mRNA_D-mesarthrocarpus_Contig11183.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig11183.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig11183.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig11183.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig11183contigD-mesarthrocarpus_Contig11183:73..1244 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size665
Hectar predicted targeting categoryother localisation
Exons2
Ec32 ortholog descriptionAP2/ERF domain protein
Ec32 orthologEc-01_004370.1
Cds size663
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789243.1733208-CDS-D-mesarthrocarpus_Contig11183:72..2401680789243.1733208-CDS-D-mesarthrocarpus_Contig11183:72..240Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig11183 73..240 +
1680789243.1845849-CDS-D-mesarthrocarpus_Contig11183:749..12441680789243.1845849-CDS-D-mesarthrocarpus_Contig11183:749..1244Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig11183 750..1244 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig11183.1.1prot_D-mesarthrocarpus_Contig11183.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig11183 73..1244 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig11183.1.1

>prot_D-mesarthrocarpus_Contig11183.1.1 ID=prot_D-mesarthrocarpus_Contig11183.1.1|Name=mRNA_D-mesarthrocarpus_Contig11183.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=221bp
GVEFRSPPAFSEYTSSEQGEPVLEEMAGGGGGEWGNAMGEGAMEGFQHRG
FNDVFPVVQHLAQMSSSEPIQVLSGHVPPPQTEGNSCLYVLCITRRKATP
KNDAHGGGESPSPSALSAKSRGMESAKTEDETSAAPGREGSSHGALGPGP
SVSDYQEETDSSARVSRFYVGETDALRQRLEQHRATHGDRSVAAPGPGAP
SRRGRGGGGIPDKVGVGCRTG
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mRNA from alignment at D-mesarthrocarpus_Contig11183:73..1244+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig11183.1.1 ID=mRNA_D-mesarthrocarpus_Contig11183.1.1|Name=mRNA_D-mesarthrocarpus_Contig11183.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1172bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11183:73..1244+ (Discosporangium mesarthrocarpum MT17_79)
GGTGTTGAGTTCAGAAGTCCGCCAGCGTTCTCCGAATACACCTCTAGTGA
ACAGGGAGAACCTGTGCTAGAGGAGATGGCGGGGGGTGGAGGGGGGGAAT
GGGGCAACGCGATGGGGGAAGGAGCGATGGAGGGTTTCCAGCACCGCGGG
TTCAACGATGTCTTTCCTGTGCGTGGTGACAAGGCTCGAGCGAGTGATGT
ATAGAGTTTCCCGTAGCTGACCACGTGATTCTTCTCGTTGGCGTGGCGCA
GGTTTTGGGTTCGGGTTTGGTGGCATTGGTAACGATACCAGACGATGTGA
CCAATCTTCCATGTGGGGATGGCTTCCATCTATCCTCCCGCTGGTTGCCG
TATGCCCAGAATGCGGAGCAAGTCCTTGAGTTGACTGTGCGCAGCTGGAC
ACTCCTTTCAGCCATGCTGAGAGAACCTTCACGCTTGGATTTTTTTTCTG
TGTTTTTTTACCGTAGCTCTTCACTCTTGCGGACATACCAAGCTTCCCCC
GCCCCGCGTCACTCTATCACAGGCACTTCATCACGCGAACAACCTACCGC
CTGAAAGCGTCCGTGGCCCCTTTCCTCTCCAACCCTATCACTGCTTCCTT
GCGCTAGCACTACCTCCACTACCTCGCCCTTCGAAGTGTACTAAATACAG
CACCCTCGTCTGTGAATTTACGATCAGGTTGTGCAGCATCTTGCCCAGAT
GTCTTCCTCGGAGCCCATCCAGGTCTTGTCAGGCCACGTGCCCCCACCCC
AAACGGAGGGTAACTCTTGCCTCTACGTGCTATGCATTACCCGTCGGAAG
GCCACCCCCAAGAACGACGCGCACGGTGGTGGGGAAAGCCCTTCCCCCTC
TGCGCTCAGTGCCAAAAGCCGGGGCATGGAAAGCGCCAAGACAGAGGATG
AAACGAGCGCTGCTCCTGGGCGAGAAGGGAGCTCTCATGGTGCCCTGGGG
CCAGGCCCAAGCGTCAGTGATTACCAAGAAGAGACGGACTCCAGCGCCAG
GGTGAGCCGGTTCTATGTCGGAGAGACGGACGCGCTGAGGCAAAGGCTGG
AGCAGCACCGTGCGACGCATGGGGATCGCTCCGTCGCTGCCCCCGGCCCC
GGGGCTCCTTCGCGCAGAGGGAGGGGGGGGGGAGGCATACCGGACAAGGT
CGGGGTGGGGTGTCGGACGGGT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig11183:73..1244+

>mRNA_D-mesarthrocarpus_Contig11183.1.1 ID=mRNA_D-mesarthrocarpus_Contig11183.1.1|Name=mRNA_D-mesarthrocarpus_Contig11183.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=663bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11183:73..1244+ (Discosporangium mesarthrocarpum MT17_79)
GGTGTTGAGTTCAGAAGTCCGCCAGCGTTCTCCGAATACACCTCTAGTGA
ACAGGGAGAACCTGTGCTAGAGGAGATGGCGGGGGGTGGAGGGGGGGAAT
GGGGCAACGCGATGGGGGAAGGAGCGATGGAGGGTTTCCAGCACCGCGGG
TTCAACGATGTCTTTCCTGTTGTGCAGCATCTTGCCCAGATGTCTTCCTC
GGAGCCCATCCAGGTCTTGTCAGGCCACGTGCCCCCACCCCAAACGGAGG
GTAACTCTTGCCTCTACGTGCTATGCATTACCCGTCGGAAGGCCACCCCC
AAGAACGACGCGCACGGTGGTGGGGAAAGCCCTTCCCCCTCTGCGCTCAG
TGCCAAAAGCCGGGGCATGGAAAGCGCCAAGACAGAGGATGAAACGAGCG
CTGCTCCTGGGCGAGAAGGGAGCTCTCATGGTGCCCTGGGGCCAGGCCCA
AGCGTCAGTGATTACCAAGAAGAGACGGACTCCAGCGCCAGGGTGAGCCG
GTTCTATGTCGGAGAGACGGACGCGCTGAGGCAAAGGCTGGAGCAGCACC
GTGCGACGCATGGGGATCGCTCCGTCGCTGCCCCCGGCCCCGGGGCTCCT
TCGCGCAGAGGGAGGGGGGGGGGAGGCATACCGGACAAGGTCGGGGTGGG
GTGTCGGACGGGT
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