: 129 bits (325), Expect = 2.990e-35
Identity = 60/76 (78.95%), Postives = 70/76 (92.11%), Query Frame = 1
Query:   16 QAVCFDVDSTVCTEEGIDILAEFCGAAEAVADLTNKAMGGSMLFQDALQARLDLMKPSRVLVEQCLAEHPPQLSPG 243
            QAVCFDVDSTVCTEEGID+LA FCGAAEAVA++T KAMGG+MLFQDA++ RL+LM+PS  +VE+CL EHPPQLSPG
Sbjct:   53 QAVCFDVDSTVCTEEGIDVLAGFCGAAEAVAEMTKKAMGGNMLFQDAIRMRLELMRPSTAIVERCLREHPPQLSPG 128          
BLAST of mRNA_D-mesarthrocarpus_Contig11248.1.1 vs. uniprot
Match: D7FPS7_ECTSI (Phosphoserine phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPS7_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 8.630e-33
Identity = 60/76 (78.95%), Postives = 69/76 (90.79%), Query Frame = 1
Query:   16 QAVCFDVDSTVCTEEGIDILAEFCGAAEAVADLTNKAMGGSMLFQDALQARLDLMKPSRVLVEQCLAEHPPQLSPG 243
            QAVCFDVDSTV  EEGID+LA+FCGAAEAVADLT++AMGGSM FQDAL+ARLDLM PS+ +V+ CL EHPP+LSPG
Sbjct:   73 QAVCFDVDSTVIAEEGIDVLADFCGAAEAVADLTSRAMGGSMPFQDALKARLDLMTPSQKVVDLCLREHPPRLSPG 148          
BLAST of mRNA_D-mesarthrocarpus_Contig11248.1.1 vs. uniprot
Match: A0A7S2D0K5_9STRA (Phosphoserine phosphatase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D0K5_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.680e-30
Identity = 57/76 (75.00%), Postives = 65/76 (85.53%), Query Frame = 1
Query:   16 QAVCFDVDSTVCTEEGIDILAEFCGAAEAVADLTNKAMGGSMLFQDALQARLDLMKPSRVLVEQCLAEHPPQLSPG 243
            QAVCFDVDSTV TEEGID+LA  CGA EAVA+LT KAMGG+MLFQDAL ARLDL++PS   +  CLA+HPPQL+PG
Sbjct:   40 QAVCFDVDSTVITEEGIDVLAAHCGAGEAVAELTAKAMGGTMLFQDALAARLDLIRPSMNDITDCLADHPPQLTPG 115          
BLAST of mRNA_D-mesarthrocarpus_Contig11248.1.1 vs. uniprot
Match: W7U7M1_9STRA (Phosphoserine phosphatase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U7M1_9STRA)

HSP 1 Score: 114 bits (284), Expect = 8.730e-29
Identity = 54/80 (67.50%), Postives = 63/80 (78.75%), Query Frame = 1
Query:   16 QAVCFDVDSTVCTEEGIDILAEFCGAAEAVADLTNKAMGGSMLFQDALQARLDLMKPSRVLVEQCLAEHPPQLSPGERGF 255
            Q +CFDVDSTVC EEGID+LA F G  +AVADLT KAMGGS+LFQDAL+ RLDL+KPSR  ++ CL  HP  LSPG + F
Sbjct:   76 QVICFDVDSTVCAEEGIDVLAAFLGQGQAVADLTAKAMGGSVLFQDALKGRLDLIKPSRADIQNCLLRHPATLSPGVKEF 155          
BLAST of mRNA_D-mesarthrocarpus_Contig11248.1.1 vs. uniprot
Match: A0A7S2V4I9_9STRA (Phosphoserine phosphatase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4I9_9STRA)

HSP 1 Score: 109 bits (272), Expect = 3.760e-27
Identity = 53/80 (66.25%), Postives = 64/80 (80.00%), Query Frame = 1
Query:   16 QAVCFDVDSTVCTEEGIDILAEFCGAAEAVADLTNKAMGGSMLFQDALQARLDLMKPSRVLVEQCLAEHPPQLSPGERGF 255
             AVCFDVDSTV  EEGID+LAE+CGA E VA+LT++AMGGSM FQDAL ARLDL++PS+     CL + PP+LSPG + F
Sbjct:   69 DAVCFDVDSTVIQEEGIDVLAEYCGAGEKVAELTSRAMGGSMRFQDALAARLDLIRPSKADFLNCLEKQPPKLSPGIKEF 148          
BLAST of mRNA_D-mesarthrocarpus_Contig11248.1.1 vs. uniprot
Match: A0A4D9D007_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D007_9STRA)

