mRNA_D-mesarthrocarpus_Contig111.2.2 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig111.2.2
Unique NamemRNA_D-mesarthrocarpus_Contig111.2.2
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig111.2.2 vs. uniprot
Match: D7FNH1_ECTSI (U3 small nucleolar RNA-associated protein 11 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNH1_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 2.490e-123
Identity = 189/247 (76.52%), Postives = 221/247 (89.47%), Query Frame = 1
Query:    1 MSSLRNAVKRIEHKERAQPATRKKLGLLEKHKDYVLRARDFGKKRDRMKALKLKASMKNPDEFYFGMHRTKTKGGVHEIDGGTSLPQDVVQVMKTQDLRYVLTKRAEDEKKADKLRESLHFLDAGPRNKHTIFLDTEEEAERFDPVEHFDTVPELAGRSFNRPRKGTLESAQVTGATSRKQLRKVLKKRDRAYGELSQRLKRAEKMKMAEEHLETQRKVMNSRGTKRKVKEAEGGRPAVFKWKRERA 741
            MSSLRNAVKR+EHKERAQPA+R+KLGLLEKHKDYVLRAR++GKKRDRM+ALKLKA+MKNPDEFYF MHR KT+GGVH +DG  +LP DVVQ++KTQDL YV T R+ DE+KA KLRESLH L+AGPRNKHTIF D+E+EA+ FD  +HFDTVPELA R+FNRPRK TLE AQVTGAT+R+QL+KVLKKRD +Y EL QRL+RAEKMK AE HLE QRKVMNS+GTKRKV+EA+ GRPAV++WK+ER+
Sbjct:    1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDGAETLPHDVVQLLKTQDLGYVSTHRSADERKAAKLRESLHMLEAGPRNKHTIFFDSEKEAKEFDVAKHFDTVPELADRAFNRPRKDTLEKAQVTGATNRRQLKKVLKKRDASYSELMQRLERAEKMKKAEVHLEAQRKVMNSKGTKRKVQEAKDGRPAVYRWKKERS 247          
BLAST of mRNA_D-mesarthrocarpus_Contig111.2.2 vs. uniprot
Match: A0A836CK24_9STRA (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK24_9STRA)

HSP 1 Score: 289 bits (740), Expect = 1.090e-91
Identity = 150/247 (60.73%), Postives = 185/247 (74.90%), Query Frame = 1
Query:    1 MSSLRNAVKRIEHKERAQPATRKKLGLLEKHKDYVLRARDFGKKRDRMKALKLKASMKNPDEFYFGMHRTKTKGGVHEIDGGTSLPQDVVQVMKTQDLRYVLTKRAEDEKKADKLRESLHFLDAGPRNKHTIFLDTEEEAERFDPVEHFDTVPELAGRSFNRPRKGTLESAQVTGATSRKQLRKVLKKRDRAYGELSQRLKRAEKMKMAEEHLETQRKVMNSRGTKRKVKEAEGGRPAVFKWKRERA 741
            MSSLRNAVKR  HKERAQPA+R K GLLEKH DYVLRARD+  KRDR+ AL+LKAS++NPDEFYFGMH+ KTK GVH+++G +SL  +   ++KTQD+ Y+  KRA D KKA++L+  LH LDA P+N HT+F+  + +   FD  E+FDT PELAGR+FNRPR  TLES QV GA SR  L+K LK+RD AY E+  R +RA KM  A  HL  QR +M +RGT  KVK AE G+P V+KWKR+RA
Sbjct:    1 MSSLRNAVKRKTHKERAQPASRSKFGLLEKHSDYVLRARDYNAKRDRLNALRLKASLRNPDEFYFGMHKAKTKEGVHQVEGSSSLDHETAHMLKTQDMAYIHMKRAVDIKKAERLKAGLHMLDAPPQNTHTVFVKNKRQRRAFDAAEYFDTAPELAGRTFNRPRMATLESKQVLGAESRADLKKALKQRDAAYQEVEAREERARKMTRAAAHLAAQRALMTARGTVTKVKGAEKGQPPVYKWKRQRA 247          
BLAST of mRNA_D-mesarthrocarpus_Contig111.2.2 vs. uniprot
Match: A0A8K1CCZ2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCZ2_PYTOL)

HSP 1 Score: 248 bits (632), Expect = 1.590e-75
Identity = 133/246 (54.07%), Postives = 177/246 (71.95%), Query Frame = 1
