mRNA_D-mesarthrocarpus_Contig1112.2.2 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1112.2.2
Unique NamemRNA_D-mesarthrocarpus_Contig1112.2.2
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig1112.2.2 vs. uniprot
Match: D7FMI3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMI3_ECTSI)

HSP 1 Score: 275 bits (703), Expect = 2.360e-83
Identity = 137/245 (55.92%), Postives = 161/245 (65.71%), Query Frame = 2 
Query:  329 SQEKILDVVTSGDLAWEGLRARCEEPFNSLGNRCLVLGNGHDDQEYVESTGCLLEEVEQADFILARGSFVVVGSKGERQYHPNIMEGRGAEEVEAILVKARERGIPMLVTNPDFLRPGTNDPMPGLIGKTYKARGGRVEVVGKPYDLVYDKCFSILQM------DPSQEDKSSVCAVGDSLSHDIQGAVNSGLSSVFIASGVHYEELGVEQGSPEMPDPSLFPPLFASHLEGGEAPTHSTPSFRW 1045
            S   ILDVVTSG +AW+GL+ R +EPF SLG +CLV GNG DD EYV S GC L EV+ ADFILARGSFVV  S G R+Y P +M G G EE    +    ERG PMLVTNPDFLRPGTNDPMPGLIGK Y   GG V  +GKP+  VY  CF  L         P    ++ + AVGDSL HDI GA+ + L+SVF+A GVH++EL VEQG   +P    +   F+ HLEG   PTH  P+FRW
Sbjct:  128 STGSILDVVTSGQIAWDGLQDRVDEPFKSLGAKCLVFGNGDDDLEYVSSCGCTLAEVQDADFILARGSFVVADSNGTRRYTPTVMTGEGKEETHKAMRLMLERGAPMLVTNPDFLRPGTNDPMPGLIGKAYAEMGGTVHYIGKPHPAVYQACFHALATAKESAPPPDAPTRAKIVAVGDSLPHDILGALRAQLASVFVAGGVHFDELRVEQGGAGVPSDEAYSAAFSKHLEGEGTPTHVMPAFRW 372
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BLAST of mRNA_D-mesarthrocarpus_Contig1112.2.2 vs. uniprot
Match: A0A835Z8N2_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8N2_9STRA)

HSP 1 Score: 246 bits (629), Expect = 2.840e-73
Identity = 126/235 (53.62%), Postives = 155/235 (65.96%), Query Frame = 2 
Query:  341 ILDVVTSGDLAWEGLRARCEEPFNSLGNRCLVLGNGHDDQEYVESTGCLLEEVEQADFILARGSFVVVGSKGERQYHPNIMEGRGAEEVEAILVKARERGIPMLVTNPDFLRPGTNDPMPGLIGKTYKARGGRVEVVGKPYDLVYDKCFSILQMDPSQEDKSSVCAVGDSLSHDIQGAVNSGLSSVFIASGVHYEELGVEQGSPEMPDPSLFPPLFASHLEGGEAPTHSTPSFRW 1045
            ILDVVTSGD+AWE L    +EPF SLG  CLVLGNG DD +YV++ G  L + E+ DF+LARGSF + G+  + Q H +I+E     EV A L  AR RG+P+LVTNPDFLRPGTNDPMPGLIG+ + A GG V  VGKPYDLVY +C +        ED   VC VGDSLSHDI+GA+ +G+ S+F+ SGVH  ELG+EQGS   P       +  +HL     PTH     +W
Sbjct:   78 ILDVVTSGDVAWEELHTPTQEPFKSLGRSCLVLGNGDDDVDYVKTAGLTLADAERCDFVLARGSFALTGATSKIQEHASILE---RPEVAAALDTARSRGVPLLVTNPDFLRPGTNDPMPGLIGRDFAAAGGAVHWVGKPYDLVYARCRAAAAAG-GVEDARRVCGVGDSLSHDIKGALRAGIDSMFVLSGVHSAELGIEQGSDAWPAHDAVARVLQAHLPPDARPTHIITHLKW 308
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BLAST of mRNA_D-mesarthrocarpus_Contig1112.2.2 vs. uniprot
Match: A0A7S4D550_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D550_HETAK)

HSP 1 Score: 216 bits (549), Expect = 7.550e-61
Identity = 111/248 (44.76%), Postives = 145/248 (58.47%), Query Frame = 2 
Query:  302 RGCAFEPSHSQEKILDVVTSGDLAWEGLRARCEEPFNSLGNRCLVLGNGHDDQEYVESTGCLLEEVEQADFILARGSFVVVGSKGERQYHPNIMEGRGAEEVEAILVKARERGIPMLVTNPDFLRPGTNDPMPGLIGKTYKARGGRVEVVGKPYDLVYDKCFSILQMDPSQEDKSSVCAVGDSLSHDIQGAVNSGLSSVFIASGVHYEELGVEQGSPEMPDPSLFPPLFASHLEGGEAPTHSTPSFRW 1045
