mRNA_D-mesarthrocarpus_Contig11116.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig11116.1.1 vs. uniprot
Match: D7FVE1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE1_ECTSI) HSP 1 Score: 217 bits (553), Expect = 2.290e-68 Identity = 97/169 (57.40%), Postives = 130/169 (76.92%), Query Frame = 1
Query: 4 KNGYYLIEFKPTLGWNFREHLRGYSHWAYGDLDVLFGDLSFGWLEPQELQSFDIITFSFGDQSRAYLRGQLTVHKNTPEINSIWRRCPHLSDYPTRIKDYVTSRTFTLQSAEGCYSKVLALDKNIRVKFAVKVFSDISYSKDVENLREVIIGADAVVKACPVTKGRQGE 510
KN YY++EFKP LGW FRE+L+ Y+HWAYGDLDV FGDL+ GWLEP E++ +DIIT+SFGDQ RAYLRGQLTVHK+ ++N IWR CPHLS+Y RI+ + ++ + L+SAEGCYS L K+++ K+AVKVF+D+ K ++ EV+I D +VK CP +GR+G+
Sbjct: 28 KNPYYMVEFKPALGWVFREYLKDYTHWAYGDLDVFFGDLTKGWLEPSEMRDYDIITYSFGDQQRAYLRGQLTVHKSIHKVNHIWRGCPHLSNYYRRIERTMETKQYNLESAEGCYSMALMYSKDVKAKYAVKVFTDMPGGKQ-DDQEEVVITGDGLVKRCPQQQGRRGD 195
BLAST of mRNA_D-mesarthrocarpus_Contig11116.1.1 vs. uniprot
Match: A0A6H5JLL1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL1_9PHAE) HSP 1 Score: 216 bits (551), Expect = 2.400e-62 Identity = 96/169 (56.80%), Postives = 130/169 (76.92%), Query Frame = 1
Query: 4 KNGYYLIEFKPTLGWNFREHLRGYSHWAYGDLDVLFGDLSFGWLEPQELQSFDIITFSFGDQSRAYLRGQLTVHKNTPEINSIWRRCPHLSDYPTRIKDYVTSRTFTLQSAEGCYSKVLALDKNIRVKFAVKVFSDISYSKDVENLREVIIGADAVVKACPVTKGRQGE 510
KN YY++EFKP LGW FRE+++ Y+HWAYGDLDV FGDL+ GWLEP E++ +DIIT+SFGDQ RAYLRGQLTVHK+ ++N IWR CPHLS+Y RI+ + ++ + L+SAEGCYS L K+++ K+AVKVF+D+ K ++ EV+I D +VK CP +GR+G+
Sbjct: 275 KNPYYMVEFKPALGWVFREYIKDYTHWAYGDLDVFFGDLTKGWLEPSEMRDYDIITYSFGDQQRAYLRGQLTVHKSIHKVNHIWRDCPHLSNYYRRIERTMETKQYNLESAEGCYSMALMYSKDVKAKYAVKVFTDMPGGKQ-DDQEEVVITGDGLVKRCPQQQGRRGD 442
BLAST of mRNA_D-mesarthrocarpus_Contig11116.1.1 vs. uniprot
Match: D7G2Z3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z3_ECTSI) HSP 1 Score: 197 bits (500), Expect = 3.610e-55 Identity = 92/163 (56.44%), Postives = 116/163 (71.17%), Query Frame = 1
Query: 13 YYLIEFKPTLGWNFREHLRGYSHWAYGDLDVLFGDLSFGWLEPQELQSFDIITFSFGDQSRAYLRGQLTVHKNTPEINSIWRRCPHLSDYPTRIKDYVTSRTFTLQSAEGCYSKVLALDKNIRVKFAVKVFSDISYSKDVENL-----REVIIGADAVVKACP 486
Y+++EFKP GW FRE+L YSHWA+GDLDVLFGD+ GWLEP ELQ FDIITFSFGDQ RAYLRGQLT+HKN ++N +WRRC HL++Y R++ + + L+SAEGCYS A D ++R+KF VK SD+ +D E + REVII +V CP
Sbjct: 412 YFIVEFKPAFGWLFREYLTEYSHWAFGDLDVLFGDMRRGWLEPTELQDFDIITFSFGDQYRAYLRGQLTIHKNKADVNRVWRRCSHLTNYSERLEAFRVNHGLPLESAEGCYSLAAASDPSLRIKFTVKALSDVD-QEDEEAVAQKRGREVIIDGHGLVTLCP 573
BLAST of mRNA_D-mesarthrocarpus_Contig11116.1.1 vs. uniprot
Match: A0A448ZCW1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZCW1_9STRA) HSP 1 Score: 157 bits (397), Expect = 2.390e-41 Identity = 72/139 (51.80%), Postives = 97/139 (69.78%), Query Frame = 1
Query: 4 KNGYYLIEFKPTLGWNFREHLRGYSHWAYGDLDVLFGDLSFGWLEPQELQSFDIITFSFGDQSRAYLRGQLTVHKNTPE-INSIWRRCPHLSDYPTRIKDYVTSRT-FTLQSAEGCYSKVLALDKNIRVKFAVKVFSDI 414
