mRNA_D-mesarthrocarpus_Contig11168.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig11168.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig11168.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig11168.1.1 vs. uniprot
Match: W4GWE0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GWE0_9STRA)

HSP 1 Score: 128 bits (322), Expect = 8.030e-32
Identity = 67/136 (49.26%), Postives = 89/136 (65.44%), Query Frame = 1
Query:  145 LSHMHGKGGTGVVVDDMYDRVHVDEMWFYVMKDGKGINLHPEEDAPKPQRPQNKLFITKVMFLAAVARPRTISDGV-WFDGKIGIWPIADTVSAMRSSKNRKKGTMMLKPVTVNAERYKKLMIDKGIPAIKARIPR 549
            + H+H         DDM + VHVDE WF+  K  K + L P E+ P  +  ++K +ITKVMFL+AVARPR + D V WFDGKIG W   + V A RSS+NR  GT++ KPV+V  + Y+K++ID  IPAIKA+ PR
Sbjct:   93 MKHLHALSSAQYAFDDMMNTVHVDEKWFFATKISKKMYLAPGEEPPH-RTCKSKRYITKVMFLSAVARPRWVDDEVGWFDGKIGTWHFTERVPAERSSRNRAAGTLVTKPVSVTQDIYRKMLIDNVIPAIKAKWPR 227          
BLAST of mRNA_D-mesarthrocarpus_Contig11168.1.1 vs. uniprot
Match: A0A485LTD1_9STRA (Aste57867_25464 protein n=4 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LTD1_9STRA)

HSP 1 Score: 125 bits (314), Expect = 3.040e-31
Identity = 79/191 (41.36%), Postives = 117/191 (61.26%), Query Frame = 1
Query:    1 RTSYRKWAVKSGIPLSSLWRRCKL-VEAGSTNG------GSSRYCRTSRSAIGGALSHMHGKGGTGVVVDDMYDRVHVDEMWFYVMKDGKGINLHPEEDAPKPQRPQNKLFITKVMFLAAVARPRTISD-GVWFDGKIGIWPIADTVSAMRSSKNRKKGTMMLKPVTVNAERYKKLMIDKGIPAIKARIPR 549
            RT+ R    +SGI + +L R  KL +    +N        +++YCR        ALS +     + +V++DM + VH+DE WFY+ K  +   L P E  P+ ++ ++K FITKVMFL+AVARPR I D G+W+DGKIG WP  ++V+A R+S NR  GT   KP+TV  + Y++ +IDK +PAI A+ P+
Sbjct:  103 RTTLRAITEQSGISMGTLHRCLKLGLFRAHSNAIRPILSDANKYCRMKH-----ALSFV----SSDMVMNDMLNYVHLDEKWFYLSKATRTFYLVPGEREPE-RKCKSKRFITKVMFLSAVARPRYIHDTGLWWDGKIGTWPFVESVTAQRASVNRPAGTYETKPITVTKDVYREFIIDKVLPAIAAKWPK 283          
BLAST of mRNA_D-mesarthrocarpus_Contig11168.1.1 vs. uniprot
Match: A0A024TQW7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TQW7_9STRA)

HSP 1 Score: 123 bits (308), Expect = 7.880e-30
Identity = 76/196 (38.78%), Postives = 114/196 (58.16%), Query Frame = 1
Query:    1 RTSYRKWAVKSGIPLSSLWR--RCKLVEAGSTN-----GGSSRYCRTSRSAIGGALSHMHGKGGTGVVVDDMYDRVHVDEMWFYVMKDGKGINLHPEEDAPKPQRPQNKLFITKVMFLAAVARPRTISD-GVWFDGKIGIWPIADTVSAMRSSKNRKKGTMMLKPVTVNAERYKKLMIDKGIPAIKARIPRPPVIR 564
            RTS R  A K+GI L++L R  R  +  A S++       +++Y R         L +   K G  +++D M D VH+DE WFY+ ++ +   L P E  P  ++ +NK FITKVMFL+AVARPR + +   W+DGKIG WP    V AMR+S NR  G++  K + V  + Y+  ++D+ +PAI ++ P PP +R
Sbjct:   71 RTSLRSIAEKTGIKLATLHRYLRLGMFRAHSSSIRPMLTDANKYAR---------LKYAANKVGPDMMMDAMLDCVHLDEKWFYITRETRKFYLVPGEKGPD-RKCKNKRFITKVMFLSAVARPRYVDETDQWWDGKIGTWPFTAVVPAMRTSVNRVAGSLETKSINVTKDVYRSFLVDRVLPAIVSKWPGPPSVR 256          
BLAST of mRNA_D-mesarthrocarpus_Contig11168.1.1 vs. uniprot
Match: A0A6A4ZA66_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZA66_9STRA)