Query:    7 SLRNAVKRIEHKERAQPATRKKLGLLEKHKDYVLRARDFGKKRDRMKALKLKASMKNPDEFYFGMHRTKTKGGVHEIDGGTS--LPQDVVQVMKTQDLRYVLTKRAEDEKKADKLRESLHFLDAGPRNKHTIFLDTEEEAERFDPVEHFDTVPELAGRSFNRPRKGTLESAQVTGATSRKQLRKVLKKRDRAYGELSQRLKRAEKMKMAEEHLETQRKVMNSRGTKRKVKEAEGGRPAVFKWKRER 738
            SLRN VKR EHKER Q   RKKLGLLEKHKDYVLRARD+ KK+DR++ +KLKA+ +NPDEFYF M+ T+T+ GVH  +   S  L  + ++V+KTQDL Y+  KRA D +KA+KL + LHF+DA   NKHT+F+D+ E+   FD   HFDT PELA R+FNR RK TL++  +   T +KQLR + K+RD  Y EL+ RL RA K++   + L+ +RKV  ++G KRKV++ +  RP V+KWK+ER
Sbjct:    2 SLRNVVKRREHKERGQLQERKKLGLLEKHKDYVLRARDYNKKQDRLRTMKLKAAFRNPDEFYFKMNTTRTEDGVHVSENNHSEKLSAEALKVLKTQDLAYLHMKRAVDLRKAEKLTQGLHFIDAPKNNKHTVFVDSSEDLNTFDVATHFDTAPELADRAFNRLRKETLKTTTIQATTDKKQLRALTKERDAVYRELNDRLIRATKIQQMSDRLDLERKVQ-AKGKKRKVQDGDSSRPPVYKWKKER 246          
BLAST of mRNA_D-mesarthrocarpus_Contig111.2.2 vs. uniprot
Match: A0A4D9DA46_9STRA (U3 small nucleolar RNA-associated protein 11 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DA46_9STRA)

HSP 1 Score: 240 bits (613), Expect = 1.180e-72
Identity = 134/247 (54.25%), Postives = 174/247 (70.45%), Query Frame = 1
Query:    4 SSLRNAVKRIEHKERAQPATRKKLGLLEKHKDYVLRARDFGKKRDRMKALKLKASMKNPDEFYFGMHRTKTKGGVHEI-DGGTSLPQDVVQVMKTQDLRYVLTKRAEDEKKADKLRESLHFLDAGPRNKHTIFLDTEEEAERFDPVEHFDTVPELAGRSFNRPRKGTLES-AQVTGATSRKQLRKVLKKRDRAYGELSQRLKRAEKMKMAEEHLETQRKVMNSRGTKRKVKEAEGGRPAVFKWKRER 738
            +SLRNA+ R  +KER+QPA RKK GLLEKHKDYV RA D+ +K   + +L+ KA+ +NPDEFYF M + +TK GVH +     SLP D + ++KTQD+RYV  KRA D KKA+KL+  LHFL     NKHT+F+DTE E E FDP +HF T P L  R+FNRP+  TLE+   V G  +  +L+KV K R++AY EL +RLKR+   K   EH++ ++ VM  +G KRKV+EAE G+PAVFKWKRER
Sbjct:    4 ASLRNAIPRKTNKERSQPAARKKFGLLEKHKDYVQRANDYKRKSKALASLREKAAFRNPDEFYFAMTKGQTKEGVHRVRPAEASLPHDHIALLKTQDMRYVTMKRALDVKKAEKLQAGLHFLTEEAANKHTVFVDTEAEVETFDPAKHFGTDPALVTRAFNRPKLETLETPGAVLGVANVGELKKVRKAREKAYTELGERLKRSLSFKEVLEHMQVEKNVMG-KGRKRKVQEAEDGKPAVFKWKRER 249          
BLAST of mRNA_D-mesarthrocarpus_Contig111.2.2 vs. uniprot
Match: A0A5D6XJY8_9STRA (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJY8_9STRA)

HSP 1 Score: 238 bits (608), Expect = 6.360e-72
Identity = 127/248 (51.21%), Postives = 175/248 (70.56%), Query Frame = 1
Query:    7 SLRNAVKRIEHKERAQPATRKKLGLLEKHKDYVLRARDFGKKRDRMKALKLKASMKNPDEFYFGMHRTKTKGGVHEIDG----GTSLPQDVVQVMKTQDLRYVLTKRAEDEKKADKLRESLHFLDAGPRNKHTIFLDTEEEAERFDPVEHFDTVPELAGRSFNRPRKGTLESAQVTGATSRKQLRKVLKKRDRAYGELSQRLKRAEKMKMAEEHLETQRKVMNSRGTKRKVKEAEGGRPAVFKWKRER 738
            SLRN VKR EHKER QP  RKKLGLLEKHKDYV RARD+  K+DR++ ++LKA+ +NPDEFYF M+ T+T+GGVH  D     G +L  D ++V+KTQD+ Y+  KRA D +KA+KL   LHF+DA   NKH +F+D+E +  +FD   HFDT PELA R+FNR R   L++  +   +S K+++K  ++RD  Y ELS RL+RA  +      L+ +RKV  ++G K K+K+AE G+PAV++WK++R
