mRNA_D-mesarthrocarpus_Contig111.9.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig111.9.1
Unique NamemRNA_D-mesarthrocarpus_Contig111.9.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
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BLAST of mRNA_D-mesarthrocarpus_Contig111.9.1 vs. uniprot
Match: A0A7S2V1G2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1G2_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 6.310e-21
Identity = 40/63 (63.49%), Postives = 52/63 (82.54%), Query Frame = 1 
Query:    1 GWRLGWAIGPPALLRGLGKLHSSLTYCAATPLQYGLSEALGKEDGSFEGIPRLIEGNAAILAE 189
            GWR+GW +GPPAL++G+  LHS+ TYCA TPLQ+G+S+AL +EDG F+GIP LIE NA IL +
Sbjct:  298 GWRVGWILGPPALMQGVNMLHSATTYCAPTPLQHGISQALLQEDGQFDGIPALIERNAKILGK 360
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BLAST of mRNA_D-mesarthrocarpus_Contig111.9.1 vs. uniprot
Match: D7FQ50_ECTSI (Aspartate Aminotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ50_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 3.570e-20
Identity = 39/61 (63.93%), Postives = 50/61 (81.97%), Query Frame = 1 
Query:    1 GWRLGWAIGPPALLRGLGKLHSSLTYCAATPLQYGLSEALGKEDGSFEGIPRLIEGNAAIL 183
            GWR+GWA+  P LLRGL   H + +YCA +PLQ+GL+ ALG+EDGSFEGIP+L+EGNA +L
Sbjct:  262 GWRVGWALSTPELLRGLAVYHCNTSYCAPSPLQHGLAVALGEEDGSFEGIPQLVEGNAELL 322
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BLAST of mRNA_D-mesarthrocarpus_Contig111.9.1 vs. uniprot
Match: A0A097IUS9_SCYLO (Aspartate aminotransferase n=3 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A097IUS9_SCYLO)

HSP 1 Score: 87.4 bits (215), Expect = 9.140e-19
Identity = 37/61 (60.66%), Postives = 48/61 (78.69%), Query Frame = 1 
Query:    1 GWRLGWAIGPPALLRGLGKLHSSLTYCAATPLQYGLSEALGKEDGSFEGIPRLIEGNAAIL 183
            GWR+GWA+  P LL+GL   H + +YCA +PLQ+GL+ ALG EDGSFEGIP+L+ GNA +L
Sbjct:  264 GWRVGWALSTPGLLKGLAVYHGNTSYCAPSPLQHGLAVALGVEDGSFEGIPKLVGGNAELL 324
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BLAST of mRNA_D-mesarthrocarpus_Contig111.9.1 vs. uniprot
Match: A0A097IUU4_9PHAE (Aspartate aminotransferase n=7 Tax=Sargassum TaxID=3015 RepID=A0A097IUU4_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 3.380e-18
Identity = 37/61 (60.66%), Postives = 47/61 (77.05%), Query Frame = 1 
Query:    1 GWRLGWAIGPPALLRGLGKLHSSLTYCAATPLQYGLSEALGKEDGSFEGIPRLIEGNAAIL 183
            GWR+GWA+  P LL+GL   H   +YCA TPLQ+GL+ AL  EDG+FEGIP+L+EGNA +L
Sbjct:  264 GWRVGWALSTPELLKGLNVSHCMTSYCAPTPLQHGLAVALEAEDGTFEGIPKLVEGNAELL 324
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BLAST of mRNA_D-mesarthrocarpus_Contig111.9.1 vs. uniprot
Match: A0A097IUQ5_9PHAE (Aspartate aminotransferase n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A097IUQ5_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 3.420e-18
Identity = 36/63 (57.14%), Postives = 49/63 (77.78%), Query Frame = 1 
Query:    1 GWRLGWAIGPPALLRGLGKLHSSLTYCAATPLQYGLSEALGKEDGSFEGIPRLIEGNAAILAE 189
            GWR+GWA+  P+LL+GL   H + +YCA +PLQ+GL+ AL  EDGSFE IP+L+EGNA +L +
Sbjct:  266 GWRVGWALSTPSLLKGLAVYHVATSYCAPSPLQHGLAVALDAEDGSFEDIPKLVEGNALVLGD 328
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BLAST of mRNA_D-mesarthrocarpus_Contig111.9.1 vs. uniprot
Match: A0A097IUT3_UNDPI (Aspartate aminotransferase n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=A0A097IUT3_UNDPI)