            R   F P H        VTSGD  +E + +R  EPF SLG RC+V GN  DD+ Y+    C L  +E+ADF+LARG+FV++ +    +   ++        V A+L  A  RG+P+LV NPD  RPG   PMPG+IGK Y+  GG V   GKP+  VY+ CF  L+ D    D+  VCAVGDSL HDI GA  +G+ S+FI  G+H EELG+++G  E P       L+A H  GG  PTHS P+F W
Sbjct:  125 RKMGFNPDH----FCGFVTSGDTVYEEMISRAREPFKSLGTRCVVFGNADDDKAYLSEMQCELSTIEEADFLLARGNFVILDAVETTKCDRSL---ESEARVAAVLAAAAARGLPLLVANPDIARPGCGSPMPGVIGKQYEDMGGTVHYTGKPHSSVYELCFQALEEDGGNRDR--VCAVGDSLDHDILGASRAGIESIFIIGGIHSEELGIKEGGRECPSQKALEKLYARH--GGGVPTHSMPAFVW 361
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BLAST of mRNA_D-mesarthrocarpus_Contig1112.2.2 vs. uniprot
Match: W7UB69_9STRA (Sugar phosphatase of the had superfamily n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7UB69_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.030e-51
Identity = 113/246 (45.93%), Postives = 150/246 (60.98%), Query Frame = 2 
Query:  335 EKILDVVTSGDLAWEGLRA-RCEEPFNSLGNRCLVLGNGHDDQEYVESTGCLLEEVEQADFILARGSFVVVGSKGERQYHPNIMEGR---GAEEVEAILVKARERGIPMLVTNPDFLRPG-TNDPMPGLIGKTYKARGGRVEVVGKPYDLVYDKCFSILQMDPSQEDKSS--VCAVGDSLSHDIQGAVNSGLSSVFIASGVHYEELGVEQGS-PEMPDPSLFPPLFASHLEG-GEAPTHSTPSFRW 1045
            EK LDV+TSG+L + GL+  R     N  G   LV G+G +D+EYVES GC +  VE ADF+LARG F ++ S            GR    + E EA+  KA  RG+PM+V+NPD +RPG  NDPMPGL+G+ Y+ +GG+V  VGKPY LVY +C   L        K+   +CA+GDS+ +D++GAV+ G +SV +  G+H E LGV QGS  E+P  SL    F   LEG    P+H+ P FRW
Sbjct:   89 EKYLDVITSGELTYLGLKPPRSPSYANIRGTNVLVFGSGDEDREYVESLGCRVSPVEAADFLLARGPFTILDSPDPATPPQTFGPGRILHESAEFEAVAAKAIARGLPMIVSNPDIVRPGGDNDPMPGLLGRAYEQKGGQVMYVGKPYPLVYQECRKRLVGLKPAGGKADWRICAIGDSMWNDVKGAVDEGWASVLVTDGIHAESLGVRQGSGEEVPGESLD--FF---LEGFAYRPSHTIPCFRW 329
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BLAST of mRNA_D-mesarthrocarpus_Contig1112.2.2 vs. uniprot
Match: A0A7S0EEY8_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EEY8_9CRYP)

HSP 1 Score: 179 bits (454), Expect = 4.960e-47
Identity = 106/252 (42.06%), Postives = 149/252 (59.13%), Query Frame = 2 
Query:  341 ILDVVTSGDLAWEGLRAR-CEEPFNSLGNRCLVLGNGHDDQEYVESTGCLLEEVEQADFILARGSFVVVGS------KGERQYHPNIMEGRGAEEVEAILVKARERGIPMLVTNPDFLRPGTND-PMPGLIGKTYKAR-------GGRVEVVGKPYDLVYDKCFSILQMDPSQEDKSSVCAVGDSLSHDIQGAVNSGLSSVFIASGVHYEELGVEQGSPEMPDPSLFPPLFASHLEGGEA--PTHSTPSFRW 1045
            ILD++TSG++ W+ L  R    PF SLG++  V GNG +D EYV+S G    +VE+ADFILARG F + GS      +G ++Y    ME R   ++ A       R +PM+VTNPDF+RP  ND PMPG +   Y++          +V  VGKP+ LVYD+ F  L+ +    DK+ VCA+GDS+ HDI GA  +G+ S+FIA G+H + LG++QG   +P  +L         +G  A  PTH+ P F+W
Sbjct:  135 ILDLITSGEVGWQCLSERPAGTPFESLGSKVYVFGNGEEDDEYVKSAGLEFADVEEADFILARGLFTMQGSSDVLHREGPQKYEAWDMEARSCLQIAA------NRLLPMVVTNPDFVRPDGNDSPMPGKLAAMYESMLMGQLCAARKVIYVGKPHSLVYDQAFERLKEESGDIDKARVCAIGDSILHDIAGAHRTGIDSIFIADGIHADFLGLQQG---IPGQTLDQTDIERLSKGLMAIPPTHTVPHFQW 377