Sbjct:    2 SLRNVVKRREHKERGQPQERKKLGLLEKHKDYVKRARDYNSKQDRLRTMQLKAAFRNPDEFYFRMNATRTEGGVHVSDNNRLDGKALTADALKVLKTQDVAYLHLKRAVDMRKAEKLNAGLHFIDAPTANKHVVFVDSEAQLAKFDVAAHFDTAPELADRAFNRVRMDALKTLALPAVSSAKEIKKRNRERDGVYRELSDRLERAATLDRMRAKLDLERKVQ-AKGKKMKIKDAENGQPAVYRWKKQR 248          
BLAST of mRNA_D-mesarthrocarpus_Contig111.2.2 vs. uniprot
Match: K3WAT9_GLOUD (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAT9_GLOUD)

HSP 1 Score: 236 bits (602), Expect = 4.970e-71
Identity = 131/249 (52.61%), Postives = 177/249 (71.08%), Query Frame = 1
Query:    1 MSSLRNAVKRIEHKERAQPATRKKLGLLEKHKDYVLRARDFGKKRDRMKALKLKASMKNPDEFYFGMHRTKTKGGVHEIDGG--TSLPQDVVQVMKTQDLRYVLTKRAEDEKKADKLRESLHFLDA-GPRNKHTIFLDTEEEAERFDPVEHFDTVPELAGRSFNRPRKGTLESAQVTGATSRKQLRKVLKKRDRAYGELSQRLKRAEKMKMAEEHLETQRKVMNSRGTKRKVKEAEGGRPAVFKWKRER 738
            MSSLRN VKR EHKER Q   RKKLGLLEKHKDYV RARD+ KK+D +KAL +KA+ +NPDEFYF M+ T+T+ GVH         L  + ++V+KTQDL Y+  KRA D +KA+KL E LHF+DA G  NKH +F+D+++E E FD  +HFDTVPE+A R+FNR RK TL++  +     +K L+K+  +RD  Y EL+ RL+RA  +      L+ +RKV  ++G K K+K+AE G+PAV++WK++R
Sbjct:    1 MSSLRNVVKRREHKERGQLRERKKLGLLEKHKDYVKRARDYNKKQDHLKALAVKAAFRNPDEFYFRMNSTRTEDGVHVSTHNHHKQLSAEALKVLKTQDLAYLHMKRAVDLRKAEKLNEGLHFIDAAGKDNKHVVFVDSKDEVESFDVAKHFDTVPEIADRAFNRLRKDTLKTVSLPAVQDKKTLKKLGIERDAVYRELNDRLQRASTIDRMRAKLDLERKVQ-AKGKKMKIKDAEDGQPAVYRWKKQR 248          
BLAST of mRNA_D-mesarthrocarpus_Contig111.2.2 vs. uniprot
Match: A0A7S2W8G3_9STRA (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8G3_9STRA)

HSP 1 Score: 229 bits (585), Expect = 2.150e-68
Identity = 128/258 (49.61%), Postives = 179/258 (69.38%), Query Frame = 1
Query:    1 MSSLRNAVKRIEHKERAQPATRKKLGLLEKHKDYVLRARDFGKKRDRMKALKLKASMKNPDEFYFGMHRTKTKGGVHEI---DGGTSLPQDVVQVMKTQDLRYVLTKRAEDEKKADKLRESLHFLDAGPRNKHTIFLDTEEEAERFDPVEHFDTVPELAGRSFNRPRK--------GTLESAQVTGATSRKQLRKVLKKRDRAYGELSQRLKRAEKMKMAEEHLETQRKVMNSRGTKRKVKEAEGGRPAVFKWKRERA 741
            M+SLRNA+ R  H+ER+Q A+R  LGLLEK KDYV RARDF +K  ++K L+ KA  +NPDEFYFGM   KTK GVH     DG   L  D + +MK+QDL Y+  K+A D++K+++L+  LH L   P N+HT+FLD  ++ E FD  EHFDT+PELAGR+FNRPR+        G++ S  V  +TS KQ +K++K +D+AY +L++RL+R+EK++   +  E ++KVM  +G KRKV+ +  G P V+KWKR+RA
Sbjct:    1 MASLRNALPRRTHRERSQVASRAHLGLLEKKKDYVERARDFQRKTGKIKNLRKKARERNPDEFYFGMVNQKTKDGVHVAERNDGADKLSHDDILLMKSQDLGYLSMKKAVDDRKSERLQSGLHMLLDKPLNQHTVFLDKSKDVETFDAAEHFDTMPELAGRAFNRPRRKAFEADKEGSIASTPVMTSTSSKQYKKIMKSKDKAYEDLAERLERSEKLRKLIQRKEVEKKVMG-KGRKRKVEGSSSGAPPVYKWKRKRA 257          
BLAST of mRNA_D-mesarthrocarpus_Contig111.2.2 vs. uniprot
Match: A0A0P1B0R4_PLAHL (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B0R4_PLAHL)

HSP 1 Score: 228 bits (580), Expect = 9.230e-68
Identity = 131/249 (52.61%), Postives = 172/249 (69.08%), Query Frame = 1