HSP 1 Score: 83.6 bits (205), Expect = 2.350e-17
Identity = 36/63 (57.14%), Postives = 46/63 (73.02%), Query Frame = 1 
Query:    1 GWRLGWAIGPPALLRGLGKLHSSLTYCAATPLQYGLSEALGKEDGSFEGIPRLIEGNAAILAE 189
            GWR+GWA+  P LL GL   H + +YCA +PLQ+GLS AL  EDG FE IP+L+EGNA +L +
Sbjct:  269 GWRIGWALSTPELLEGLSVYHGNTSYCAPSPLQHGLSVALEAEDGLFEDIPKLVEGNALLLGD 331
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BLAST of mRNA_D-mesarthrocarpus_Contig111.9.1 vs. uniprot
Match: A0A097IUU6_9PHAE (Aspartate aminotransferase n=1 Tax=Saccharina sculpera TaxID=416830 RepID=A0A097IUU6_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 2.380e-17
Identity = 35/63 (55.56%), Postives = 48/63 (76.19%), Query Frame = 1 
Query:    1 GWRLGWAIGPPALLRGLGKLHSSLTYCAATPLQYGLSEALGKEDGSFEGIPRLIEGNAAILAE 189
            GWR+GWA+  P +L+GL   H + +YCA +PLQ+GLS AL  EDGSFE +P+L+EGNA +L +
Sbjct:  273 GWRVGWALSTPEVLKGLAVYHHNTSYCAPSPLQHGLSVALEAEDGSFEDMPKLVEGNALLLGD 335
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BLAST of mRNA_D-mesarthrocarpus_Contig111.9.1 vs. uniprot
Match: A0A097IUV4_9PHAE (Aspartate aminotransferase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A097IUV4_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 3.220e-17
Identity = 35/63 (55.56%), Postives = 50/63 (79.37%), Query Frame = 1 
Query:    1 GWRLGWAIGPPALLRGLGKLHSSLTYCAATPLQYGLSEALGKEDGSFEGIPRLIEGNAAILAE 189
            GWR+GWA+  PALL+G+   H +++YCA +PLQ+GL+ AL  EDG+FEGIP+++E NA IL +
Sbjct:  267 GWRVGWALSTPALLKGVMVHHMNMSYCAPSPLQHGLAVALEAEDGTFEGIPKIVEENARILGD 329
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BLAST of mRNA_D-mesarthrocarpus_Contig111.9.1 vs. uniprot
Match: A0A388JZ52_CHABU (Aminotran_1_2 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JZ52_CHABU)

HSP 1 Score: 74.3 bits (181), Expect = 4.810e-14
Identity = 32/61 (52.46%), Postives = 42/61 (68.85%), Query Frame = 1 
Query:    1 GWRLGWAIGPPALLRGLGKLHSSLTYCAATPLQYGLSEALGKEDGSFEGIPRLIEGNAAIL 183
            GWR+GWA+GPP L+R +  +H   T CA  PLQ+G+  AL  EDGSF G+ +L  G+ AIL
Sbjct:  297 GWRVGWAVGPPQLIRAIDMVHQHSTVCAPVPLQHGIGAALDAEDGSFGGVVQLHAGSYAIL 357
[Close]
BLAST of mRNA_D-mesarthrocarpus_Contig111.9.1 vs. uniprot
Match: A0A7S1XAJ8_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1XAJ8_9CHLO)

HSP 1 Score: 69.3 bits (168), Expect = 2.750e-12
Identity = 30/63 (47.62%), Postives = 41/63 (65.08%), Query Frame = 1 
Query:    1 GWRLGWAIGPPALLRGLGKLHSSLTYCAATPLQYGLSEALGKEDGSFEGIPRLIEGNAAILAE 189
            GWR+GW  GP  L+  L  +H+  T+CA TPLQYG++EAL  EDGSF+  P  +   A +L +
Sbjct:  259 GWRVGWVTGPQELISALRIVHAYSTFCAPTPLQYGVAEALKAEDGSFDNTPERMAETAKMLCD 321
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig111.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2V1G2_9STRA6.310e-2163.49Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D7FQ50_ECTSI3.570e-2063.93Aspartate Aminotransferase n=1 Tax=Ectocarpus sili... [more]
A0A097IUS9_SCYLO9.140e-1960.66Aspartate aminotransferase n=3 Tax=Scytosiphonacea... [more]
A0A097IUU4_9PHAE3.380e-1860.66Aspartate aminotransferase n=7 Tax=Sargassum TaxID... [more]
A0A097IUQ5_9PHAE3.420e-1857.14Aspartate aminotransferase n=1 Tax=Desmarestia vir... [more]
A0A097IUT3_UNDPI2.350e-1757.14Aspartate aminotransferase n=1 Tax=Undaria pinnati... [more]
A0A097IUU6_9PHAE2.380e-1755.56Aspartate aminotransferase n=1 Tax=Saccharina scul... [more]
A0A097IUV4_9PHAE3.220e-1755.56Aspartate aminotransferase n=1 Tax=Dictyopteris un... [more]
A0A388JZ52_CHABU4.810e-1452.46Aminotran_1_2 domain-containing protein n=1 Tax=Ch... [more]
A0A7S1XAJ8_9CHLO2.750e-1247.62Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig111contigD-mesarthrocarpus_Contig111:49583..50791 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FQ50
PFAMsAminotran_1_2
Model size189
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0008144,GO:0008483,GO:0010326,GO:0016740,GO:0016769,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363
Exons2
Evalue5.85e-21
EggNOG OGsCOG0436@1|root,KOG0257@2759|Eukaryota
Ec32 ortholog descriptionAspartate Aminotransferase
Ec32 orthologEc-01_007480.1
Descriptiontransferase activity, transferring nitrogenous groups
Cds size189
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789237.080304-CDS-D-mesarthrocarpus_Contig111:49582..496271680789237.080304-CDS-D-mesarthrocarpus_Contig111:49582..49627Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig111 49583..49627 -
1680789237.092761-CDS-D-mesarthrocarpus_Contig111:50647..507911680789237.092761-CDS-D-mesarthrocarpus_Contig111:50647..50791Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig111 50648..50791 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig111.9.1prot_D-mesarthrocarpus_Contig111.9.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig111 49583..50791 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig111.9.1