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BLAST of mRNA_D-mesarthrocarpus_Contig1112.2.2 vs. uniprot
Match: A0A7S4P2V8_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4P2V8_GUITH)

HSP 1 Score: 175 bits (443), Expect = 2.070e-46
Identity = 103/253 (40.71%), Postives = 143/253 (56.52%), Query Frame = 2 
Query:  341 ILDVVTSGDLAWEGLRAR-CEEPFNSLGNRCLVLGNGHDDQEYVESTGCLLEEVEQADFILARGSFVVVG------SKGERQYHPNIMEGRGAEEVEAILVKARERGIPMLVTNPDFLRP-GTNDPMPGLIGKTYKAR------GGR-VEVVGKPYDLVYDKCFSILQMDPSQEDKSSVCAVGDSLSHDIQGAVNSGLSSVFIASGVHYEELGVEQGSPEMPDPSLFPPLFASHLE---GGEAPTHSTPSFRW 1045
            ILD++TSG++ W+ L  R    PF SLGN+  V GNG +D++YV S G    ++E ADF+LARG F + G       +G  +Y    ME R   ++ A       R +PM+VTNPDF+RP G + PMPG +   Y++       G R V  VGKP+ LVY++ F  L+      D+S VCA+GDS+ HDI GA  +G+ S+FIA G+H E LG++QG P          +   HL        PTH+ P F+W
Sbjct:   51 ILDLITSGEVGWQCLSQRPAGTPFESLGNKVFVFGNGEEDEQYVTSAGLEFADIEDADFVLARGLFTMHGLSEVLQREGPNKYEAWDMEARSCLQIAA------NRLLPMVVTNPDFVRPDGKDSPMPGKLAAMYESMLMAQLCGERKVTYVGKPHSLVYEQAFQRLKEVSGDVDRSRVCAIGDSILHDIAGAHRTGIDSIFIADGIHAEFLGLQQGKPGQ----SLEQVDIEHLSRELSALPPTHAVPHFQW 293
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BLAST of mRNA_D-mesarthrocarpus_Contig1112.2.2 vs. uniprot
Match: L1J807_GUITC (Uncharacterized protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1J807_GUITC)

HSP 1 Score: 173 bits (438), Expect = 7.920e-45
Identity = 101/248 (40.73%), Postives = 143/248 (57.66%), Query Frame = 2 
Query:  341 ILDVVTSGDLAWEGLRAR-CEEPFNSLGNRCLVLGNGHDDQEYVESTGCLLEEVEQADFILARGSFVVVGSKGERQYHPNIMEGRGAEEVEAILVKARE-RGIPMLVTNPDFLRP-GTNDPMPGLIGKTYKAR------GGR-VEVVGKPYDLVYDKCFSILQMDPSQEDKSSVCAVGDSLSHDIQGAVNSGLSSVFIASGVHYEELGVEQGSPEMPDPSLFPPLFASHLE---GGEAPTHSTPSFRW 1045
            ILD++TSG++ W+ L  R    PF SLGN+  V GNG +D++YV S G    ++E ADF+LARG F + G          +++  G  + EA  ++AR    +PM+VTNPDF+RP G + PMPG +   Y++       G R V  VGKP+ LVY++ F  L+      D+S VCA+GDS+ HDI GA  +G+ S+FIA G+H E LG++QG P          +   HL        PTH+ P F+W
Sbjct:  135 ILDLITSGEVGWQCLSQRPAGTPFESLGNKVFVFGNGEEDEQYVTSAGLEFADIEDADFVLARGLFTMHGLS-------EVLQREGPNKYEAWDMEARSCLQLPMVVTNPDFVRPDGKDSPMPGKLAAMYESMLMAQLCGERKVTYVGKPHSLVYEQAFQRLKEVSGDVDRSRVCAIGDSILHDIAGAHRTGIDSIFIADGIHAEFLGLQQGKPGQ----SLEQVDIEHLSRELSALPPTHAVPHFQW 371
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BLAST of mRNA_D-mesarthrocarpus_Contig1112.2.2 vs. uniprot
Match: A0A7S0LMC8_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LMC8_9EUKA)

HSP 1 Score: 167 bits (422), Expect = 1.130e-43
Identity = 97/241 (40.25%), Postives = 140/241 (58.09%), Query Frame = 2 