Query:    1 MSSLRNAVKRIEHKERAQPATRKKLGLLEKHKDYVLRARDFGKKRDRMKALKLKASMKNPDEFYFGMHRTKTKGGVHEIDGG--TSLPQDVVQVMKTQDLRYVLTKRAEDEKKADKLRESLHFLDAGPRNKHTIFLDTEEEAERFDPVEHFDTVPELAGRSFNRPRKGTLESAQVTG-ATSRKQLRKVLKKRDRAYGELSQRLKRAEKMKMAEEHLETQRKVMNSRGTKRKVKEAEGGRPAVFKWKRER 738
            MSSLRN VKR EHKER Q   R+KLGLLEKHKDYV RA+D+  K+ R+K L+LKA+++NPDEFY  MH  KT+GGVH        SL  + ++ +KTQDL Y+  KRA D +KA++L   LHF+DA   NKHT+F+D +E+ E FD  ++FDTVPELA R+FNR R+  LE  ++   A S KQ  K+  +RD  Y EL  RL RA+K+      L+ +RKV  ++G KRKVK AE G PAV++WK++R
Sbjct:    1 MSSLRNVVKRREHKERGQLRDRRKLGLLEKHKDYVKRAQDYNSKQKRLKMLQLKAALRNPDEFYHRMHNNKTEGGVHISTHNHLKSLSTEALRTLKTQDLAYLHLKRAVDLRKAERLNRGLHFVDAPKDNKHTVFVDDKEQVENFDVAQYFDTVPELADRAFNRIRRRDLEMVELPDMAASPKQKYKMQVERDALYRELRDRLTRAKKIGQMSAKLDLERKVQ-AKGRKRKVKAAENGMPAVYRWKQQR 248          
BLAST of mRNA_D-mesarthrocarpus_Contig111.2.2 vs. uniprot
Match: D0NVW8_PHYIT (U3 small nucleolar RNA-associated protein 11 n=14 Tax=Phytophthora TaxID=4783 RepID=D0NVW8_PHYIT)

HSP 1 Score: 226 bits (576), Expect = 3.620e-67
Identity = 129/249 (51.81%), Postives = 170/249 (68.27%), Query Frame = 1
Query:    1 MSSLRNAVKRIEHKERAQPATRKKLGLLEKHKDYVLRARDFGKKRDRMKALKLKASMKNPDEFYFGMHRTKTKGGVHEIDGG--TSLPQDVVQVMKTQDLRYVLTKRAEDEKKADKLRESLHFLDAGPRNKHTIFLDTEEEAERFDPVEHFDTVPELAGRSFNRPRKGTLESAQVTG-ATSRKQLRKVLKKRDRAYGELSQRLKRAEKMKMAEEHLETQRKVMNSRGTKRKVKEAEGGRPAVFKWKRER 738
            MSSLRN VKR EHKER Q   R+KLGLLEKHKDYV RARD+  K+ R+K L+LKA+++NPDEFY  M  TKT+GGVH        S+  + ++ +KTQDL Y+  KRA D +KA++L   LHF+DA   N HT+F+D EE+ + FD  EHFDT PEL  R+FNR RK  LE+A++   A + KQ  K+  ++D  Y EL  RL RA K+      L+ +RKV  ++G K+KVK AE G PAV++WK++R
Sbjct:    1 MSSLRNVVKRREHKERGQLRERRKLGLLEKHKDYVKRARDYNSKQKRLKTLQLKAALRNPDEFYHRMRGTKTEGGVHVSTHNHIKSVETEALRTLKTQDLAYLHMKRAVDLRKAERLNRGLHFVDAPKNNNHTVFVDDEEQVDSFDVAEHFDTAPELVDRAFNRIRKRDLETAELPDLAANPKQKYKMQVEKDAMYRELRDRLARANKLGQMSAKLDLERKVQ-AKGRKKKVKAAENGMPAVYRWKQQR 248          
BLAST of mRNA_D-mesarthrocarpus_Contig111.2.2 vs. uniprot
Match: A0A7S0UKD3_9STRA (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UKD3_9STRA)

HSP 1 Score: 223 bits (567), Expect = 1.470e-65
Identity = 129/269 (47.96%), Postives = 177/269 (65.80%), Query Frame = 1
Query:    1 MSSLRNAVKRIEHKERAQPATRKKLGLLEKHKDYVLRARDFGKKRDRMKALKLKASMKNPDEFYFGMHRTKTKGGVHEI-DGGTSLPQDVVQVMKTQDLRYVLTKRAEDEKKADKLRESLHFLDA------GPRNKHTIFLDTEEEAERFDPVEHFDTVPELAGRSFNRPRKGTLESAQVTGATSRKQL----------------RKVLKKRDRAYGELSQRLKRAEKMKMAEEHLETQRKVMNSRGTKRKVKEAEGGRPAVFKWKRER 738
            MSSLRNAVKRI HKER+QP  R+ LG+LEK KDY  RA D+ +K DR+KA++ K +MKNPDEFYFGMH +K + G H   +    L  ++V+VMK QDL YV  ++ +D KKA+KL+ SLH LDA      G + KHTIF+ +++EA  FD  +HFDT+PE  GR+FNR RK  +E       +  +QL                +K+ K R  AY E+  R +RA+KM+ AE+HL T+ K+++S+G KRK+K  E G+PA +KW+R+R
