mRNA_D-mesarthrocarpus_Contig1112.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1112.1.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 138 bits (347), Expect = 2.350e-32 Identity = 74/173 (42.77%), Postives = 97/173 (56.07%), Query Frame = 3
Query: 294 HTHSSVILFLQRFRVPYPFFVPLIEEVRQQGWLGSGGADAPDRPGIPEEAKVLSVLHILRRGTVLDVMFFIWGMSESTAWRVLHKFCECFSQHMFETCIGLLKSDEELRQTMEAYHRWGFTGAVGPI----ISWNKCPVVDNRSYKGKESFPTLAYEVTVDHSMRVFGATRVF 800
HT F FRVPYPFFV L+E VR + W +G +D R +P E KVL+ L IL RG V ++ + +S T H+FC+ F+ +++ + L + E+LR+ ME Y R GF GAVG I W CP R Y GKE PT+A++VTVDHS RV TR F
Sbjct: 124 HTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYV-YLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGF 295
BLAST of mRNA_D-mesarthrocarpus_Contig1112.1.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 129 bits (324), Expect = 2.830e-29 Identity = 69/168 (41.07%), Postives = 93/168 (55.36%), Query Frame = 3
Query: 318 FLQRFRVPYPFFVPLIEEVRQQGWLGSGGADAPDRPGIPEEAKVLSVLHILRRGTVLDVMFFIWGMSESTAWRVLHKFCECFSQHMFETCIGLLKSDEELRQTMEAYHRWGFTGAVGPI----ISWNKCPVVDNRSYKGKESFPTLAYEVTVDHSMRVFGATRVFRAQ 809
F + FR+PYPFFV L+ V+Q+ W +G DA R GIP + KVL+ L IL RG ++ + +S TA H+F F++ M+ I L D + ++ M Y R GF+GA G I W CP RSY GKE +PT+AY+VTVDH+ RV T F
Sbjct: 116 FRESFRLPYPFFVELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQ-KKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGS 282
BLAST of mRNA_D-mesarthrocarpus_Contig1112.1.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 127 bits (318), Expect = 1.350e-28 Identity = 69/169 (40.83%), Postives = 95/169 (56.21%), Query Frame = 3
Query: 318 FLQRFRVPYPFFVPLIEEVRQQGWLGSGGADAPDRPGIPEEAKVLSVLHILRRGTVLDVMFFIWGMSESTAWRVLHKFCECFSQHMFETCIGLLKSDE-ELRQTMEAYHRWGFTGAVGPI----ISWNKCPVVDNRSYKGKESFPTLAYEVTVDHSMRVFGATRVFRAQ 809
F + FRVPYPFF+ L+E V+++ W + DA R P E KVL+ L IL RG V ++ + MS T +V H+FCE F+ M++ I L + EL + M Y + GF GA+G I W++CP RSY GKE PT+ Y+VTV+H+ RV T F
Sbjct: 85 FREDFRVPYPFFLRLVELVKKKDWFATTQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGS 253
BLAST of mRNA_D-mesarthrocarpus_Contig1112.1.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE) HSP 1 Score: 124 bits (312), Expect = 2.530e-28 Identity = 82/218 (37.61%), Postives = 107/218 (49.08%), Query Frame = 3
Query: 234 TSQIWGIAMDEDAPRWSPNTHTHSSVILFLQRFRVPYPFFVPLIEEVRQQGWLGSGGADAPDRPGIPEEAKVLSVLHILRRGTVLDVMFFIWGMSESTAWRVLHKFCECFSQHMFETCIGLLKSDEELRQTMEAYHRWGFTGAVGPI----ISWNKCPVVDNRSYKGKESFPTLAYEVTVDHSMRVFGATRVFRAQG*G*G*G*YLIVDSGYHGVLTQ 875
TS W D D HT ++ +F +RFRVPYPFF L++ R + W G DA +R GIP E KVL +G D + + MSES A + HKFC + MF+ I L + L + M +H+ G TGA G I N CP RS+ GKE FPT+AYEVTVDH+ R T F G + DSG + + T+
Sbjct: 73 TSAWWEKLQDVDLA-----DHTTAAAKVFRERFRVPYPFFQELVKLSRAKRWFSPGEKDAANREGIPLELKVLG------KGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHI-YLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAG---GTNDKTTIRYDSGVNKIRTE 275