>prot_D-mesarthrocarpus_Contig111.9.1 ID=prot_D-mesarthrocarpus_Contig111.9.1|Name=mRNA_D-mesarthrocarpus_Contig111.9.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=63bp
GWRLGWAIGPPALLRGLGKLHSSLTYCAATPLQYGLSEALGKEDGSFEGI
PRLIEGNAAILAE
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mRNA from alignment at D-mesarthrocarpus_Contig111:49583..50791-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig111.9.1 ID=mRNA_D-mesarthrocarpus_Contig111.9.1|Name=mRNA_D-mesarthrocarpus_Contig111.9.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1209bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig111:49583..50791- (Discosporangium mesarthrocarpum MT17_79)
GGATGGAGGCTTGGATGGGCTATCGGACCCCCTGCCCTCCTGCGTGGGCT
TGGCAAACTGCACTCCTCGCTGACCTACTGTGCCGCCACTCCCCTGCAGT
ATGGCCTCTCGGAGGCGCTGGGGAAGGAGGATGGCTCTTTTGAGGTCTGG
AAGATGTTTTGACATGGAGAGTGTCCCTCCCGAGGCATCTTGCTTGATGT
GTTTGATTTCGTGTGCTTGGATGGTGGGGGGGGAGGGGACAGTTGACCAA
GGGTTGATCCCATGCTTTATGTGCAGCCGATTTGTCCGTCTTCAGGGGGA
TCTGAGACAACGCTCACACCCCTCCTTGGTTTGTGTGTGAGGCGGTCGAA
CTCGAATGCTGGGCGGTATGTACTACTGCTTTGCTTGCCATGGCGAGCCC
CCTACAACCACTGGGAAGTACCAGAGCTCTACATGGTTTCAGAGGACGTG
GTGTGTTTGCTCAGAGCTGCTCATAGGAGTGGCTTCCCGAGAAATGCAAG
GCATTTTTTTTCTTGTCTTGCTTGGAGGACACTCTTTATTTTTGTCCAAG
GGTTCGAATTCGTAGCCCAAGGTTGGCCAGCACCGTGGTCCCTATCAGAT
TGCCCTACGTGCCACCTATCAGGAAGCGTGTGGGCGTGTTATTGGTTGGG
CCAGTTAGGGTTAGGGCTGGGGTTGGGGTTGGGGTTGGGGTTGGGGTTTG
GGGTAAGAGACATTGCGCTGCCATTGCTACCAGGTAGGGGTCAGCTGCCC
TCCTTCATCTCCTGCATCAGCGAGGAGGTGACCTTGCCCGTCCAGGCAGT
ATTGCCCCCCGGTTGGTGCCTCCCTGGCGCGTGAGTGTGCTATGAAGCTC
TGACACATTTTTTGAGACCCTTTTGACAAGTGTGTGTCTCAGTCGGCAGG
CGTCTTGGCCCCCCCTGCCCTCGTACCTTGCTGCTTGGATAATATCGATG
ACCCCCATCGCCCACACCACACAGATAAACCTGTCTGAACGCCAGTGAAA
CACCATGCTGTACTGTACTGTACTGTACCTTTACTCACCGCCCACCTGTA
TGCCCATCACTGCCCGGCTTTATCAATTTTTTTTTTTTTTTGGGGGGGGG
GGGTGGTGCCACCCGTGGGACCCAACCTGGGATTGTTTCACCCTTTTGCC
ACCTATATATACAGGGTATACCAAGGCTGATTGAGGGAAATGCAGCCATC
CTTGCTGAA
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig111:49583..50791-

>mRNA_D-mesarthrocarpus_Contig111.9.1 ID=mRNA_D-mesarthrocarpus_Contig111.9.1|Name=mRNA_D-mesarthrocarpus_Contig111.9.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=189bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig111:49583..50791- (Discosporangium mesarthrocarpum MT17_79)
GGATGGAGGCTTGGATGGGCTATCGGACCCCCTGCCCTCCTGCGTGGGCT
TGGCAAACTGCACTCCTCGCTGACCTACTGTGCCGCCACTCCCCTGCAGT
ATGGCCTCTCGGAGGCGCTGGGGAAGGAGGATGGCTCTTTTGAGGGTATA
CCAAGGCTGATTGAGGGAAATGCAGCCATCCTTGCTGAA
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