HSP 1 Score: 125 bits (313), Expect = 9.750e-30
Identity = 82/188 (43.62%), Postives = 106/188 (56.38%), Query Frame = 1
Query:    1 RTSYRKWAVKSGIPLSSL---WRRCKLVEAGSTNGGSSRYCRTSRSAIG--GALSHMHGKGGTGVVVDDMYDRVHVDEMWFYVMKDGKGINLHPEEDAPKPQRPQNKLFITKVMFLAAVARPRTISD-GVWFDGKIGIWPIADTVSAMRSSKNRKKGTMMLKPVTVNAERYKKLMIDKGIPAIKARIP 546
            RT++R  A    +P S+L   +RR   V+  ST          S  AI    A+ H+H  G T    D M D VHVDE WF+  +  K   L  +ED P  +  ++K FITKVMFL+AVARPR   D   WFDGKIG W   + V A+R S+NR  GTM+ KPV+V  E Y  +++D  IPAIKA+ P
Sbjct:   98 RTTFRSIAAAMSMPKSTLHDYYRRGIFVKYSSTV---KPALMDSNKAIRLKWAIDHVHPVGPTDYTFDSMMDCVHVDEKWFFATRVHKSYYLATDED-PHHRTVKSKKFITKVMFLSAVARPRWDHDKDEWFDGKIGTWHFTERVPALRGSRNRPAGTMVTKPVSVTREVYTTMLLDNVIPAIKAKWP 281          
BLAST of mRNA_D-mesarthrocarpus_Contig11168.1.1 vs. uniprot
Match: A0A6G0XA16_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XA16_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.280e-29
Identity = 80/199 (40.20%), Postives = 113/199 (56.78%), Query Frame = 1
Query:    1 RTSYRKWAVKSGIPLSSLWRRCK--LVEAGSTNGGSSRYCRTSRSAIGGALSHMHGKGGTGVVVDDMYDRVHVDEMWFYVMKDGKGINLHPEEDAPKPQRPQNKLFITKVMFLAAVARPR-TISDGVWFDGKIGIWPIADTVSAMRSSKNRKKGTMMLKPVTVNAERYKKLMIDKGIPAIKARIPRPPVIRSSCSRMVQ 588
            RT  RK A    +P ++L R  K  +V   S+N           + +  AL H+  +GG     DDM D VH+DE WF++ K      L P+E+ P  +  ++K  ITKVMF+AAVARPR   +   WFDGKIG+WP    V A RSS+NR  GT+ L+ + VN E YK +++ K IPAIK + P    +RS+ + ++Q
Sbjct:   72 RTCLRKTAKALQMPYTTLQRYFKRGVVVKYSSNVKPKLTEANKLARVKWALDHVRYRGGLNF--DDMMDVVHIDEKWFFMTKLKTNYYLAPDEEPPH-RTERSKQHITKVMFMAAVARPRWDEATRTWFDGKIGVWPFVIEVPAARSSRNRPAGTLELQTIPVNKETYKDMLLSKVIPAIKEKWP----LRSTRNVVIQ 263          
BLAST of mRNA_D-mesarthrocarpus_Contig11168.1.1 vs. uniprot
Match: A0A485LKI0_9STRA (Aste57867_22629 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKI0_9STRA)