K Y ++EFKP LG F E L GYSHW Y DLD+LFGDL W+ P EL FDI+T+ FGDQ + YLRGQ T H+N PE IN +WR+C +LS TR ++++ + +L+SAEGCYS+ + +I+VK+AVK F+D+
Sbjct: 188 KYPYVMVEFKPALGHVFEEFLEGYSHWGYSDLDILFGDLE-RWITPDELNDFDIVTYGFGDQDKVYLRGQFTFHRNDPERINQLWRKCDYLSHMDTRFANFLSGKEKLSLESAEGCYSEAILNTDDIKVKYAVKAFTDV 325
BLAST of mRNA_D-mesarthrocarpus_Contig11116.1.1 vs. uniprot
Match: B7FVG7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FVG7_PHATC) HSP 1 Score: 154 bits (390), Expect = 2.050e-40 Identity = 70/134 (52.24%), Postives = 93/134 (69.40%), Query Frame = 1
Query: 13 YYLIEFKPTLGWNFREHLRGYSHWAYGDLDVLFGDLSFGWLEPQELQSFDIITFSFGDQSRAYLRGQLTVHKNTPEINSIWRRCPHLSDYPTRIKDYVTSRT-FTLQSAEGCYSKVLALDKNIRVKFAVKVFSD 411
Y L+EFKP LG+ F+E+L YSHW Y DLD+LFGDLS W+ P EL FD++T+ FGDQ R Y RGQ T H+NTP +N++WR+C +LS R ++ + F +SAEGCYS L +IRVK+AVK ++D
Sbjct: 163 YALVEFKPALGYIFQEYLESYSHWGYSDLDMLFGDLS-RWITPDELTEFDVVTYGFGDQHRLYARGQFTFHRNTPRVNTLWRKCEYLSRMDQRFAKILSEKKKFKFESAEGCYSVALLQHYDIRVKYAVKAWTD 295
BLAST of mRNA_D-mesarthrocarpus_Contig11116.1.1 vs. uniprot
Match: A0A835Z713_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z713_9STRA) HSP 1 Score: 148 bits (374), Expect = 2.270e-40 Identity = 66/142 (46.48%), Postives = 93/142 (65.49%), Query Frame = 1
Query: 1 MKNGYYLIEFKPTLGWNFREHLRGYSHWAYGDLDVLFGDLSFGWLEPQELQSFDIITFSFGDQSRAYLRGQLTVHKNTPEINSIWRRCPHLSDYPTRIKDYVTSRTFTLQSAEGCYSKVLALDKNIRVKFAVKVFSDISYSK 426
+K+ Y+L+EFKP LGW R++L Y+HW +GD+D++FG L+ GWL +EL +D I+FSFGDQ RAYLRGQLT+ KNTP+ N++WR C H S Y RI+ S EGC S L ++V V+ SD+++ +
Sbjct: 206 VKHPYWLVEFKPVLGWILRDYLINYTHWGFGDMDIIFGHLANGWLPAEELNQWDFISFSFGDQYRAYLRGQLTIQKNTPKANNVWRLCKHFSQYMQRIRQEPPWGPLMRFSGEGCCSWATRLVPGLKVLIPVRAGSDVAHKE 347
BLAST of mRNA_D-mesarthrocarpus_Contig11116.1.1 vs. uniprot
Match: A0A1E7F5F1_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F5F1_9STRA) HSP 1 Score: 150 bits (378), Expect = 8.720e-39 Identity = 69/140 (49.29%), Postives = 93/140 (66.43%), Query Frame = 1
Query: 13 YYLIEFKPTLGWNFREHLRGYSHWAYGDLDVLFGDLSFGWLEPQELQSFDIITFSFGDQSRAYLRGQLTVHKNTPE-INSIWRRCPHLSDYPTRIKDYVTSR-TFTLQSAEGCYSKVLALDKNIRVKFAVKVFSDISYSK 426
Y ++EFKP LG F+ +L GY+HW Y DLD++FGDL W+ P EL FDI+T+ FGDQ R YLRGQ T+H+N PE IN +WR C +LS TR + ++ T +SAEGCYS + +I++K+AVK F+D K
Sbjct: 171 YVMVEFKPALGHIFQHYLDGYTHWGYSDLDIMFGDLE-RWITPDELTEFDIVTYGFGDQHRVYLRGQFTIHRNDPEKINQLWRPCDYLSHMDTRFEQVLSKEETLHFESAEGCYSAAVLERDDIKIKYAVKAFTDAEQEK 309
BLAST of mRNA_D-mesarthrocarpus_Contig11116.1.1 vs. uniprot
Match: A0A7S2LG80_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LG80_9STRA) HSP 1 Score: 140 bits (353), Expect = 4.190e-38 Identity = 64/135 (47.41%), Postives = 91/135 (67.41%), Query Frame = 1
Query: 13 YYLIEFKPTLGWNFREHLRGYSHWAYGDLDVLFGDLSFGWLEPQELQSFDIITFSFGDQSRAYLRGQLTVHKNTPE-INSIWRRCPHLSDYPTRIKDYVTSRTFTLQSAEGCYSKVLALDKNIRVKFAVKVFSDI 414
