mRNA_D-mesarthrocarpus_Contig11107.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig11107.1.1 vs. uniprot
Match: D8LF93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF93_ECTSI) HSP 1 Score: 276 bits (705), Expect = 1.860e-82 Identity = 134/193 (69.43%), Postives = 160/193 (82.90%), Query Frame = 1
Query: 1 GVDASLLRLYAPILWRSLKVANPVVRRQACQVLVAAFPLQDPLAGAAAYDQVLQKQFDALTTLLEDGYPSVRAVAAKGVCQVLAVYWEMLPLPTTRGLLSRVMGRLALDASSPMVRLAATEGLSDLLDCPHSHGVLKAMLPGVSNLVHDSNKRVKVAFIGLLQKVKGIRAIKFYHVVPVDHLLARLAEDHNRC 579
GVDA LLRLY P++WRSL+VANP VR QACQVLV AFPLQDP AGAA+YD LQ+QF ALT LLED +P VRAVA KG C+VL+V+WEM+PL TTR LL+RV+GRLA D SSP VRLAA EGLS LL+CP SH VLK+MLPGV NL+HD+NK+V+ AF+ LL VKG+++IK+Y V VDH+LARL+ED +C
Sbjct: 396 GVDADLLRLYGPVMWRSLRVANPSVRAQACQVLVDAFPLQDPSAGAASYDATLQQQFVALTDLLEDAHPQVRAVAGKGACRVLSVFWEMVPLDTTRALLTRVVGRLASDGSSPAVRLAAVEGLSVLLECPASHAVLKSMLPGVQNLIHDTNKKVRTAFVKLLLVVKGVKSIKYYQVATVDHILARLSEDDAKC 588
BLAST of mRNA_D-mesarthrocarpus_Contig11107.1.1 vs. uniprot
Match: A0A6H5JG90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG90_9PHAE) HSP 1 Score: 237 bits (604), Expect = 8.320e-69 Identity = 123/200 (61.50%), Postives = 150/200 (75.00%), Query Frame = 1
Query: 1 GVDASLLRLYAPILWRSLKVANPVVRRQACQVLVAAFPLQDPLAGAAAYDQVLQKQFDALTTLLEDGYPSVRAVAAKGVCQVLAVYWEMLPLPTTRGLLSRVMGRLALDASSPMVRLAATEGLSDLLDCPHSHGVLKAMLP-------GVSNLVHDSNKRVKVAFIGLLQKVKGIRAIKFYHVVPVDHLLARLAEDHNRC 579
GVDA LLRLY P++WRSL+VANP VR Q L++ GAAAYD LQ+QF ALT LLED +P VRAVA KG C+VL+V+WEM+PL TTR LL+RV+GRLA D SSP VRLAA EGLS LL+CP SH VLK+MLP GV NL+HD+NK+V+ AF+ LL VKG+++IK+Y V VDH+LARL+EDH +C
Sbjct: 269 GVDADLLRLYGPVMWRSLRVANPSVRAQG--YLLSG-------VGAAAYDATLQQQFVALTDLLEDAHPQVRAVAGKGACRVLSVFWEMVPLDTTRALLTRVVGRLASDGSSPAVRLAAVEGLSVLLECPASHAVLKSMLPVSVSEEGGVQNLIHDTNKKVRTAFVKLLLVVKGVKSIKYYQVATVDHILARLSEDHAKC 459
BLAST of mRNA_D-mesarthrocarpus_Contig11107.1.1 vs. uniprot
Match: A0A7S1CM40_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CM40_9STRA) HSP 1 Score: 202 bits (515), Expect = 4.770e-60 Identity = 103/189 (54.50%), Postives = 130/189 (68.78%), Query Frame = 1
Query: 1 GVDASLLRLYAPILWRSLKVANPVVRRQACQVLVAAFPLQDPLAGAAAYDQVLQKQFDALTTLLEDGYPSVRAVAAKGVCQVLAVYWEMLPLPTTRGLLSRVMGRLALDASSPMVRLAATEGLSDLLDCPHSHGVLKAMLPGVSNLVHDSNKRVKVAFIGLLQKVKGIRAIKFYHVVPVDHLLARLAED 567
GVD L RLY PILWRSL ANP VRR A LV AFPLQ+P A D LQKQFDAL LL D P+VR VA GVC+VL V+WE++P T LL+R++G LA D S VR A EGL +LDC SH +LK +LP ++ L+HD ++RV+ AF+ LLQ+V +R+I+F+ VV +DH++ARLA D