Sbjct:    1 MSSLRNAVKRIAHKERSQPLDRQHLGILEKKKDYKQRAIDYHRKEDRIKAMQQKVAMKNPDEFYFGMHNSKVENGKHRSSEDYRVLDPELVKVMKDQDLSYVRMQKQKDIKKAEKLQASLHLLDADNEDAVGSKRKHTIFVKSKKEASEFDVAQHFDTIPEFEGRAFNRLRKRDIEKLSKNNTSGERQLTTEELHKLRKTEQKLAKKLAKARASAYREMESRRERADKMRTAEDHLITE-KLVSSKGRKRKLKTGEDGKPAQYKWRRKR 268          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig111.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNH1_ECTSI2.490e-12376.52U3 small nucleolar RNA-associated protein 11 n=2 T... [more]
A0A836CK24_9STRA1.090e-9160.73U3 small nucleolar RNA-associated protein 11 n=1 T... [more]
A0A8K1CCZ2_PYTOL1.590e-7554.07Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A4D9DA46_9STRA1.180e-7254.25U3 small nucleolar RNA-associated protein 11 n=2 T... [more]
A0A5D6XJY8_9STRA6.360e-7251.21U3 small nucleolar RNA-associated protein 11 n=1 T... [more]
K3WAT9_GLOUD4.970e-7152.61U3 small nucleolar RNA-associated protein 11 n=1 T... [more]
A0A7S2W8G3_9STRA2.150e-6849.61U3 small nucleolar RNA-associated protein 11 n=1 T... [more]
A0A0P1B0R4_PLAHL9.230e-6852.61U3 small nucleolar RNA-associated protein 11 n=1 T... [more]
D0NVW8_PHYIT3.620e-6751.81U3 small nucleolar RNA-associated protein 11 n=14 ... [more]
A0A7S0UKD3_9STRA1.470e-6547.96U3 small nucleolar RNA-associated protein 11 n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig111contigD-mesarthrocarpus_Contig111:604..5039 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FNH1
Preferred nameUTP11L
PFAMsUtp11
Model size1572
Max annot lvl2759|Eukaryota
KEGG koko:K14685,ko:K14769
KEGG TC2.A.100.1
KEGG Pathwayko04216,ko04978,map04216,map04978
Hectar predicted targeting categoryother localisation
GOsGO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000472,GO:0000478,GO:0000479,GO:0000480,GO:0000966,GO:0000967,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010941,GO:0010942,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0030490,GO:0030515,GO:0030684,GO:0031974,GO:0031981,GO:0032040,GO:0032501,GO:0032502,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0042981,GO:0043043,GO:0043065,GO:0043067,GO:0043068,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0048518,GO:0048522,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
Exons6
Evalue1.22e-127
EggNOG OGsCOG5223@1|root,KOG3237@2759|Eukaryota
Ec32 ortholog descriptionSmall-subunit processome, Utp11
Ec32 orthologEc-01_005480.1
DescriptionrRNA processing
Cds size747
COG categoryL
BRITEko00000,ko00001,ko02000,ko03009