Query:  344 LDVVTSGDLAWEGLRA---RCEEPFNSLGNRCLVLGNGHDDQEYVESTGCLLEEVEQADFILARGSFVVVGSKGERQYHPNIMEGRGAEEVEAILVKARERGIPMLVTNPDFLRP-GTNDPMPGLIGKTYKARGG-RVEVVGKPYDLVYDKCFSILQMDPSQEDKSSVCAVGDSLSHDIQGAVNSGLSSVFIASGVHYEELGVEQGSPEMPDPSLFPPL---FASHLEGGEAPTHSTPSFR 1042
            + V+TSGDL W G+ +   + +  F++LG RC V GNG DD EYV S+G     + +ADF+LARG F +   +    Y  ++       E+ A  +     G+P+LV+NPD LRP G + PMPG + + Y+  G   V +VGKP+ L+YD C   L+        +++  VGDSL HD+ GA  +G+ S+F+ SGVHY EL V Q S E P+ +L   L   FA   +G  APT++ P+FR
Sbjct:   30 ISVITSGDLVWRGMSSAETQADGIFSALGERCFVFGNGEDDVEYVASSGKHASPLAEADFLLARGLFALWDGEVATPYSTDL-----EAEILAEALDQANGGLPLLVSNPDVLRPDGKDSPMPGQLARRYEELGAVDVRLVGKPHPLIYDACREELEA-TGVPSSATLIGVGDSLPHDVLGAAGAGIDSLFVCSGVHYRELNVTQASAEKPEAALLSQLLDGFAREHDGC-APTYTLPAFR 263
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BLAST of mRNA_D-mesarthrocarpus_Contig1112.2.2 vs. uniprot
Match: A0A7S0J5S4_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J5S4_9EUKA)

HSP 1 Score: 164 bits (415), Expect = 3.290e-43
Identity = 95/231 (41.13%), Postives = 134/231 (58.01%), Query Frame = 2 
Query:  377 EGLRARCEEPFNSLGNRCLVLGNGHDDQEYVESTGCLLEEVEQADFILARGSFVVVGSKGERQYHPNIMEGRGAEEVEAILVKARERGIPMLVTNPDFLRP-GTNDPMPGLIGKTYKARGGR-VEVVGKPYDLVYDKCFSILQMDPSQEDKSSVCAVGDSLSHDIQGAVNSGLSSVFIASGVHYEELGVEQGSPEM-----PDPSLFPPLFASHLE--GGEAPTHSTPSFR 1042
            EGL+A    PF+ LG RC V GNG DD++YV   G L   ++QADF+LARG F ++ +  +    P   +   A+  E +L  A ++G+P+LV NPD  RP G + PMPG + K ++A G   + +VGKP+ L+Y+ C  IL  +    + ++V AVGDSL HD+ GA  +G+ SVF+  GVHY+ELG+ Q  PE      P       L  S  E   G  PTH+  +FR
Sbjct:    1 EGLKAGDAPPFDDLGARCFVFGNGEDDEDYVHGCGKLATTIDQADFVLARGLFSMLRAGPDALRQP--AQPYSAKGEEEVLEVALQKGLPLLVANPDTTRPDGKDSPMPGQLAKRFQAMGASDIRLVGKPHPLIYEACRGILA-EAGIGEGAAVAAVGDSLHHDVLGAARNGVDSVFVCGGVHYQELGIPQSGPESVEAVEPAAEKLQELLDSFAEQHDGVRPTHTLAAFR 228
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BLAST of mRNA_D-mesarthrocarpus_Contig1112.2.2 vs. uniprot
Match: A0A7S1XU23_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XU23_9STRA)

HSP 1 Score: 168 bits (426), Expect = 6.320e-43
Identity = 90/204 (44.12%), Postives = 127/204 (62.25%), Query Frame = 2 
Query:  338 KILDVVTSGDLAWEGLRARCEEPFN-SLGNRCLVLGNGHDDQEYVESTGCLLEEVEQADFILARGSFVVVGSKGERQYHPNIMEGRGAEEVEAILVKARERGIPMLVTNPDFLRP-GTNDPMPGLIGKTYKARGGRVEVVGKPYDLVYDKCFSILQMDPSQEDKSSVCAVGDSLSHDIQGAVNSGLSSVFIASGVHYEELGVEQ 943
            ++ D+VTSG+ AW  LR R   PF+ SLG+ C V GNG DD EY+ + G  +  V +ADF+ ARG F V     ++ Y          E  +A+LV ARER +PM+V NPDF+RP G   PMPG+I   Y+  GG V  +GKP+ +VY++ F +L       ++S V AVGDSL HDI+GA  +G+  +F+ASG+H +EL + +
Sbjct:  151 EMPDIVTSGEAAWTLLRERPRAPFDASLGSSCAVFGNGEDDLEYMATAGVDIAGVGEADFLFARGLFCVEDGTADKSYTD--------ERADAMLVAARERDLPMIVANPDFVRPDGKASPMPGVIAARYEKLGGTVHYIGKPHPMVYEQAFEMLA--GRGIERSHVAAVGDSLLHDIRGAQQAGIDGIFVASGIHLKELALPE 344
