mRNA_D-mesarthrocarpus_Contig11129.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig11129.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig11129.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig11129.1.1 vs. uniprot
Match: A0A6H5JHX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHX0_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.260e-16
Identity = 43/78 (55.13%), Postives = 57/78 (73.08%), Query Frame = 1 
Query:   10 QGALTDLSQTLLGDLPSSGDAATTSVDASIEKAYFCGSDKRMRFDSFPTARVAFAFEVTPETRSTRAVPLMLAQALMG 243
            QGALTD++QTLLGD+ +S  +A   VD ++E AYF GSDKRMR+DS P A VAFAF+  P   S  ++ +M+ QAL+G
Sbjct:  124 QGALTDMAQTLLGDVAASSSSA---VDEAVEPAYFLGSDKRMRYDSMPNAHVAFAFKAPP-AGSKHSISIMMVQALLG 197
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BLAST of mRNA_D-mesarthrocarpus_Contig11129.1.1 vs. uniprot
Match: D8LCM5_ECTSI (Mitochondrial Processing Peptidase beta subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCM5_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 2.080e-16
Identity = 43/78 (55.13%), Postives = 57/78 (73.08%), Query Frame = 1 
Query:   10 QGALTDLSQTLLGDLPSSGDAATTSVDASIEKAYFCGSDKRMRFDSFPTARVAFAFEVTPETRSTRAVPLMLAQALMG 243
            QG+LTD++QTLLGD+ +S  +A   VD ++E AYF GSDKRMR+DS P A VAFAF+  P   S  ++ LM+ QAL+G
Sbjct:  240 QGSLTDMAQTLLGDVAASSSSA---VDEAVEPAYFLGSDKRMRYDSMPNAHVAFAFKAPP-AGSKHSISLMMVQALLG 313
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BLAST of mRNA_D-mesarthrocarpus_Contig11129.1.1 vs. uniprot
Match: A0A6V1PYM0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PYM0_HETAK)

HSP 1 Score: 54.7 bits (130), Expect = 1.220e-6
Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 1 
Query:   97 IEKAYFCGSDKRMRFDSFPTARVAFAFEVTPETRSTRAVPLMLAQALMG 243
            +E   FCGSDKR+R+DS  TA+VA AFE    T S ++VPLML Q L+G
Sbjct:  240 MEAGIFCGSDKRIRYDSMKTAKVALAFETGGWT-SEQSVPLMLMQTLLG 287
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BLAST of mRNA_D-mesarthrocarpus_Contig11129.1.1 vs. uniprot
Match: A0A836CKR9_9STRA (Metalloenzyme, LuxS/M16 peptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKR9_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.220e-6
Identity = 35/67 (52.24%), Postives = 40/67 (59.70%), Query Frame = 1 
Query:   43 LGDLPSSGDAATTSVDASIEKAYFCGSDKRMRFDSFPTARVAFAFEVTPETRSTRAVPLMLAQALMG 243
            LG  P  G A    VDA +  A F GSDKR+RFD+ P ARVA AF+  P   S  A+PL LA A MG
Sbjct:  246 LGARPGGGAA---DVDAPLADAPFVGSDKRIRFDNKPLARVALAFK-GPAATSEYALPLQLAAATMG 308
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BLAST of mRNA_D-mesarthrocarpus_Contig11129.1.1 vs. uniprot
Match: A0A4D9D6M3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6M3_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 7.050e-5
Identity = 27/60 (45.00%), Postives = 36/60 (60.00%), Query Frame = 1 
Query:   64 GDAATTSVDASIEKAYFCGSDKRMRFDSFPTARVAFAFEVTPETRSTRAVPLMLAQALMG 243
            G   T+++D     + F GSD R RFDS+P A VA AFE T   RS   +PL+L Q ++G
Sbjct:  231 GAGPTSALDEPATPSVFTGSDVRARFDSYPLAHVALAFE-TAGWRSKLQMPLLLVQTIIG 289
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig11129.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JHX0_9PHAE1.260e-1655.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCM5_ECTSI2.080e-1655.13Mitochondrial Processing Peptidase beta subunit n=... [more]
A0A6V1PYM0_HETAK1.220e-657.14Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836CKR9_9STRA1.220e-652.24Metalloenzyme, LuxS/M16 peptidase-like protein n=1... [more]
A0A4D9D6M3_9STRA7.050e-545.00Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig11129contigD-mesarthrocarpus_Contig11129:87..359 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog164328.Phyra71021
PFAMsPeptidase_M16,Peptidase_M16_C
Model size273
Max annot lvl4776|Peronosporales
KEGG koko:K17732
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.58e-05
EggNOG OGsCOG0612@1|root,KOG0960@2759|Eukaryota,3QA0P@4776|Peronosporales
EC3.4.24.64
DescriptionInsulinase (Peptidase family M16)
Cds size273
COG categoryO
BRITEko00000,ko01000,ko01002,ko03029
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789239.0420437-CDS-D-mesarthrocarpus_Contig11129:86..3591680789239.0420437-CDS-D-mesarthrocarpus_Contig11129:86..359Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig11129 87..359 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig11129.1.1prot_D-mesarthrocarpus_Contig11129.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig11129 87..359 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig11129.1.1

>prot_D-mesarthrocarpus_Contig11129.1.1 ID=prot_D-mesarthrocarpus_Contig11129.1.1|Name=mRNA_D-mesarthrocarpus_Contig11129.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=91bp
IPHQGALTDLSQTLLGDLPSSGDAATTSVDASIEKAYFCGSDKRMRFDSF
PTARVAFAFEVTPETRSTRAVPLMLAQALMGEKLGLRVRV*
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mRNA from alignment at D-mesarthrocarpus_Contig11129:87..359+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig11129.1.1 ID=mRNA_D-mesarthrocarpus_Contig11129.1.1|Name=mRNA_D-mesarthrocarpus_Contig11129.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=273bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11129:87..359+ (Discosporangium mesarthrocarpum MT17_79)
ATCCCCCATCAGGGCGCCCTGACAGACCTGAGTCAGACCCTCCTGGGGGA
CCTGCCGTCTTCAGGCGATGCGGCGACAACCTCAGTGGATGCCTCCATTG
AGAAGGCCTATTTCTGTGGGTCAGACAAGCGCATGCGTTTCGACTCCTTC
CCCACTGCCAGGGTGGCCTTTGCCTTCGAGGTCACTCCTGAGACCAGGAG
CACCCGGGCTGTGCCCCTCATGCTTGCCCAGGCACTCATGGGTGAGAAGC
TGGGGTTAAGGGTTAGGGTTTAG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig11129:87..359+

>mRNA_D-mesarthrocarpus_Contig11129.1.1 ID=mRNA_D-mesarthrocarpus_Contig11129.1.1|Name=mRNA_D-mesarthrocarpus_Contig11129.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=273bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11129:87..359+ (Discosporangium mesarthrocarpum MT17_79)
ATCCCCCATCAGGGCGCCCTGACAGACCTGAGTCAGACCCTCCTGGGGGA
CCTGCCGTCTTCAGGCGATGCGGCGACAACCTCAGTGGATGCCTCCATTG
AGAAGGCCTATTTCTGTGGGTCAGACAAGCGCATGCGTTTCGACTCCTTC
CCCACTGCCAGGGTGGCCTTTGCCTTCGAGGTCACTCCTGAGACCAGGAG
CACCCGGGCTGTGCCCCTCATGCTTGCCCAGGCACTCATGGGTGAGAAGC
TGGGGTTAAGGGTTAGGGTTTAG
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