HSP 1 Score: 112 bits (281), Expect = 4.750e-27
Identity = 55/80 (68.75%), Postives = 63/80 (78.75%), Query Frame = 1
Query:   16 QAVCFDVDSTVCTEEGIDILAEFCGAAEAVADLTNKAMGGSMLFQDALQARLDLMKPSRVLVEQCLAEHPPQLSPGERGF 255
            QAVCFDVDSTVC EEGID+LA F G  +AVADLT KAMGGS+LFQDAL+ RLDL+KPSR  ++ CL   P  LSPG + F
Sbjct:   54 QAVCFDVDSTVCAEEGIDVLAAFLGQGQAVADLTAKAMGGSVLFQDALKGRLDLIKPSRADIQNCLLRRPATLSPGVKEF 133          
BLAST of mRNA_D-mesarthrocarpus_Contig11248.1.1 vs. uniprot
Match: A0A421F173_9STRA (Phosphoserine phosphatase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421F173_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.210e-26
Identity = 50/81 (61.73%), Postives = 62/81 (76.54%), Query Frame = 1
Query:   19 AVCFDVDSTVCTEEGIDILAEFCGAAEAVADLTNKAMGGSMLFQDALQARLDLMKPSRVLVEQCLAEHPPQLSPGERGFCA 261
            AVCFDVDSTVCTEEGID+LAE CGA  AV + T KAM G + F+DAL ARLD++KPS+  ++ CL +HPPQ +PG +   A
Sbjct:   38 AVCFDVDSTVCTEEGIDVLAEHCGAGTAVKEWTTKAMNGGVKFEDALAARLDIIKPSKKDIQDCLKKHPPQFTPGVKKLMA 118          
BLAST of mRNA_D-mesarthrocarpus_Contig11248.1.1 vs. uniprot
Match: A0A7R9U705_9STRA (Phosphoserine phosphatase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U705_9STRA)

HSP 1 Score: 106 bits (265), Expect = 4.490e-26
Identity = 51/76 (67.11%), Postives = 64/76 (84.21%), Query Frame = 1
Query:   16 QAVCFDVDSTVCTEEGIDILAEFCGAAEAVADLTNKAMGGSMLFQDALQARLDLMKPSRVLVEQCLAEHPPQLSPG 243
             AVCFDVDSTV TEEGID+LA+F G  + V+ LT  AMGGSM F+DAL+ARLDL++PS++ +E+CLAEH PQL+PG
Sbjct:   83 DAVCFDVDSTVITEEGIDVLAKFLGKYDEVSALTRSAMGGSMQFRDALEARLDLIRPSKMDIEKCLAEHRPQLNPG 158          
BLAST of mRNA_D-mesarthrocarpus_Contig11248.1.1 vs. uniprot
Match: M4C4L9_HYAAE (Phosphoserine phosphatase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C4L9_HYAAE)

HSP 1 Score: 105 bits (261), Expect = 7.680e-26
Identity = 47/77 (61.04%), Postives = 62/77 (80.52%), Query Frame = 1
Query:   13 LQAVCFDVDSTVCTEEGIDILAEFCGAAEAVADLTNKAMGGSMLFQDALQARLDLMKPSRVLVEQCLAEHPPQLSPG 243
            + AVCFDVDST+C +EGID+LAE CGA +AV + T KAM G + F+DAL ARLD++KPSR  ++ CLA+HPP+ +PG
Sbjct:   21 VSAVCFDVDSTICEDEGIDVLAEHCGAGKAVQEWTIKAMNGDVKFEDALAARLDIIKPSRQDIQDCLAQHPPKFTPG 97          
BLAST of mRNA_D-mesarthrocarpus_Contig11248.1.1 vs. uniprot
Match: V9EMP5_PHYPR (Phosphoserine phosphatase n=16 Tax=Phytophthora TaxID=4783 RepID=V9EMP5_PHYPR)