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1112.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMI3_ECTSI2.360e-8355.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z8N2_9STRA2.840e-7353.62HAD-like domain-containing protein n=1 Tax=Tribone... [more]
A0A7S4D550_HETAK7.550e-6144.76Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7UB69_9STRA1.030e-5145.93Sugar phosphatase of the had superfamily n=3 Tax=M... [more]
A0A7S0EEY8_9CRYP4.960e-4742.06Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S4P2V8_GUITH2.070e-4640.71Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
L1J807_GUITC7.920e-4540.73Uncharacterized protein n=3 Tax=Guillardia theta T... [more]
A0A7S0LMC8_9EUKA1.130e-4340.25Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S0J5S4_9EUKA3.290e-4341.13Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S1XU23_9STRA6.320e-4344.12Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1112contigD-mesarthrocarpus_Contig1112:17741..24087 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FMI3
PFAMsHAD_2,Hydrolase_6,Hydrolase_like
Model size1846
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue2.4e-47
EggNOG OGsCOG0647@1|root,2QU6A@2759|Eukaryota
Ec32 ortholog descriptionHAD-superfamily hydrolase, subfamily IIA
Ec32 orthologEc-23_000410.1
DescriptionHaloacid dehalogenase-like hydrolase
Cds size468
COG categoryG
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1112.2.2prot_D-mesarthrocarpus_Contig1112.2.2Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1112 18539..19945 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789238.4325795-UTR-D-mesarthrocarpus_Contig1112:17740..185381680789238.4325795-UTR-D-mesarthrocarpus_Contig1112:17740..18538Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1112 17741..18538 -
1680789238.4839308-UTR-D-mesarthrocarpus_Contig1112:19945..200001680789238.4839308-UTR-D-mesarthrocarpus_Contig1112:19945..20000Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1112 19946..20000 -
1680789238.4947038-UTR-D-mesarthrocarpus_Contig1112:22002..220641680789238.4947038-UTR-D-mesarthrocarpus_Contig1112:22002..22064Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1112 22003..22064 -
1680789238.5082164-UTR-D-mesarthrocarpus_Contig1112:23624..240871680789238.5082164-UTR-D-mesarthrocarpus_Contig1112:23624..24087Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig1112 23625..24087 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789238.4478798-CDS-D-mesarthrocarpus_Contig1112:18538..187871680789238.4478798-CDS-D-mesarthrocarpus_Contig1112:18538..18787Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1112 18539..18787 -
1680789238.4578958-CDS-D-mesarthrocarpus_Contig1112:19407..195411680789238.4578958-CDS-D-mesarthrocarpus_Contig1112:19407..19541Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1112 19408..19541 -