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig111.2.2prot_D-mesarthrocarpus_Contig111.2.2Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig111 1429..5039 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789236.6785777-UTR-D-mesarthrocarpus_Contig111:603..14281680789236.6785777-UTR-D-mesarthrocarpus_Contig111:603..1428Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig111 604..1428 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789236.6917715-CDS-D-mesarthrocarpus_Contig111:1428..15691680789236.6917715-CDS-D-mesarthrocarpus_Contig111:1428..1569Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig111 1429..1569 -
1680789236.7095585-CDS-D-mesarthrocarpus_Contig111:2396..24861680789236.7095585-CDS-D-mesarthrocarpus_Contig111:2396..2486Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig111 2397..2486 -
1680789236.7228348-CDS-D-mesarthrocarpus_Contig111:2988..30791680789236.7228348-CDS-D-mesarthrocarpus_Contig111:2988..3079Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig111 2989..3079 -
1680789236.7331805-CDS-D-mesarthrocarpus_Contig111:4191..43431680789236.7331805-CDS-D-mesarthrocarpus_Contig111:4191..4343Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig111 4192..4343 -
1680789236.7457159-CDS-D-mesarthrocarpus_Contig111:4573..47431680789236.7457159-CDS-D-mesarthrocarpus_Contig111:4573..4743Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig111 4574..4743 -
1680789236.7572865-CDS-D-mesarthrocarpus_Contig111:4936..50391680789236.7572865-CDS-D-mesarthrocarpus_Contig111:4936..5039Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig111 4937..5039 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig111.2.2

>prot_D-mesarthrocarpus_Contig111.2.2 ID=prot_D-mesarthrocarpus_Contig111.2.2|Name=mRNA_D-mesarthrocarpus_Contig111.2.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=249bp
MSSLRNAVKRIEHKERAQPATRKKLGLLEKHKDYVLRARDFGKKRDRMKA
LKLKASMKNPDEFYFGMHRTKTKGGVHEIDGGTSLPQDVVQVMKTQDLRY
VLTKRAEDEKKADKLRESLHFLDAGPRNKHTIFLDTEEEAERFDPVEHFD
TVPELAGRSFNRPRKGTLESAQVTGATSRKQLRKVLKKRDRAYGELSQRL
KRAEKMKMAEEHLETQRKVMNSRGTKRKVKEAEGGRPAVFKWKRERAS*
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mRNA from alignment at D-mesarthrocarpus_Contig111:604..5039-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig111.2.2 ID=mRNA_D-mesarthrocarpus_Contig111.2.2|Name=mRNA_D-mesarthrocarpus_Contig111.2.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=4436bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig111:604..5039- (Discosporangium mesarthrocarpum MT17_79)