HSP 1 Score: 116 bits (291), Expect = 6.600e-29
Identity = 60/125 (48.00%), Postives = 88/125 (70.40%), Query Frame = 1
Query:  178 VVVDDMYDRVHVDEMWFYVMKDGKGINLHPEEDAPKPQRPQNKLFITKVMFLAAVARPRTISD-GVWFDGKIGIWPIADTVSAMRSSKNRKKGTMMLKPVTVNAERYKKLMIDKGIPAIKARIPR 549
            +V++DM + VH+DE WFY+ K  +   L P E  P+ ++ ++K FITKVMFL+AVARPR I D G+W+DGKIG WP  ++V+A R+S NR   T   KP+TV  + Y++ ++DK +PAI A+ P+
Sbjct:   47 MVMNDMLNYVHLDEKWFYLSKATRTFYLVPGEREPE-RKCKSKRFITKVMFLSAVARPRYIHDTGLWWDGKIGTWPFVESVTAQRASVNRPADTYETKPITVTKDVYREFIVDKVLPAIAAKWPK 170          
BLAST of mRNA_D-mesarthrocarpus_Contig11168.1.1 vs. uniprot
Match: W4GP40_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GP40_9STRA)

HSP 1 Score: 119 bits (298), Expect = 7.760e-29
Identity = 64/127 (50.39%), Postives = 83/127 (65.35%), Query Frame = 1
Query:  169 GTGVVVDDMYDRVHVDEMWFYVMKDGKGINLHPEEDAPKPQRPQNKLFITKVMFLAAVARPR-TISDGVWFDGKIGIWPIADTVSAMRSSKNRKKGTMMLKPVTVNAERYKKLMIDKGIPAIKARIP 546
            G  ++V DM D VHVDE WFY+ +  K + L P E+ P  +  ++K FITKVMFL+AVARPR   +   WFDG+IG W    TV A RSS+NR  GTM+  P TV  + Y+ ++ID  IPAIKA+ P
Sbjct:   77 GPDLMVHDMMDYVHVDEKWFYMTRVKKTLYLLPGEEPPH-RSTKSKRFITKVMFLSAVARPRWNYNTNEWFDGRIGTWHFTQTVPAQRSSRNRPSGTMVTVPCTVTRDTYRDMLIDNVIPAIKAKWP 202          
BLAST of mRNA_D-mesarthrocarpus_Contig11168.1.1 vs. uniprot
Match: A0A6A5A6A6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A6A6_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.410e-28
Identity = 70/182 (38.46%), Postives = 108/182 (59.34%), Query Frame = 1
Query:   13 RKWAVKSGIPLSSLWRRCKLVEAGSTNGGSSRYCRTSRSAIGG---ALSHMHGKGGTGVVVDDMYDRVHVDEMWFYVMKDGKGINLHPEEDAPKPQRPQNKLFITKVMFLAAVARPR-TISDGVWFDGKIGIWPIADTVSAMRSSKNRKKGTMMLKPVTVNAERYKKLMIDKGIPAIKARIP 546
            R  A +SG+P +++ R  K  +        S+   T  +A+     A++ +H       + D MY  VHVDE WF++    K + ++ +E+    +  ++K FITKVMFLAAVARPR   + G  F GKIG+WP  + V A R+S+NR KGT++L P  V AE Y+ +++DK +PAI+A++P
Sbjct:    2 RSLAAQSGVPKTTIIRHMKNDKTLKAKSNYSKPYLTDANAVHRMQYAMAFLH-PSPNRFIFDSMYQTVHVDEKWFFLTTAKKRVYVYADEEVAL-RALKSKRFITKVMFLAAVARPRFDHNKGSMFSGKIGVWPFVEQVVAQRNSRNRPKGTVLLVPQAVTAEVYRTMILDKVVPAIQAKMP 181          
BLAST of mRNA_D-mesarthrocarpus_Contig11168.1.1 vs. uniprot
Match: A0A6A4ZVF9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZVF9_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.550e-28
Identity = 63/127 (49.61%), Postives = 83/127 (65.35%), Query Frame = 1
Query:  169 GTGVVVDDMYDRVHVDEMWFYVMKDGKGINLHPEEDAPKPQRPQNKLFITKVMFLAAVARPR-TISDGVWFDGKIGIWPIADTVSAMRSSKNRKKGTMMLKPVTVNAERYKKLMIDKGIPAIKARIP 546
            G  ++V DM D VHVDE WFY+ +  K + L P E+ P  +  ++K FITKVMFL+AVARPR   +   WFDG+IG W    +V A RSS+NR  GTM+  P TV  + Y+ ++ID  IPAIKA+ P
Sbjct:  140 GPDLMVHDMMDYVHVDEKWFYMTRVKKTLYLLPGEEPPH-RSTKSKRFITKVMFLSAVARPRWNYNTNEWFDGRIGTWHFTQSVPAQRSSRNRPSGTMVTVPCTVTRDTYRDMLIDNVIPAIKAKWP 265          
BLAST of mRNA_D-mesarthrocarpus_Contig11168.1.1 vs. uniprot
Match: A0A6G0WA71_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WA71_9STRA)