BLAST of mRNA_D-mesarthrocarpus_Contig1112.1.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 121 bits (303), Expect = 1.230e-26 Identity = 66/165 (40.00%), Postives = 90/165 (54.55%), Query Frame = 3
Query: 330 FRVPYPFFVPLIEEVRQQGWLGSGGADAPDRPGIPEEAKVLSVLHILRRGTVLDVMFFIWGMSESTAWRVLHKFCECFSQHMFETCIGLLKSDE-ELRQTMEAYHRWGFTGAVGPI----ISWNKCPVVDNRSYKGKESFPTLAYEVTVDHSMRVFGATRVFRAQ 809
FRVPY F+ L+ V+ + W + DA P E KVL+ L IL RG ++ + MS T + HKFC F++ M++ I L + +L M+ Y R GFTGAVG + I+W++CP RSY GKE FPT+AY+VTVDH+ R T F
Sbjct: 47 FRVPYTVFLRLVALVKSKNWFSTAVTDAVGWASHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGS 211
BLAST of mRNA_D-mesarthrocarpus_Contig1112.1.1 vs. uniprot
Match: A0A6H5K8I3_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I3_9PHAE) HSP 1 Score: 119 bits (299), Expect = 5.130e-26 Identity = 68/172 (39.53%), Postives = 93/172 (54.07%), Query Frame = 3
Query: 318 FLQRFRVPYPFFVPLIEEVRQQGWLGS-------GGADAPDRPGIPEEAKVLSVLHILRRGTVLDVMFFIWGMSESTAWRVLHKFCECFSQHMFETCIGLLKSDEELRQTMEAYHRWGFTGAVGPI----ISWNKCPVVDNRSYKGKESFPTLAYEVTVDHSMRVFGATRVF 800
F +RFRVPYPFF+ L++EV+ W G GG R IP E KVL+VL IL RG D + + GM E+T + HKF E F+ +F + + +++EL+ M+ Y G +GA+G + I W CP S+ GKE + TL + V V H MRV TR F
Sbjct: 87 FRRRFRVPYPFFLSLVDEVKAGNWPGFTTDEFELGGRGT--RRCIPVETKVLAVLRILGRGNYFDDVSEVTGMGEATVNHMFHKFTERFACEIFPVWVRM-PNEDELKDIMKTYDEVGMSGAMGSMDGTHIEWTLCPYSQRSSHIGKEGYATLVFNVAVSHDMRVLSCTRGF 255
BLAST of mRNA_D-mesarthrocarpus_Contig1112.1.1 vs. uniprot
Match: A0A6H5JRQ7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRQ7_9PHAE) HSP 1 Score: 109 bits (272), Expect = 8.370e-24 Identity = 62/161 (38.51%), Postives = 87/161 (54.04%), Query Frame = 3
Query: 318 FLQRFRVPYPFFVPLIEEVRQQGWLGS-------GGADAPDRPGIPEEAKVLSVLHILRRGTVLDVMFFIWGMSESTAWRVLHKFCECFSQHMFETCIGLLKSDEELRQTMEAYHRWGFTGAVGPI----ISWNKCPVVDNRSYKGKESFPTLAYEVTVDH 767
F +RFRVPYPFF+ L++EV+ W G GG R IP E KVL+VL IL RG D + + GM E+T + HKF E F++ F + + +++EL+ M+ Y G +GA+G + I W CP S+ GKE + TL + V V H
Sbjct: 87 FRRRFRVPYPFFLSLVDEVKAGNWPGFTTDEFELGGRGT--RRCIPVETKVLAVLRILGRGNYFDDVSEVTGMGEATVNHMFHKFTERFAREFFPVWVRM-PNEDELKDIMKTYDEVGMSGAMGSMDGTHIEWTLCPYSQRSSHIGKEGYATLVFNVAVSH 244
BLAST of mRNA_D-mesarthrocarpus_Contig1112.1.1 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE) HSP 1 Score: 111 bits (277), Expect = 1.240e-22 Identity = 68/173 (39.31%), Postives = 86/173 (49.71%), Query Frame = 3
Query: 294 HTHSSVILFLQRFRVPYPFFVPLIEEVRQQGWLGSGGADAPDRPGIPEEAKVLSVLHILRRGTVLDVMFFIWGMSESTAWRVLHKFCECFSQHMFETCIGLLKSDEELRQTMEAYHRWGFTGAVGPI----ISWNKCPVVDNRSYKGKESFPTLAYEVTVDHSMRVFGATRVF 800
HT ++ +F RFRVPYPFF L++ R + W G D +R GIP E K LR T ++ E HKFC F+ MF+ I LL + L + M +H+ G TGA G I WN CP RS+ GKE FPT+A EVTVDH+ R T F