ATGTCGTCCCTTCGTAATGCGGTGAAGCGTATCGAGCATAAGGAGAGAGC GCAACCAGCAACGAGGAAGAAGTTGGGCCTGTTGGAGAAGCATAAGGACT ATGGTAAGGAAATGCTGCCACTAATCGCTACCTCTAGAATTCTGGGTGTC ATGAAAGAATACCAACCGTGTACTTCTAAGGGAAAATGTGAGCTCTCATG GCGTCGAGCTACGCGACAGAACGTAAAGTAGGTGCATACCCTCAACAGCA CCATCCCCTACGTGCTCTTAACCCACCCGCTTCTGGCGGCGTGAAGTGCT ACGCGCGAGGGACTTCGGGAAAAAGCGGGATAGGATGAAGGCATTGAAGC TCAAGGCATCTATGAAGAACCCGGACGAGTTCTACTTCGGCATGCATAGG ACAAAGACGAAGGGGGGGGTTCACGAGATCGACGGAGGGACGTCCTTGCC GCAGGACGTGGTGCAGGTGAGACTGGCCTCACTGTGCCCCATTGGCAGCT CTGAAATCCGGGAAAACTTGTCAAGTTTTTGGCTGGACCTGAAACGGACA ACACCCTCGATACCCAGCCTCCCCAACATGACATCACCAACACACAGTAT AGATACTTTACCAGTACCTCCTGTGATCAATGCTGACAACCGTAATTGCA AAACCTGCTCTACGTTCCCATCCACACCACCCCCACTCCGTAATAGGTGA TGAAAACCCAGGACCTGAGGTACGTTCTTACCAAGCGGGCGGAGGATGAG AAAAAGGCAGACAAGCTGCGTGAATCACTACACTTCTTGGATGCAGGGCC TCGCAACAAGCACACAATATTCTTAGACACTGAGGAGGAAGCGGAAAGGT ACGGACGGATTTTTTTTTTCTTCATATACCTTGAGGAACCCAATTCAGTT GCAGTTGCTTGCTTAGGGCTCTTACCTTAAGGAATCTACCTGCATGCTGT CCATGGGTAAAGTGCCTCGTTATGTATTTTAGGGGTAGGGTTAAGGATAC TTGGCACTACAAGGTGGTGTAATTTAGTAATAATGTTGGTGTCTGCCAGT AGTTAGGGATGACAATGAACAGTGTTTTTTTGCTTGCGTGATGCCACCAT GGCAGTAAGTCTTTTTTCTACAGACACATGGAGATGGTAACGTGATACGG GACTCTTTCTTTGTTGATAAGACACGTGCATAACAGGCTTCGATATGTAG CTGATGTGGGTGATTAGGAATGATTCTCTGTTGCCAAGTAGAGCTCCACA TCCCAAGGGGTTGTTGGGCGAAGATGGTCATTAGAGCACCCAACTCCTCT TGCATTCATGAAGGGGAAGTGTTTAGGTGGATCAGCTCTCGGGGGGGGCT TGTCCTTGTTTTTGACAACTGAAGAGTAGTCACAACGGGAAGGAGCAGAA TGGGTTGGATGTATGACTCCTACTCCTCCTAGATCCTTTCACGTCTCTCA CCTCTCTCCTCTGCTGCTACTACACGATACTGCGCCACAAGTAGTTTGCA CTGTACATGCCTTCGTATGATGATATCCTTGTTGCAGCCTCCGATTCAGT TGGCTCTGTTCTTCAATCCCTGGCGATATTTTTTCACCTCGGCCCCGCTC CTTTTGGGTTGGTTAGACCTGCAGTCACGACTTCATGCCTTGTAAATTTT CCATGGCTGTTGCAGGCATGGGTTGGTTGGCCTGTCTCAGTTTTTGCTCT CTTTATTGTGGTGCTCTTTTAGGGTGCTGATTTATTGAGCTCGTTTCACA TCCGTCTCGATAGCTCTGTTGCTGTACTGTACAGTAGTTTATGCTAAAAA AACCCTAACCCTTGCCTGCCCTCTACTCGGTATCACGATTCCTTACATCT CCCTCTGTTGTTGTCTGTGCATGTGCCTTTCACCCTTTCTCTTTTTTCTC TCTTTTCCTTCTTCTCTTCTCTTCCTTTCCGCCTTTCCTATGTTTGTCTT CTTCCGCCAGGTTTGATCCCGTGGAGCACTTTGATACTGTGCCGGAGCTG GCGGGGAGATCATTCAACCGACCCCGCAAGGGCACGCTTGAGTCTGCGCA GGTTGAAAAATAGTGAAAAGAAAATCTTGATTACAATATAGAGGAGGAAA TGGCTTGGCTTGGGAGTGAAGAGTGGGTGTGTTGAGGAAAAGAAGAGGGG AAATGCTTCCAAACTTCAGTTACCACTGTACTGCACAGTACTGTACTGAC TCTACTCCACTGTACTGTGAGGGCATGACTATGGGCGGAGGTATATATAC ATATATGTTGTGGTCAATATTCTGTGTAATGTGTTTTTCAGACTCATGAC AATGTGGTGGAAGGAATGCAGGTAGCTGCGGTATTTATCAGTGACAAGGT GAGGGGGAGAGCAGGACCACTCGCCTTTTCTATGAAAGACAAGAGGTGTG TCCTCAGGTGTGCAGATGGAATGAGGGCGCATGAAAATGAAGGCCCCTGT TGACAGGCCCTCTTACTTGCGCCTGAACCACTGCTTGTTTTGTATCTCGC TTCATGAACGGCAAACATTACCTTTGGGATAATGGGGGATACCCTACCGC CAGGTGACAGGAGCAACCAGCCGGAAGCAACTGCGCAAGGTCCTCAAGAA GCGAGACAGGGCCTACGGGGAACTCTCGCAGCGCTTGAAGAGGGTGAGCT TTGCCCACACAGGGCATGAAGGAGGTGTAAGAGCTGTGGATGGTCACCGT GGAGAGCTCTGTGCCTGTTTTTTCCCCCCTGTCCCACCCAAAGTAGTTGA TTCCAGTTACATGTTGCGCTCTTGAGAGTATAGCATTCCGCTGGTTTGAC CCCCCAGAGGTCTGATGCAATTTTCATTTTTCATTTTTCATTCCCCTGAA TGTGGAGAAGGCTCTGAAGGGAAATTGAGTTGAATGACAGGTGCACTATT TTTTTTGGTTCTTGTCCACCTGCCTCACGGTGGTCTGTATGAGAAGATCT