mRNA_D-mesarthrocarpus_Contig11120.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig11120.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig11120.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig11120.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig11120contigD-mesarthrocarpus_Contig11120:107..1771 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size807
Hectar predicted targeting categoryother localisation
Exons3
Cds size804
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789238.5425315-CDS-D-mesarthrocarpus_Contig11120:106..6761680789238.5425315-CDS-D-mesarthrocarpus_Contig11120:106..676Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig11120 107..676 +
1680789238.5538337-CDS-D-mesarthrocarpus_Contig11120:709..7701680789238.5538337-CDS-D-mesarthrocarpus_Contig11120:709..770Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig11120 710..770 +
1680789238.5637062-CDS-D-mesarthrocarpus_Contig11120:1597..17701680789238.5637062-CDS-D-mesarthrocarpus_Contig11120:1597..1770Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig11120 1598..1770 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig11120.1.1prot_D-mesarthrocarpus_Contig11120.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig11120 107..1770 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig11120.1.1

>prot_D-mesarthrocarpus_Contig11120.1.1 ID=prot_D-mesarthrocarpus_Contig11120.1.1|Name=mRNA_D-mesarthrocarpus_Contig11120.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=268bp
KSKSQGLTGITGIMPEKLEELVVDSQQEGLTDAVRGPSAGLRLDEGQEQE
QEGDNSGKPGRDGVIKNEAEAGRGRGAVAESEVEQGTGVGVAADSPSPGP
SSKQASHQMGDSPPPLLPALGRRSRKEKDGGCVTRLGREQLRNSSSSSPV
WRPRQRAFGSGSVGWQQRSQPQVSPEPPPRPQKLLPVFDPDGELPFFVVE
SWGGKGPIVGETDAGSPGRDGQGNDTHKASSAPAATVTTPPGLLNSWKGL
GKSTGAMLASSPVVVSTG
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mRNA from alignment at D-mesarthrocarpus_Contig11120:107..1771+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig11120.1.1 ID=mRNA_D-mesarthrocarpus_Contig11120.1.1|Name=mRNA_D-mesarthrocarpus_Contig11120.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1665bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11120:107..1771+ (Discosporangium mesarthrocarpum MT17_79)
AAGAGCAAGAGCCAGGGGCTGACAGGCATTACTGGGATTATGCCAGAGAA
GCTGGAGGAGCTGGTGGTAGACTCCCAGCAGGAAGGGCTGACCGACGCAG
TAAGAGGGCCGTCAGCAGGGTTGAGGCTGGATGAGGGTCAGGAGCAGGAA
CAGGAGGGGGATAATAGTGGCAAACCGGGCAGGGACGGGGTCATCAAGAA
TGAGGCAGAAGCGGGGAGGGGAAGGGGGGCAGTGGCAGAATCAGAGGTGG
AGCAAGGCACAGGCGTGGGAGTGGCAGCGGACAGCCCATCCCCGGGCCCC
AGCAGCAAGCAGGCCAGCCACCAGATGGGTGATTCGCCACCCCCACTCCT