1680789238.4710774-CDS-D-mesarthrocarpus_Contig1112:19860..199451680789238.4710774-CDS-D-mesarthrocarpus_Contig1112:19860..19945Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1112 19861..19945 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1112.2.2

>prot_D-mesarthrocarpus_Contig1112.2.2 ID=prot_D-mesarthrocarpus_Contig1112.2.2|Name=mRNA_D-mesarthrocarpus_Contig1112.2.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=156bp
MEGRGAEEVEAILVKARERGIPMLVTNPDFLRPGTNDPMPGLIGKTYKAR
GGRVEVVGKPYDLVYDKCFSILQMDPSQEDKSSVCAVGDSLSHDIQGAVN
SGLSSVFIASGVHYEELGVEQGSPEMPDPSLFPPLFASHLEGGEAPTHST
PSFRW*
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mRNA from alignment at D-mesarthrocarpus_Contig1112:17741..24087-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1112.2.2 ID=mRNA_D-mesarthrocarpus_Contig1112.2.2|Name=mRNA_D-mesarthrocarpus_Contig1112.2.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=6347bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1112:17741..24087- (Discosporangium mesarthrocarpum MT17_79)
AATACTGTACCCGCAGTGCTGTGTAGTCACAGAGTATGGATGGGTGTCAT
CTCCGCTCTCTCGAGGTAGCCCATTCGAGTCATCAATTGACACATGTGTG
TGTGTGTGGACCATCCACGTGCCACGCACCTGAGAATGCGGCGGGAACAG
ATTCCTCGACACACAGCACGGCAAACGGTCGTTGCGATAGGTGGCCTCTC
CCCGGAGGTGATTCCCATCAAGGCATTTTTTTTGTCGCGCAAGAAGATCG
TGCCGTCCGTTTCCCCTCCGCATCCCACCACCCCGCACACCCTCCCACCC
GCGCGGTTGCGCCTTCGAACCCTCGCACTCGCAGGAGAAGATCTTAGATG
TGGTGACGAGCGGAGATCTGGCGTGGGAAGGGCTGCGGGCAAGGTGTGAG
GAGCCATTCAACTCACTCGGGAATAGATGCCTGGTCTTAGGCAATGGGCA
TGACGACCAGGAGGTGCCAGGGATTTTGTAGTTCCGTCCCCCCCGCCCGC
CTTCGCACTCTCCTTTGCTGTTCTTGTTCTTGTTGTTCTTGTTGGTGTCG
GTGTTGGTGTTGGTGTTGGTGTTCTTTTTCTTGTTCTTGTTCTTGTTTTT
GTTCTTGTTGTTCTTGTTGCTGTTGCTGTTGCTGTTGTTCTTGTTCTTGT
TGCTGTTGCTGTTGCTGTTGCTGTTGTTGTTTGGGTCATAGATCTGCTGC
TTAGAATGAACATTCGAAGGACCCCTTCCCTTGTTTCTGTTTTTTTTTTT
TCGGCTTCACGGGATGGCGAAGCAACACCCGCTTTTTTTTTTGTTTTTTG
GCTTGGACACCATTGCACGGCTAGAAGAACATGAAACTGTCGGCTAGAAG
AACATGAAACTGTCGGCTAGAAGAACATGAAACTGTCACTTCTTCCTTTT
ATTCTTCGGTTCCAGGGCTCTAACAAATTGGGACAAACAACCACTCCACT
CTGTTCGTTTTTATTTCATTCCATAGCTCTACCAAGAGGGCAACACGTCC
TGCTTTCCCTTGGATGATCCGTGATCGTGTAGCCCTGCACTTGTAGGAGG
TCATTTCTTGACTTTTGACCTCGAAAGATGGATGTCTTGGAGAAGTCGGG
TGTGGATCCAACAGTTGCAAGCCTTGGCGGTGCTTCTCAGATTCAATGCA
GTTGTGAAAGGTGGAGCTTTGCCCTGTATTAGCACAGTGTATGTCAGGGG
ATGAGGTCCGGGGCTGACCTTACCGCGAACCCACCCTTTAAAGACCGGTC
GATGCTTCATCCATCAAATTTAGGGTTAGGGTTAGGGTTAATGTTGATGG
GGAAGTCTTATGGGTAAGGATGTGTGACTGGATCCGCCTAGCCTGTTATT
TGCTGTAGTATTCACTAAGTGGTGTGTTGGGCGGTAAAGTACCACAAAGT
GCAGTAAAGTGCAGTAGTTCTTCAGTCTTTAATCCCAGTTTGCAAGGGTT
TCCTTCTTTAGAGGTTCGGCAGACCTCTGGGGTGCTTGCAGTGTTGTTGG
CATCAGGACACTTACTAATTCAGAAGAGAAAAGGTGGCCTTCAACGTTAA
AATTCAAACTGAGAGATAAGGTAAGTCCCCCCGACCTCAATATTTTAGAG
GCGAGTAGTGATTTATGCAGGTGCGGCAAAATCACTCCTGGCACCACACC
ACACTGCACCGTACCATCCACTTATTTGCAGGGCATGCGCAGCAGCTCTG
GTGGTGGCTGGACTTACTACGATATACCTGCTTGACTCTATCGCTCGCTG