ATCGTCACTACCCCCAATTCTATTCCTTCGAAGTAGTCCTATGGAGAAGT CCGTACCATATTTGAAGTTTTTGTATCTCATCTTGATTGTTCCCCCCCCC CCCCTCCCCATCTTCACATCTCTTCAGCCAGTATCCCCCTCCGTTATTTT GGCGAGGAGCTCTTGTAGTACAATACCACACACCGCTGTAGGCAACTGTG ATACCATGAAAGGACTTGCGGAGATGACCATGCCCAGCCCTTAGCCCCTT CTTCACTAGCCCCTCCCCTGTTGCTGCATTGCCCCCCCCCTGCACACCCC CCACGTACTTGGCTCGCTCACCTCTGTGAAATGCTTGATACCTGCTGTCC TTCATCTACTGCCCACCGAGCATCGACTGCCTTATTTCTCGCTGTGGAAG CACCTTTGTTACCGCGTTTGAGGTGCCCGCGGCTCCTCCTCCTTTTTTTT TTTGTTGGCGTCACACACGGACCGTTTTTCTGTTCGTTGTTTGCTGCTTC TTGCTGCTCCCTCCGTCCAGGCGGAGAAGATGAAGATGGCGGAGGAGCAC CTTGAGACGCAACGCAAGGTGATGAACTCCAGAGGCACAAAGAGGAAGGT CAAGGAGGCAGAGGGTGGCCGGCCGGCAGTGTTCAAGTGGAAGCGGGAGA GGGCTAGCTGAAGCATCACTACCTATTGCTAGACTGTTCATTTCGATTGT TGTTGTTGTTGTGGTGTGTACCTGTAGAGAATTTTATGCGGCCACGCATA GAAAAAAAAACAGACCTTGGGAAGGAAATGGAGAGGGAGTGCACTTGAGG CCACATCTCACAGAGGAGACTGCTGCCAATCTGCTCCTTGGTGCTTGATG TGAACGGAGGATTGGCTCACTTTGGTGCACACTTTTTTTTTTTTTTCTTT GGGTGTCTTCTCTCGGGTTTGTGGTTTGGTGGTCTGCGAAGAAGGTGGAG ACAAGAAAGGGGTTTCCAAGGTGCAGGGAGGCGATTCATTTGTGTGCATT CCCCTGCTGCTGCCCAGTTGATGCCCTCGGCTGGATAATACCTCGGGACC ATGATGTGATGTCGCCTGGGTGATTTGGATATTTTCCATTCAGCTCGACA GGGATGATGAGGGTATAGTTTTTACAGTATGGACTGCTGGATTTTCATTC TGTCAGCTGGATGTGTCTGCTGTCCCTTGGGACAAGCAAAGGCTTGGTTA ATAAAATAGAAATTTGGGCTGACAAACGCAAGGTGGTGACCACTCCCTCC ACTTGTAACTGATCCATACATTTTGTGGTTGTAGGGGGACTATTAGGGAG AGCCTGACAGGGACATGAGGGAAGAGAATCTGCGCTTCCAATGTGCGATG TGGAGAGTGGGGATACGAGCACCTACCGCATCACCCCTTTTTTTTTTGTC TTGAAGCCCCCGTCCTCAGCCACCGCGTGGCTGAATGGGCAGTACAGTGG GCAGGTCTGCAAGTGTATATTGCTGATTATTACTGG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig111:604..5039-

>mRNA_D-mesarthrocarpus_Contig111.2.2 ID=mRNA_D-mesarthrocarpus_Contig111.2.2|Name=mRNA_D-mesarthrocarpus_Contig111.2.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=747bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig111:604..5039- (Discosporangium mesarthrocarpum MT17_79)
ATGTCGTCCCTTCGTAATGCGGTGAAGCGTATCGAGCATAAGGAGAGAGC
GCAACCAGCAACGAGGAAGAAGTTGGGCCTGTTGGAGAAGCATAAGGACT
ATGTGCTACGCGCGAGGGACTTCGGGAAAAAGCGGGATAGGATGAAGGCA
TTGAAGCTCAAGGCATCTATGAAGAACCCGGACGAGTTCTACTTCGGCAT
GCATAGGACAAAGACGAAGGGGGGGGTTCACGAGATCGACGGAGGGACGT
CCTTGCCGCAGGACGTGGTGCAGGTGATGAAAACCCAGGACCTGAGGTAC
GTTCTTACCAAGCGGGCGGAGGATGAGAAAAAGGCAGACAAGCTGCGTGA
ATCACTACACTTCTTGGATGCAGGGCCTCGCAACAAGCACACAATATTCT
TAGACACTGAGGAGGAAGCGGAAAGGTTTGATCCCGTGGAGCACTTTGAT
ACTGTGCCGGAGCTGGCGGGGAGATCATTCAACCGACCCCGCAAGGGCAC
GCTTGAGTCTGCGCAGGTGACAGGAGCAACCAGCCGGAAGCAACTGCGCA
AGGTCCTCAAGAAGCGAGACAGGGCCTACGGGGAACTCTCGCAGCGCTTG
AAGAGGGCGGAGAAGATGAAGATGGCGGAGGAGCACCTTGAGACGCAACG
CAAGGTGATGAACTCCAGAGGCACAAAGAGGAAGGTCAAGGAGGCAGAGG
GTGGCCGGCCGGCAGTGTTCAAGTGGAAGCGGGAGAGGGCTAGCTGA
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