Y L+E+KP G F ++L YSHW Y D+DV+FGD++ W++ E +DI+T+ FGDQ + YLRGQ T HKN P+ IN +WR C +LS+ R + S +SAEGCYS+ + + K+I+VK+AVK FSD+
Sbjct: 31 YILVEYKPAFGHIFADYLTSYSHWGYSDIDVVFGDMT-RWIDTDEWNDYDIVTYGFGDQDKLYLRGQFTFHKNDPKVINQMWRHCKYLSEMDIRYSEKNASER-KFESAEGCYSQAVIMRKDIKVKWAVKAFSDV 163
BLAST of mRNA_D-mesarthrocarpus_Contig11116.1.1 vs. uniprot
Match: A0A1Z5JIW8_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIW8_FISSO) HSP 1 Score: 142 bits (358), Expect = 4.230e-36 Identity = 69/135 (51.11%), Postives = 94/135 (69.63%), Query Frame = 1
Query: 13 YYLIEFKPTLGWNFREHLRGYSHWAYGDLDVLFGDLSFGWLEPQELQSFDIITFSFGDQSRAYLRGQLTVHKNTPEINSIWRRCPHLSDYPTRIKDYVTSRT-FTLQSAEGCYSKVLALDKN-IRVKFAVKVFSD 411
Y L+EFKP LG+ F++ L GYSHW Y DLD++FGDLS W+ EL ++DI+T+S+GDQ R YLRGQ T HKN ++N+IWR C +L D R V S+ F ++SAEGCYS + LD+N +RVK+ ++D
Sbjct: 135 YALVEFKPALGYIFQDLLEGYSHWGYTDLDIVFGDLSH-WITEDELLNYDIVTYSYGDQRRLYLRGQFTFHKNNDKVNNIWRYCRYLRDLDERFDSIVKSKGHFRVESAEGCYSAAV-LDRNDVRVKYVPHAWTD 267
BLAST of mRNA_D-mesarthrocarpus_Contig11116.1.1 vs. uniprot
Match: B8LBM2_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LBM2_THAPS) HSP 1 Score: 139 bits (350), Expect = 5.080e-35 Identity = 65/136 (47.79%), Postives = 89/136 (65.44%), Query Frame = 1
Query: 13 YYLIEFKPTLGWNFREHLRGYSHWAYGDLDVLFGDLSFGWLEPQELQSFDIITFSFGDQSRAYLRGQLTVHKNTPE-INSIWRRCPHLSDYPTRIKDYVTSRTFTLQSAEGCYSKVLALDKNIRVKFAVKVFSDIS 417
Y L+E+KP G F ++L+GYSHW Y DLDV+FGDL+ W+ E +DI+T+ FGDQ + YLRGQ T H+N IN +WR C +LS+ R Y +SAEGCYS+ + +++RVK+AVK FSD+S
Sbjct: 19 YILVEYKPAFGHIFADYLKGYSHWGYSDLDVVFGDLN-RWITDDEWNDYDIVTYGFGDQDKLYLRGQFTFHRNDAAYINQLWRGCKYLSEMDVR---YAHPDKLKFESAEGCYSQAVIRKEDVRVKYAVKAFSDVS 150 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig11116.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig11116.1.1 >prot_D-mesarthrocarpus_Contig11116.1.1 ID=prot_D-mesarthrocarpus_Contig11116.1.1|Name=mRNA_D-mesarthrocarpus_Contig11116.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=171bp MKNGYYLIEFKPTLGWNFREHLRGYSHWAYGDLDVLFGDLSFGWLEPQELback to top mRNA from alignment at D-mesarthrocarpus_Contig11116:482..3771- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig11116.1.1 ID=mRNA_D-mesarthrocarpus_Contig11116.1.1|Name=mRNA_D-mesarthrocarpus_Contig11116.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3290bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11116:482..3771- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig11116:482..3771- >mRNA_D-mesarthrocarpus_Contig11116.1.1 ID=mRNA_D-mesarthrocarpus_Contig11116.1.1|Name=mRNA_D-mesarthrocarpus_Contig11116.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=513bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11116:482..3771- (Discosporangium mesarthrocarpum MT17_79)back to top |