Sbjct: 198 GVDEMLDRLYEPILWRSLAAANPTVRRNAATALVDAFPLQNPEAARPVVDASLQKQFDALGALLSDPVPNVRVVAVHGVCKVLGVFWELIPAATAHALLARLVGELAHDVRSSAVRAAVFEGLDYVLDCGLSHPMLKPLLPALAPLLHDRSERVRAAFVALLQRVSKVRSIRFFDVVHIDHVMARLAMD 386
BLAST of mRNA_D-mesarthrocarpus_Contig11107.1.1 vs. uniprot
Match: W7TM42_9STRA (Condensin-2 complex subunit g2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM42_9STRA) HSP 1 Score: 206 bits (524), Expect = 4.920e-58 Identity = 106/188 (56.38%), Postives = 133/188 (70.74%), Query Frame = 1
Query: 4 VDASLLRLYAPILWRSLKVANPVVRRQACQVLVAAFPLQDPLAGAAAYDQVLQKQFDALTTLLEDGYPSVRAVAAKGVCQVLAVYWEMLPLPTTRGLLSRVMGRLALDASSPMVRLAATEGLSDLLDCPHSHGVLKAMLPGVSNLVHDSNKRVKVAFIGLLQKVKGIRAIKFYHVVPVDHLLARLAED 567
VDA LLRLY PILWRSL+VA+P VR QA +LV AFPLQDP G +LQ+Q D L +LL D P VR A GVC+VL+++WE +PL T+ ++R++G LA DASS +VRL+ EGL LL+ P +H VLK+ LP + L+ D RV+ AF+GLLQKVK +R IKFY VVPV+HLLAR A D
Sbjct: 349 VDAMLLRLYDPILWRSLRVASPTVRAQATSLLVDAFPLQDPDMGTIEAAALLQRQLDVLQSLLLDPAPHVRVTAVAGVCRVLSLFWEAIPLQVTKAYVTRLVGSLAFDASSALVRLSVVEGLQQLLEQPLAHPVLKSALPLTAPLLQDKTPRVRAAFVGLLQKVKSVRDIKFYEVVPVEHLLARFATD 536
BLAST of mRNA_D-mesarthrocarpus_Contig11107.1.1 vs. uniprot
Match: A0A1S3HII7_LINUN (condensin-2 complex subunit G2 n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HII7_LINUN) HSP 1 Score: 196 bits (498), Expect = 1.480e-54 Identity = 100/189 (52.91%), Postives = 135/189 (71.43%), Query Frame = 1
Query: 1 GVDASLLRLYAPILWRSLKVANPVVRRQACQVLVAAFPLQDPLAGAAAYDQVLQKQFDALTTLLEDGYPSVRAVAAKGVCQVLAVYWEMLPLPTTRGLLSRVMGRLALDASSPMVRLAATEGLSDLLDCPHSHGVLKAMLPGVSNLVHDSNKRVKVAFIGLLQKVKGIRAIKFYHVVPVDHLLARLAED 567
GVD LLRLY PILWRSLKVAN VR A +++ AFPLQ+P D+++QKQFD L TLLED P VRA GVC++ +WE++P T GL+ ++ LA DA+S VR+A +GL+ LLD SH + K +LPG+SNL+HD++++V+VAF+ +L KVKG+RAIKF+ +VP++HLLARL D
Sbjct: 312 GVDEMLLRLYEPILWRSLKVANGNVRANAAALMIDAFPLQNPEDNVEEIDRLMQKQFDMLQTLLEDPCPVVRATTIHGVCRICCTFWELIPSQTIAGLVQSLVQDLAWDAASSDVRVAVLKGLTFLLDNHLSHPLFKTVLPGLSNLLHDTSEKVRVAFMEMLLKVKGMRAIKFWTIVPMEHLLARLEID 500
BLAST of mRNA_D-mesarthrocarpus_Contig11107.1.1 vs. uniprot
Match: A0A2R5GJ73_9STRA (Condensin-2 complex subunit G2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJ73_9STRA) HSP 1 Score: 194 bits (493), Expect = 6.250e-54 Identity = 103/189 (54.50%), Postives = 128/189 (67.72%), Query Frame = 1
Query: 1 GVDASLLRLYAPILWRSLKVANPVVRRQACQVLVAAFPLQDPLAGAAAYDQVLQKQFDALTTLLEDGYPSVRAVAAKGVCQVLAVYWEMLPLPTTRGLLSRVMGRLALDASSPMVRLAATEGLSDLLDCPHSHGVLKAMLPGVSNLVHDSNKRVKVAFIGLLQKVKGIRAIKFYHVVPVDHLLARLAED 567