CTCTTCTTCAACTTGGACAGCAGCTGTGGGACTATCATTCCTCTAACCCT
AGCCCTAACCCGACAGCCTATGCTCCAGGCGTTCATCCCCCTGAACGCTT
TCGCTGCCCTCACCGTATACTTGGAGAGGAGAACTCTCGATTTTTTGTGA
AACCGCCGCCGTAATATACACTGCAGTACGTGGGCTGACCCGATGCCCTG
ATCCCCACCGGATGGCTGTTTTGTTTTTGTCAAATCTTACAAACTCGTGG
GGACACTGCTCGCTGACACCCAGTATGTCGAAAGCACGGGGTGTCTGCTG
GAAGAGGTGGAACAGGCCGACTTCATCCTTGCCAGGTCAGGGGCTTGGTC
ACGGTAGGTCTCGGGAATTTGGTCAGGAACAGAGGGAGTATTTACCTTAG
AGTTTGGCTTGTGGGGGAGGTCCTCATCCCAAGGAGGAGTGAAAATAAAG
GTATGATGGACATCCCATGTGAGGGGTGTTGGTCATGAATAGTGCTACTG
GAACTCCTTTTCTCTTTTTGTTTGTGGCGCACGCCGCGCTGTACGCGGTT
GTTAGATCAACCAATCCACCACACTATGCGCATCCAAGAGGCGCTTTGGA
GAGAAGTCATGTGACGATGTTGTATCACAACAGTTGGCAGGTGGCACACT
CCGCAAACTGTGCGCACAAGTACAATCGTTAAGAGCCACCCCTAAGCATC
AGAGCCTGGAGCTCTCTGGTTTTGATGCGTATTTCCTTCATGTTTTGTGA
AGCGTGGCGTACATTTGGCCCGCACTCGATCAGCACTCCCGGCTGGCAAG
GAGTAGAACAGCCCGAACATGTGTGTCCCAGAATATTCCGAAGACCAGTA
CATATGGGAAGATCTGCGGCGCTGTGGGACCGTGTACTGTTCATGTCCTG
GTTATGCCTCACCCGAAGCGCCACTCGGATGAAGCAGTGCTCCGAATGTA
GAGCTTGAGGGTTGTACAAGTACAGTATGCTTTTTGTGCCTCTATTATCA
TATCCAGAAAGCAGCACCCCAAGAGTTTGTGAGACAAACGTTAGGCGGAG
TCGCAACCTGTTTTGGGCAGGACTGCCGCGCCCCCAAACAGTTGGAGAAG
TACGCAACGAGTGCAGCATTTCGAAATACTTCAAGGCCTCGTACTGAAAT
GAAATTCTTCAATTTACAGTCAGTACATGCTATTTCCCGCACCGTATTCC
AAATACGTGTTGCGGAACATTCTCCAAAGCTCCAGGCGTCCGTTTGGGCA
ACACTCCGTCCTGTGTCGGATCGTCTGATTCAATCCAAAACTCCCTTCCG
TAACACCACTGGTCGCGAACCACGTAGAAGTAGCGTACTTACACGCTAGG
AAGTACGTACTTGTTACGTGCGATACCGTATTTTCATTCTATATTTCGAA
GCATTTGGGCAGTGCTCTGGCCACACCAACAAGCCGTCCAGGCACTGTGA
TAGCGGTTGCTCCGATCTATTCCCCGCTCTATTCCCGATTGTGACCGCTG
CAAACGTGTACTTCGAGCTACATCGAATTGCACAGAGATCGAAGATGTAC
GGTGGTGGAGCTAGCCAAGAGTGTATCCCAACAGATCTTTCGAAGTAGTA
ATAAAATATCTCGGTGCCGTGGTGCTACTCTGAGTGTCCCGAGGACTCTA
CCGAGACGCGGCGATCTGTCCTTCAATCCCCACGGTACACGTGCTTCTTA
TGTATCCATGCTACGAAGAATATCCCACACACAAAGCTCCTCTTCACTTT
TTTTCGACACATCCTGGTACAAGTTATGCTTCGAGGTATGTGGCGCATGA
TCGTCGTGGCCCGTATAGAGCTCTACTGTACGGTACGGTACGGTACTGTA
CTATACTATAGAGTCTAACGAAGTCGAAATACTTCGAAGCGCTATCGTGT
CCCCGCCGCCACCTCTTGCGCTCAGTTTTTTTACCTTAAAATGGTCGGGC
AGGGAAGGGGTAGGCATTCATTAAAATCTGGGTAGGTACACTGGGAGACT
GTGCTTCGGAAGTACCTTAGGATTAGGGTAGGGATCGGGTTAGCACCGCA
AGTAGAAGAATGTGGTGAGTTGGCCTGGTTACCACCACGATTGCACTCAA
ACCCCAGCCCTAACCCTTCGTACCTGCGCCAACACGATACGAGCTTATCT
GTCTCCCCCCGACTATCACGGTCAAACGCTCTGAAGTAATGAGCACAGCG
TAGTGTTACCGCCAGCGATGTATCCAACAATGATGTATTCAAAACTCTAA
TACCTCCTTTACCTTGGCATTGGCTGTTGTCATAATGCGGTTTGTTGCTC
TTCTCCTCGGCTTTTGTCACTTCTGTTCGGTTTTCAGGGGGTCCTTTGTC
GTGGTTGGGTCAAAGGGGGAGAGGCAATACCACCCCAACATCATGGAGGG
TAGAGGTGCGGAGGAGGTGGAGGCCATCTTAGTCAAGGCGAGGGAGAGAG
GCATCCCCATGCTTGTCACCAATCCAGGTCAGCTTTGGTGTCATTGTGCT
TTGGATTAGGGTTAGGGCTTGTGTTAGAACTGGGGTTTCGGTTATGGTTA
GGACAATTAGGTCAGGTTTTGAGTTATTTTAGAGCTCATGTTGTGTCACC
GTCCAAATGAAGTCGCTGTTCACAACTTCGAACTCAGCGCAACTGCAACT
TGACTCTCCGCCCCAAGAGGCCCTGTGTCTTGGCTCTTCTGGAGCCCTAA
TCCTGGTCCCTGGATTCATGCTCCTATCCAATTTGCGCGTGGCCTCGATG