HSP 1 Score: 115 bits (287), Expect = 4.360e-28
Identity = 76/192 (39.58%), Postives = 108/192 (56.25%), Query Frame = 1
Query:    1 RTSYRKWAVKSGIPLSSLWRRCKLVEAGSTNGGSSRYCRTSRSAIGGALSHMHGKGGTGVVVDDMYDRVHVDEMWFYVMKDGKGINLHPEEDAPKPQRPQNKLFITKVMFLAAVARPRTISDG-VWFDGKIGIWPIADTVSAMRSSKNRKKGTMMLKPVTVNAERYKKLMIDKGIPAIKARIPRPPVIRSSC 573
            R + RK A  + IP S+L+RR K      T      +C +       +L+  HG      +  +M++ VHVDE WFYV K  + +    +E     +  ++K F+TKVMFLAA+ARPR       +FDGK+GIWP  +   A R+SKNR KGT +L P +V AE Y+++M+ K  PAI AR+P   V R+ C
Sbjct:   36 RQTLRKLAATAKIPKSTLFRRTKDNPRRKT-----WFCASF------SLTFSHGHH----IFSNMHNLVHVDEKWFYVTKVKRKVYAFADETLAM-RHAKSKSFVTKVMFLAAIARPRYDHHRRTFFDGKLGIWPFVECTLAKRTSKNRPKGTPVLSPQSVTAEAYREMMLQKVFPAINARMPS--VDRNQC 209          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig11168.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W4GWE0_9STRA8.030e-3249.26Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A485LTD1_9STRA3.040e-3141.36Aste57867_25464 protein n=4 Tax=Aphanomyces stella... [more]
A0A024TQW7_9STRA7.880e-3038.78Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A6A4ZA66_9STRA9.750e-3043.62Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A6G0XA16_9STRA1.280e-2940.20Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485LKI0_9STRA6.600e-2948.00Aste57867_22629 protein n=1 Tax=Aphanomyces stella... [more]
W4GP40_9STRA7.760e-2950.39Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6A5A6A6_9STRA1.410e-2838.46Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6A4ZVF9_9STRA1.550e-2849.61Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A6G0WA71_9STRA4.360e-2839.58Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig11168contigD-mesarthrocarpus_Contig11168:14..609 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog157072.XP_008874808.1
Model size596
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorymitochondrion
Exons1
Evalue1.29e-30
EggNOG OGs2CMKC@1|root,2QQNW@2759|Eukaryota
Cds size594
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789242.3385363-CDS-D-mesarthrocarpus_Contig11168:15..6091680789242.3385363-CDS-D-mesarthrocarpus_Contig11168:15..609Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig11168 16..609 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig11168.1.1prot_D-mesarthrocarpus_Contig11168.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig11168 16..609 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig11168.1.1