GVDA LLRLY PILWR+L VANP VR A ++L AFPLQDP A A DQVLQKQF A+ TLL D P VR A +G C++L+V+WE++P T LLS ++G L D +SP VR+A GL + + P + G L +LP S L+HD +K+V+ A + LL +VK IR IKFY VV VDHLL RLA D
Sbjct: 373 GVDAMLLRLYNPILWRALNVANPSVRFNATRLLARAFPLQDPDASVAETDQVLQKQFAAIETLLRDVCPRVRVAAVQGACRMLSVFWELIPKKATVSLLSTLVGDLLRDTNSPEVRVAVLRGLEFISENPLAQGALHDVLPHTSPLIHDHSKQVRNALLSLLIRVKSIRTIKFYEVVQVDHLLERLAMD 561
BLAST of mRNA_D-mesarthrocarpus_Contig11107.1.1 vs. uniprot
Match: A0A2G8JV81_STIJA (Putative condensin-2 complex subunit G2 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JV81_STIJA) HSP 1 Score: 181 bits (459), Expect = 1.920e-53 Identity = 92/186 (49.46%), Postives = 125/186 (67.20%), Query Frame = 1
Query: 1 GVDASLLRLYAPILWRSLKVANPVVRRQACQVLVAAFPLQDPLAGAAAYDQVLQKQFDALTTLLEDGYPSVRAVAAKGVCQVLAVYWEMLPLPTTRGLLSRVMGRLALDASSPMVRLAATEGLSDLLDCPHSHGVLKAMLPGVSNLVHDSNKRVKVAFIGLLQKVKGIRAIKFYHVVPVDHLLARL 558
GVD L LY PILWR+L ANP VR A +L+ AFPLQDP + + D +LQKQ DAL TLL D P+VR A +GVC+V++VYWE+LP L++++ D SSP VR+A +GL +LD P SH +LK LP + + +HD++++V ++F+ LL KVKGIR IK +V ++HLLARL
Sbjct: 75 GVDKMLCTLYEPILWRALNAANPGVRVNAAYLLIDAFPLQDPESNKESMDAILQKQIDALNTLLCDPCPTVRVTAVQGVCKVVSVYWELLPAAAVSSFLAKLIQDQVYDTSSPDVRVAVFKGLKYILDNPLSHPLLKHTLPSLGDFIHDTSEKVIISFLELLLKVKGIRTIKVSSIVSMEHLLARL 260
BLAST of mRNA_D-mesarthrocarpus_Contig11107.1.1 vs. uniprot
Match: L8GEA4_ACACA (HEAT repeat domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GEA4_ACACA) HSP 1 Score: 192 bits (487), Expect = 4.580e-53 Identity = 101/189 (53.44%), Postives = 130/189 (68.78%), Query Frame = 1
Query: 1 GVDASLLRLYAPILWRSLKVANPVVRRQACQVLVAAFPLQDPLAGAAAYDQVLQKQFDALTTLLEDGYPSVRAVAAKGVCQVLAVYWEMLPLPTTRGLLSRVMGRLALDASSPMVRLAATEGLSDLLDCPHSHGVLKAMLPGVSNLVHDSNKRVKVAFIGLLQKVKGIRAIKFYHVVPVDHLLARLAED 567
GVD LLRLY PI+WRSLKVANP+VRR A +L AFPLQDP + D++LQKQF+ LL D P VR VA + VC++L V+WE++P T R LL++++ A D SS VR A EGL LLD S VLK LP ++ L+HD+ +RV+VAFI LL ++K IRAI+FY +VP++HLL RL D
Sbjct: 383 GVDEMLLRLYEPIIWRSLKVANPMVRRNATVLLADAFPLQDPDSAQRETDELLQKQFNQFEALLTDDVPVVRCVAVQAVCRILGVFWELIPAATIRTLLTKLINDSARDKSSSAVRQAVFEGLRYLLDNHLSQPVLKTHLPQLAPLIHDTAERVRVAFIDLLCEIKTIRAIRFYDIVPIEHLLTRLELD 571
BLAST of mRNA_D-mesarthrocarpus_Contig11107.1.1 vs. uniprot
Match: A7RGR0_NEMVE (Predicted protein n=3 Tax=Nematostella vectensis TaxID=45351 RepID=A7RGR0_NEMVE) HSP 1 Score: 191 bits (486), Expect = 6.260e-53 Identity = 95/186 (51.08%), Postives = 134/186 (72.04%), Query Frame = 1