Sbjct: 88 HTTAAATVFRGRFRVPYPFFQNLVKLSRAKRWFSPGEKDTANREGIPLELK-------LRTSTPVE--------DEQVDGTSNHKFCRHFAAEMFDEHIYLL-TGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGF 244
BLAST of mRNA_D-mesarthrocarpus_Contig1112.1.1 vs. uniprot
Match: A0A6H5KLF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLF8_9PHAE) HSP 1 Score: 109 bits (272), Expect = 1.450e-22 Identity = 64/172 (37.21%), Postives = 91/172 (52.91%), Query Frame = 3
Query: 318 FLQRFRVPYPFFVPLIEEVRQQGWLGS-------GGADAPDRPGIPEEAKVLSVLHILRRGTVLDVMFFIWGMSESTAWRVLHKFCECFSQHMFETCIGLLKSDEELRQTMEAYHRWGFTGAVGPI----ISWNKCPVVDNRSYKGKESFPTLAYEVTVDHSMRVFGATRVF 800
F +RFRVPYPFF+ L++ V+ W G GG R IP E + VL IL RG D + + GM E+T ++ HKF F++ F + + +++EL++ M+ Y G TGA+G + + W CP + S+ GKE + TL Y V V H MRV TR F
Sbjct: 53 FRRRFRVPYPFFLSLVDGVKAGKWPGFTTNEFELGGRGT--RRCIPVE---IDVLRILGRGNYFDDVSEVTGMGEATVNQLFHKFTGRFAREFFPVWVRM-PNEDELKEIMKTYDEVGMTGAMGSMDGTHLQWTVCPYSERSSHVGKEGYATLVYNVAVSHDMRVLSCTRGF 218
BLAST of mRNA_D-mesarthrocarpus_Contig1112.1.1 vs. uniprot
Match: A0A6H5K6N4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6N4_9PHAE) HSP 1 Score: 96.7 bits (239), Expect = 8.730e-20 Identity = 63/172 (36.63%), Postives = 81/172 (47.09%), Query Frame = 3
Query: 444 KVLSVLHILRRGTVLDVMFFIWGMSESTAWRVLHKFCECFSQHMFETCIGLLKSDEELRQTMEAYHRWGFTGAVGPI----ISWNKCPVVDNRSYKGKESFPTLAYEVTVDHSMRVF-----------------------GATRVFRAQG*G*G*G*YLIVDSGYHGVLTQG 878
+VL+ L L RG D + + MS+ A HKFC+ F+Q +FE I L + + M Y + G TGA+G I W CP RSY GKE FPT+AY+VTVDH+ R GA FR + G YLIVD+GYH V + G
Sbjct: 3 QVLTTLQTLGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQ-DEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGVHTIKTDAQYTKRTYKLRGADGTFRERK-----GCYLIVDNGYHEVNSLG 168 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1112.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1112.1.1 >prot_D-mesarthrocarpus_Contig1112.1.1 ID=prot_D-mesarthrocarpus_Contig1112.1.1|Name=mRNA_D-mesarthrocarpus_Contig1112.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=186bp MDEDAPRWSPNTHTHSSVILFLQRFRVPYPFFVPLIEEVRQQGWLGSGGAback to top mRNA from alignment at D-mesarthrocarpus_Contig1112:8253..9553- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1112.1.1 ID=mRNA_D-mesarthrocarpus_Contig1112.1.1|Name=mRNA_D-mesarthrocarpus_Contig1112.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1301bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1112:8253..9553- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1112:8253..9553- >mRNA_D-mesarthrocarpus_Contig1112.1.1 ID=mRNA_D-mesarthrocarpus_Contig1112.1.1|Name=mRNA_D-mesarthrocarpus_Contig1112.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=558bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1112:8253..9553- (Discosporangium mesarthrocarpum MT17_79)back to top |