>prot_D-mesarthrocarpus_Contig11168.1.1 ID=prot_D-mesarthrocarpus_Contig11168.1.1|Name=mRNA_D-mesarthrocarpus_Contig11168.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=198bp
RTSYRKWAVKSGIPLSSLWRRCKLVEAGSTNGGSSRYCRTSRSAIGGALS
HMHGKGGTGVVVDDMYDRVHVDEMWFYVMKDGKGINLHPEEDAPKPQRPQ
NKLFITKVMFLAAVARPRTISDGVWFDGKIGIWPIADTVSAMRSSKNRKK
GTMMLKPVTVNAERYKKLMIDKGIPAIKARIPRPPVIRSSCSRMVQSR
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mRNA from alignment at D-mesarthrocarpus_Contig11168:14..609-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig11168.1.1 ID=mRNA_D-mesarthrocarpus_Contig11168.1.1|Name=mRNA_D-mesarthrocarpus_Contig11168.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=596bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11168:14..609- (Discosporangium mesarthrocarpum MT17_79)
CGCACATCGTACCGCAAATGGGCGGTCAAATCGGGGATCCCCCTCTCCTC GTTGTGGCGCCGGTGCAAGCTGGTGGAAGCAGGAAGCACAAACGGTGGGT CAAGCCGGTACTGTCGGACAAGCAGAAGCGCGATAGGGGGAGCGCTGAGC CACATGCACGGGAAGGGAGGAACTGGGGTGGTGGTGGACGACATGTACGA CCGGGTCCATGTGGATGAGATGTGGTTCTACGTGATGAAGGACGGGAAAG GAATAAACTTGCACCCAGAAGAGGACGCCCCCAAACCGCAAAGGCCCCAG AACAAGCTATTCATCACCAAGGTGATGTTCCTTGCTGCTGTGGCAAGGCC TAGGACGATCTCCGATGGGGTGTGGTTTGACGGCAAGATCGGTATCTGGC CCATCGCGGATACTGTGTCGGCAATGCGCAGCAGTAAGAACCGCAAGAAG GGGACTATGATGCTGAAACCAGTCACGGTCAACGCGGAGAGGTACAAGAA ACTCATGATCGATAAGGGCATCCCCGCAATCAAGGCGAGAATACCTAGAC CACCAGTCATACGATCTTCGTGCAGCAGGATGGTACAAAGCCGCAC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig11168:14..609-

>mRNA_D-mesarthrocarpus_Contig11168.1.1 ID=mRNA_D-mesarthrocarpus_Contig11168.1.1|Name=mRNA_D-mesarthrocarpus_Contig11168.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=594bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11168:14..609- (Discosporangium mesarthrocarpum MT17_79)
CGCACATCGTACCGCAAATGGGCGGTCAAATCGGGGATCCCCCTCTCCTC
GTTGTGGCGCCGGTGCAAGCTGGTGGAAGCAGGAAGCACAAACGGTGGGT
CAAGCCGGTACTGTCGGACAAGCAGAAGCGCGATAGGGGGAGCGCTGAGC
CACATGCACGGGAAGGGAGGAACTGGGGTGGTGGTGGACGACATGTACGA
CCGGGTCCATGTGGATGAGATGTGGTTCTACGTGATGAAGGACGGGAAAG
GAATAAACTTGCACCCAGAAGAGGACGCCCCCAAACCGCAAAGGCCCCAG
AACAAGCTATTCATCACCAAGGTGATGTTCCTTGCTGCTGTGGCAAGGCC
TAGGACGATCTCCGATGGGGTGTGGTTTGACGGCAAGATCGGTATCTGGC
CCATCGCGGATACTGTGTCGGCAATGCGCAGCAGTAAGAACCGCAAGAAG
GGGACTATGATGCTGAAACCAGTCACGGTCAACGCGGAGAGGTACAAGAA
ACTCATGATCGATAAGGGCATCCCCGCAATCAAGGCGAGAATACCTAGAC
CACCAGTCATACGATCTTCGTGCAGCAGGATGGTACAAAGCCGC
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