HSP 1 Score: 104 bits (260), Expect = 1.360e-25
Identity = 47/75 (62.67%), Postives = 61/75 (81.33%), Query Frame = 1
Query:   19 AVCFDVDSTVCTEEGIDILAEFCGAAEAVADLTNKAMGGSMLFQDALQARLDLMKPSRVLVEQCLAEHPPQLSPG 243
            AVCFDVDSTVC +EGID+LAE CGA +AV + T KAM G++ F+DAL ARLD++KPSR  ++ CL +HPP+ +PG
Sbjct:   55 AVCFDVDSTVCEDEGIDVLAEHCGAGQAVKEWTTKAMNGNVKFEDALAARLDIIKPSRQDIQDCLKQHPPKFTPG 129          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig11248.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZG36_9STRA2.990e-3578.95Phosphoserine phosphatase n=1 Tax=Tribonema minus ... [more]
D7FPS7_ECTSI8.630e-3378.95Phosphoserine phosphatase n=1 Tax=Ectocarpus silic... [more]
A0A7S2D0K5_9STRA1.680e-3075.00Phosphoserine phosphatase n=1 Tax=Dictyocha specul... [more]
W7U7M1_9STRA8.730e-2967.50Phosphoserine phosphatase n=2 Tax=Nannochloropsis ... [more]
A0A7S2V4I9_9STRA3.760e-2766.25Phosphoserine phosphatase (Fragment) n=1 Tax=Fibro... [more]
A0A4D9D007_9STRA4.750e-2768.75Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A421F173_9STRA1.210e-2661.73Phosphoserine phosphatase n=3 Tax=Phytophthora ker... [more]
A0A7R9U705_9STRA4.490e-2667.11Phosphoserine phosphatase n=1 Tax=Pinguiococcus py... [more]
M4C4L9_HYAAE7.680e-2661.04Phosphoserine phosphatase n=1 Tax=Hyaloperonospora... [more]
V9EMP5_PHYPR1.360e-2562.67Phosphoserine phosphatase n=16 Tax=Phytophthora Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig11248contigD-mesarthrocarpus_Contig11248:2214..3275 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FPS7
Preferred namePSPH
PFAMsHAD,Hydrolase
Model size276
Max annot lvl2759|Eukaryota
KEGG rclassRC00006,RC00017,RC00036
KEGG koko:K00831,ko:K01079
KEGG ReactionR00582,R04173,R05085
KEGG Pathwayko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230
KEGG ModuleM00020,M00124
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000287,GO:0000902,GO:0000904,GO:0003674,GO:0003824,GO:0004647,GO:0005488,GO:0005509,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006793,GO:0006796,GO:0006807,GO:0006928,GO:0006935,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0007422,GO:0007610,GO:0007617,GO:0007618,GO:0007619,GO:0008049,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009605,GO:0009612,GO:0009628,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009987,GO:0009991,GO:0010033,GO:0014070,GO:0016043,GO:0016053,GO:0016311,GO:0016545,GO:0016787,GO:0016788,GO:0016791,GO:0019098,GO:0019752,GO:0019953,GO:0022008,GO:0022414,GO:0030030,GO:0030154,GO:0030182,GO:0030534,GO:0031175,GO:0031667,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032990,GO:0033574,GO:0033993,GO:0040011,GO:0042221,GO:0042330,GO:0042493,GO:0042578,GO:0042802,GO:0042803,GO:0042995,GO:0043005,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0045433,GO:0045471,GO:0046394,GO:0046677,GO:0046872,GO:0046983,GO:0048065,GO:0048149,GO:0048468,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050896,GO:0051704,GO:0060179,GO:0061564,GO:0071704,GO:0071840,GO:0097305,GO:0097458,GO:0097485,GO:0120025,GO:0120036,GO:0120039,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901654,GO:1901700
Exons2
Evalue1.42e-33
EggNOG OGsCOG0560@1|root,KOG1615@2759|Eukaryota
EC2.6.1.52,3.1.3.3
Descriptionphosphoserine phosphatase activity
Cds size276
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko01009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789247.7821257-CDS-D-mesarthrocarpus_Contig11248:2213..23671680789247.7821257-CDS-D-mesarthrocarpus_Contig11248:2213..2367Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig11248 2214..2367 -
1680789247.7941608-CDS-D-mesarthrocarpus_Contig11248:3153..32751680789247.7941608-CDS-D-mesarthrocarpus_Contig11248:3153..3275Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig11248 3154..3275 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig11248.1.1prot_D-mesarthrocarpus_Contig11248.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig11248 2214..3275 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig11248.1.1