GCCAGCCCTTGGGAGAAGGTCCAGGAAGGAAAAAGATGGGGGGTGCGTCA
CGAGGCTGGGAAGAGAGCAGCTGAGGAATAGCAGCAGCTCCAGCCCTGTC
TGGCGGCCAAGGCAGCGAGCATTCGGGAGCGGGTCGGTTGGGTGGCAGCA
GCGGTCACAGCCCCAGGTCTCCCCAGAGCCACCCCCGCGGCCCCAGAAGC
TGCTCCCAGTGTTTGACCCAGTGCTGCATGCCGTCCGGGGGGGAGACGGG
AAGGATGGGGAGCTCCCGTTCTTCGTCGTGGAGTCTTGGGGGGGGAAGGG
GCCAATAGTGGGAGGTGACAGAGAGTCAGTTCATGTGTGTGTTTGTCCTT
GGTATATCTCCTCGGGATGTTTGAGGGGGGCAGGAAAAATTGCTCTTTTT
CCCTTTTTATCGCTTCTTTACCCTTGAACTCTTGGACACGTGAACACTTG
TAGAGGGCTAGTGCTCTGGTTCGTTGGCAGTTATTTTTACCTCACTGTCG
CATGCTTATACCCATTAGACCTCAACCATGTAATCCTTTGTCAGTGCTTT
TTTCATCTTTATTTGGGGAGGGGCGGAAGGGGGGGAAGGGAGAAGGGATA
GCTTTGTCTTTCCTCCGCTCAGCCCTGCCTCTGCTCTTTACTGCTTGCGG
GATATAATACCTCAATTATCCATGAGTATGTGACACTCACTTCCCCCACA
AGGATTCATGGTACAGTGTAGGCTCCGGGGGGGGGGGGGGATTGTGTAAA
ACTGCACTTAAGGCACCTTGTCGAAGCTTGGGGTGACGCGGATTTTTTTT
TCTGCTTCATAGATGCTAGCTCATCCTTGCAGCCCTACTACAGCAGGAGC
CATTTCATTCAAGTAGAAAAAAGGTGAGCTGTCGAAACAATGCCAGAAGT
GCTCCTGACCAACTGGAGGTACAGCATCTTGTGTCTTTGTTTTTTATTTG
GCCCTTTGTTCTTTCTTTTGTTCTGCCGCTGATGCATAACCACCCCGACA
CCCTCCCAACAACCCCGCAAATAGTAAGCACAGCGCAGAGTACCTCTTAC
TTCACGCTTACCTCCCTGTGCCTTCCCTCTTCCCTTCCCCCCATCCCCCC
TGCCTCCCCGCCTGTTTATTGCATTGGATGGCTGGGTATAGAAACTGACG
CAGGCTCCCCTGGGCGGGATGGTCAAGGGAACGACACCCACAAGGCATCC
TCGGCTCCAGCGGCCACCGTGACAACCCCACCAGGACTCCTGAACTCTTG
GAAAGGTCTGGGCAAGTCAACTGGTGCCATGCTGGCAAGCAGCCCAGTGG
TGGTGTCCACTGGCA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig11120:107..1771+

>mRNA_D-mesarthrocarpus_Contig11120.1.1 ID=mRNA_D-mesarthrocarpus_Contig11120.1.1|Name=mRNA_D-mesarthrocarpus_Contig11120.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=804bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11120:107..1771+ (Discosporangium mesarthrocarpum MT17_79)
AAGAGCAAGAGCCAGGGGCTGACAGGCATTACTGGGATTATGCCAGAGAA
GCTGGAGGAGCTGGTGGTAGACTCCCAGCAGGAAGGGCTGACCGACGCAG
TAAGAGGGCCGTCAGCAGGGTTGAGGCTGGATGAGGGTCAGGAGCAGGAA
CAGGAGGGGGATAATAGTGGCAAACCGGGCAGGGACGGGGTCATCAAGAA
TGAGGCAGAAGCGGGGAGGGGAAGGGGGGCAGTGGCAGAATCAGAGGTGG
AGCAAGGCACAGGCGTGGGAGTGGCAGCGGACAGCCCATCCCCGGGCCCC
AGCAGCAAGCAGGCCAGCCACCAGATGGGTGATTCGCCACCCCCACTCCT
GCCAGCCCTTGGGAGAAGGTCCAGGAAGGAAAAAGATGGGGGGTGCGTCA
CGAGGCTGGGAAGAGAGCAGCTGAGGAATAGCAGCAGCTCCAGCCCTGTC
TGGCGGCCAAGGCAGCGAGCATTCGGGAGCGGGTCGGTTGGGTGGCAGCA
GCGGTCACAGCCCCAGGTCTCCCCAGAGCCACCCCCGCGGCCCCAGAAGC
TGCTCCCAGTGTTTGACCCAGATGGGGAGCTCCCGTTCTTCGTCGTGGAG
TCTTGGGGGGGGAAGGGGCCAATAGTGGGAGAAACTGACGCAGGCTCCCC
TGGGCGGGATGGTCAAGGGAACGACACCCACAAGGCATCCTCGGCTCCAG
CGGCCACCGTGACAACCCCACCAGGACTCCTGAACTCTTGGAAAGGTCTG
GGCAAGTCAACTGGTGCCATGCTGGCAAGCAGCCCAGTGGTGGTGTCCAC
TGGC
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