ACCACTGTGGTTTGTGTCTATTTTGTTTTTTGTTTTCTTCCTGAAGACTT
CCTCCGACCAGGGACCAATGACCCTATGCCTGGACTCATCGGGAAGACCT
ATAAGGCCAGGGGGGGAAGGGTAGAGGTTGTGGGGAAGCCCTACGACCTG
GTATATGACAAGTGCTTCAGCATCTTGCAGGTGTGTTGGGGGTAGGGCTG
CTATTGTGATGTGAAGTTTGAAGTTTGGGACCCAGGCGGGAAGGGCGGAG
GTGGGGGGCAAGCCCAGACTGCAATAAAAGTTACGTCGCCGTCATGCAGG
TTTACTAGGGTTAGGACTAGGGATAGGTTGAGCGGTTTACATCGATATTT
TTGATTTTTTTTTTGTAAGCAGGGAGGATCGATCGATCGGCTTTGAGGGA
ACACGATGATAATAATACTCCCACTTCGGAGAACTAACAAGACCACACGA
CAAGTGTCGAAAACCAAGAAGACCCAGTATTCGAGGCCGGCCAAAGCAAA
GCTTTTGGTGTCCTGGGCGTCTCTGTGTCGTCTCCTGTTTTCGCCGCTTT
CGTTCGATTTCTTTCTTTCCCTAATTTCCCTTCGTGAGTATCTTTTTTGC
CGTAAGAGCGAGCGACTCCCAACTGTCTTGTGTATGTATTTTTACGTTTT
TTTTCCTGCTTTCGATGCAAGTATTGATTACGGTAGAGCCGACCCTTGTA
TCTGCTACGCTGTCCTATTACCACAGGCAAAGATTTGTAACGCGCCGGGG
TGGTTTGTGTGTGTGCCCTTCGTGCCCCGCCGCGCGGTTGCCCCACGCAG
ATGGACCCGTCTCAAGAGGACAAATCGTCCGTGTGCGCAGTTGGGGACTC
CTTGAGTCACGACATCCAGGGGGCTGTCAACAGCGGCCTGTCGTCGGTGT
TTATTGCCAGCGGAGTCCACTACGAGGAGCTCGGGGTGGAGCAGGGTTCT
CCTGAGATGCCCGACCCGTCCCTCTTCCCCCCCCTGTTTGCCAGCCACTT
GGAGGGCGGGGAAGCGCCGACTCACTCGACACCCTCCTTTAGGTGGTAGC
TCTGGAGCTGGTCTTCTTCTACCTCCTGTGGTGGTCGCATGGGGGAGTGT
GCTTGCCGGTCGTTGGATATGTAGATGTATGTCTACACAGCACGCCGTAA
CATACAACGCCGTACTAAGCAGGGATCCCTAGAAGGAGCGCAGGACAAGC
AACGTCTGTGCCTCGTTCGGACTTTTTTTCTTACAGAATCATGACTGCCT
GCTCCAGCAAGATTGCCCCGGAAGAATTCTCCCTGCTCTTGTGGCTGCGA
TTCCGTGCTCCCACGTGTAAAAGTTGATGATACCTTACTACCTCGCATAA
ATTAATTTGTGTACGCCCGACAAACAACAGTGGGTCGACATAGAGGGGCG
GTGAGCAATGGAGAGAGCGATTTTGTTTTGTTTTTAGGAGTTTCTTATTC
GTATTGTCACGGGCAGGAGTGCGGAAAAGGAAGCACCCCTTTTTCTGCAC
TTCTGACCGTGCATAGAGTAACTCCATAGTACTTATTGATGCACCATGAA
GTATTGATCATTGATCAGGAGGAAAAGATGGAGAAAAAGCTCGAGACGAA
CACAACCAAAGAGTGCCACGAGTGGTACCAAGGTCCCCCTCCGGTTCCAC
GCCCTTTTTGCAACCATTAGTAGGATATCCATTACTGTCAGAGACCCCTA
CCTCACCTACGATACGTGAGTCACATTTTCCAGATCGGTCTCTACCACGA
TAGGATAGTTCTGCCAGCATGACAGTCTTTACCGCTGTTCGCTCTAAAAA
CACAGAAATTTCTTAATTGAGTTTCAAAGGTAAAAATCGGTCTTCAC
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1112:17741..24087-

>mRNA_D-mesarthrocarpus_Contig1112.2.2 ID=mRNA_D-mesarthrocarpus_Contig1112.2.2|Name=mRNA_D-mesarthrocarpus_Contig1112.2.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=468bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1112:17741..24087- (Discosporangium mesarthrocarpum MT17_79)
ATGGAGGGTAGAGGTGCGGAGGAGGTGGAGGCCATCTTAGTCAAGGCGAG
GGAGAGAGGCATCCCCATGCTTGTCACCAATCCAGACTTCCTCCGACCAG
GGACCAATGACCCTATGCCTGGACTCATCGGGAAGACCTATAAGGCCAGG
GGGGGAAGGGTAGAGGTTGTGGGGAAGCCCTACGACCTGGTATATGACAA
GTGCTTCAGCATCTTGCAGATGGACCCGTCTCAAGAGGACAAATCGTCCG
TGTGCGCAGTTGGGGACTCCTTGAGTCACGACATCCAGGGGGCTGTCAAC
AGCGGCCTGTCGTCGGTGTTTATTGCCAGCGGAGTCCACTACGAGGAGCT
CGGGGTGGAGCAGGGTTCTCCTGAGATGCCCGACCCGTCCCTCTTCCCCC
CCCTGTTTGCCAGCCACTTGGAGGGCGGGGAAGCGCCGACTCACTCGACA
CCCTCCTTTAGGTGGTAG
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