>prot_D-mesarthrocarpus_Contig11248.1.1 ID=prot_D-mesarthrocarpus_Contig11248.1.1|Name=mRNA_D-mesarthrocarpus_Contig11248.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=92bp
MCVFLQAVCFDVDSTVCTEEGIDILAEFCGAAEAVADLTNKAMGGSMLFQ
DALQARLDLMKPSRVLVEQCLAEHPPQLSPGERGFCACGCA*
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mRNA from alignment at D-mesarthrocarpus_Contig11248:2214..3275-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig11248.1.1 ID=mRNA_D-mesarthrocarpus_Contig11248.1.1|Name=mRNA_D-mesarthrocarpus_Contig11248.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1062bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11248:2214..3275- (Discosporangium mesarthrocarpum MT17_79)
ATGTGTGTGTTTTTGCAGGCTGTGTGTTTCGATGTTGACAGTACGGTCTG CACTGAGGAAGGGATTGACATCTTGGCAGAGTTCTGCGGGGCAGCGGAGG CGGTGGCCGACCTGACTAACAAGTGAGTAGCCACAGAGAGAGAGGAGCCC TCACGGGGCTGCTCCAGGGCACGCACAGGGATGCTGCAGAGCACTCACAG GGCTGCTGTGGGGGGGAGGGTGGGGGACAGGTTGCCTGCCGGCAATGACA GAGCTCTTGCCACCACAGGCCACTTCAGACTGCATGTTAATAGATTATTG AGGGAAAGGAGGGCACAGTTTTTTTTTTCTGCTTTTGAAGTATGTGCCCT CCATATCTTGCTTGCCTGCCCATATCCTCAACCCTATAATCCTAATCCTG ATCCTGACCATTTAAAAAGTGCCCGCTGTATTTTTTACCCGCAGCCCTAC ACTGCTAACCCCAACCCCAACCCTAACCCTAACCCTAACCCTAACCCTAA CCCTGACACTGCTTCGATCACCGAGGATCGATGTACATTTAACCGATGCA GGCTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGCTCCTCCTCCTCC TCCCTCTTAGGGTTATGGTTACCCATACAACCCCTCAAGCGGTTGTGAAC ATACCCCCCCCCACACGTCCATAACCCTATCCCATACTCCTCTGCTCCAT TCGCCTGCCCACAGCGTTAGTTAGGGTCAGGGTCATGGCTACCATTACCC CCCCGCCCCGCCCCGCCCCGCCCCGCCCCGCCCCGCCCCGCCCCGCCCCG CCCCGCCCCACCACTGCTGCGACAGATGCTTGAAAAATAACCATAACCCT TCATCACCAACCTTAACCCTTACACCTCTGTTTCTTCCTTCCTTACACAC ATTTACAGGGCAATGGGGGGATCCATGCTGTTTCAGGACGCCCTGCAAGC AAGGCTGGACCTGATGAAGCCGTCCCGGGTGCTGGTGGAGCAGTGCCTGG CGGAGCACCCCCCCCAACTGTCCCCCGGTGAGAGGGGTTTTTGTGCCTGT GGGTGCGCGTAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig11248:2214..3275-

>mRNA_D-mesarthrocarpus_Contig11248.1.1 ID=mRNA_D-mesarthrocarpus_Contig11248.1.1|Name=mRNA_D-mesarthrocarpus_Contig11248.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=276bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11248:2214..3275- (Discosporangium mesarthrocarpum MT17_79)
ATGTGTGTGTTTTTGCAGGCTGTGTGTTTCGATGTTGACAGTACGGTCTG
CACTGAGGAAGGGATTGACATCTTGGCAGAGTTCTGCGGGGCAGCGGAGG
CGGTGGCCGACCTGACTAACAAGGCAATGGGGGGATCCATGCTGTTTCAG
GACGCCCTGCAAGCAAGGCTGGACCTGATGAAGCCGTCCCGGGTGCTGGT
GGAGCAGTGCCTGGCGGAGCACCCCCCCCAACTGTCCCCCGGTGAGAGGG
GTTTTTGTGCCTGTGGGTGCGCGTAG
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