Query: 1 GVDASLLRLYAPILWRSLKVANPVVRRQACQVLVAAFPLQDPLAGAAAYDQVLQKQFDALTTLLEDGYPSVRAVAAKGVCQVLAVYWEMLPLPTTRGLLSRVMGRLALDASSPMVRLAATEGLSDLLDCPHSHGVLKAMLPGVSNLVHDSNKRVKVAFIGLLQKVKGIRAIKFYHVVPVDHLLARL 558
GVD +L+RLY PILWR+ KVANP+VR A +LV AFPLQ+P A D +LQKQFD L LLED P VRA GVC++ V+WE++P+ T + L++R++ +A DA+S VR+A +GL L++ SH +LK +L + +LVHD++++V+ AF+ LL VKG++AIKF+ +VP+DHLLARL
Sbjct: 406 GVDEALVRLYQPILWRAFKVANPLVRANAAAILVDAFPLQNPDANNEEIDALLQKQFDLLQELLEDPSPIVRATGVHGVCRIAGVFWELIPVHTVKSLITRLITSVAFDATSSSVRVAVFQGLKFLVENHLSHPLLKNLLGSLRDLVHDTSEKVRAAFVDLLLLVKGMKAIKFWTIVPLDHLLARL 591
BLAST of mRNA_D-mesarthrocarpus_Contig11107.1.1 vs. uniprot
Match: A0A6P8HAI6_ACTTE (condensin-2 complex subunit G2-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HAI6_ACTTE) HSP 1 Score: 191 bits (485), Expect = 8.290e-53 Identity = 94/186 (50.54%), Postives = 133/186 (71.51%), Query Frame = 1
Query: 1 GVDASLLRLYAPILWRSLKVANPVVRRQACQVLVAAFPLQDPLAGAAAYDQVLQKQFDALTTLLEDGYPSVRAVAAKGVCQVLAVYWEMLPLPTTRGLLSRVMGRLALDASSPMVRLAATEGLSDLLDCPHSHGVLKAMLPGVSNLVHDSNKRVKVAFIGLLQKVKGIRAIKFYHVVPVDHLLARL 558
GVD +L+RLY PI+WR+ KVANP+VR A +L+ AFPLQDP A D +LQKQFD L LLED P VRA GVC++ V+WE++P+ T + LL++++ +A DASS VR+A +GL LL+ SH LK +L + +L+HD++++V+ AF+ LL VKG++AIKF+ +VP++HLLARL
Sbjct: 315 GVDEALVRLYQPIIWRAFKVANPMVRANAAALLIDAFPLQDPDANNEEVDNLLQKQFDILQNLLEDPSPVVRATGVHGVCRIAGVFWELIPVTTLKTLLNKLICEVAFDASSSSVRVAVFQGLKFLLENHLSHLFLKTLLVSLRDLIHDNSEKVRAAFVDLLLLVKGMKAIKFWSIVPLEHLLARL 500 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig11107.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig11107.1.1 >prot_D-mesarthrocarpus_Contig11107.1.1 ID=prot_D-mesarthrocarpus_Contig11107.1.1|Name=mRNA_D-mesarthrocarpus_Contig11107.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=193bp GVDASLLRLYAPILWRSLKVANPVVRRQACQVLVAAFPLQDPLAGAAAYDback to top mRNA from alignment at D-mesarthrocarpus_Contig11107:20..2476- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig11107.1.1 ID=mRNA_D-mesarthrocarpus_Contig11107.1.1|Name=mRNA_D-mesarthrocarpus_Contig11107.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2457bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11107:20..2476- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig11107:20..2476- >mRNA_D-mesarthrocarpus_Contig11107.1.1 ID=mRNA_D-mesarthrocarpus_Contig11107.1.1|Name=mRNA_D-mesarthrocarpus_Contig11107.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=579bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11107:20..2476- (Discosporangium mesarthrocarpum MT17_79)back to top |