mRNA_D-mesarthrocarpus_Contig111.2.2 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig111.2.2 vs. uniprot
Match: D7FNH1_ECTSI (U3 small nucleolar RNA-associated protein 11 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNH1_ECTSI) HSP 1 Score: 370 bits (950), Expect = 2.490e-123 Identity = 189/247 (76.52%), Postives = 221/247 (89.47%), Query Frame = 1
Query: 1 MSSLRNAVKRIEHKERAQPATRKKLGLLEKHKDYVLRARDFGKKRDRMKALKLKASMKNPDEFYFGMHRTKTKGGVHEIDGGTSLPQDVVQVMKTQDLRYVLTKRAEDEKKADKLRESLHFLDAGPRNKHTIFLDTEEEAERFDPVEHFDTVPELAGRSFNRPRKGTLESAQVTGATSRKQLRKVLKKRDRAYGELSQRLKRAEKMKMAEEHLETQRKVMNSRGTKRKVKEAEGGRPAVFKWKRERA 741
MSSLRNAVKR+EHKERAQPA+R+KLGLLEKHKDYVLRAR++GKKRDRM+ALKLKA+MKNPDEFYF MHR KT+GGVH +DG +LP DVVQ++KTQDL YV T R+ DE+KA KLRESLH L+AGPRNKHTIF D+E+EA+ FD +HFDTVPELA R+FNRPRK TLE AQVTGAT+R+QL+KVLKKRD +Y EL QRL+RAEKMK AE HLE QRKVMNS+GTKRKV+EA+ GRPAV++WK+ER+
Sbjct: 1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDGAETLPHDVVQLLKTQDLGYVSTHRSADERKAAKLRESLHMLEAGPRNKHTIFFDSEKEAKEFDVAKHFDTVPELADRAFNRPRKDTLEKAQVTGATNRRQLKKVLKKRDASYSELMQRLERAEKMKKAEVHLEAQRKVMNSKGTKRKVQEAKDGRPAVYRWKKERS 247
BLAST of mRNA_D-mesarthrocarpus_Contig111.2.2 vs. uniprot
Match: A0A836CK24_9STRA (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK24_9STRA) HSP 1 Score: 289 bits (740), Expect = 1.090e-91 Identity = 150/247 (60.73%), Postives = 185/247 (74.90%), Query Frame = 1
Query: 1 MSSLRNAVKRIEHKERAQPATRKKLGLLEKHKDYVLRARDFGKKRDRMKALKLKASMKNPDEFYFGMHRTKTKGGVHEIDGGTSLPQDVVQVMKTQDLRYVLTKRAEDEKKADKLRESLHFLDAGPRNKHTIFLDTEEEAERFDPVEHFDTVPELAGRSFNRPRKGTLESAQVTGATSRKQLRKVLKKRDRAYGELSQRLKRAEKMKMAEEHLETQRKVMNSRGTKRKVKEAEGGRPAVFKWKRERA 741
MSSLRNAVKR HKERAQPA+R K GLLEKH DYVLRARD+ KRDR+ AL+LKAS++NPDEFYFGMH+ KTK GVH+++G +SL + ++KTQD+ Y+ KRA D KKA++L+ LH LDA P+N HT+F+ + + FD E+FDT PELAGR+FNRPR TLES QV GA SR L+K LK+RD AY E+ R +RA KM A HL QR +M +RGT KVK AE G+P V+KWKR+RA
Sbjct: 1 MSSLRNAVKRKTHKERAQPASRSKFGLLEKHSDYVLRARDYNAKRDRLNALRLKASLRNPDEFYFGMHKAKTKEGVHQVEGSSSLDHETAHMLKTQDMAYIHMKRAVDIKKAERLKAGLHMLDAPPQNTHTVFVKNKRQRRAFDAAEYFDTAPELAGRTFNRPRMATLESKQVLGAESRADLKKALKQRDAAYQEVEAREERARKMTRAAAHLAAQRALMTARGTVTKVKGAEKGQPPVYKWKRQRA 247
BLAST of mRNA_D-mesarthrocarpus_Contig111.2.2 vs. uniprot
Match: A0A8K1CCZ2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCZ2_PYTOL) HSP 1 Score: 248 bits (632), Expect = 1.590e-75 Identity = 133/246 (54.07%), Postives = 177/246 (71.95%), Query Frame = 1
Query: 7 SLRNAVKRIEHKERAQPATRKKLGLLEKHKDYVLRARDFGKKRDRMKALKLKASMKNPDEFYFGMHRTKTKGGVHEIDGGTS--LPQDVVQVMKTQDLRYVLTKRAEDEKKADKLRESLHFLDAGPRNKHTIFLDTEEEAERFDPVEHFDTVPELAGRSFNRPRKGTLESAQVTGATSRKQLRKVLKKRDRAYGELSQRLKRAEKMKMAEEHLETQRKVMNSRGTKRKVKEAEGGRPAVFKWKRER 738
SLRN VKR EHKER Q RKKLGLLEKHKDYVLRARD+ KK+DR++ +KLKA+ +NPDEFYF M+ T+T+ GVH + S L + ++V+KTQDL Y+ KRA D +KA+KL + LHF+DA NKHT+F+D+ E+ FD HFDT PELA R+FNR RK TL++ + T +KQLR + K+RD Y EL+ RL RA K++ + L+ +RKV ++G KRKV++ + RP V+KWK+ER
Sbjct: 2 SLRNVVKRREHKERGQLQERKKLGLLEKHKDYVLRARDYNKKQDRLRTMKLKAAFRNPDEFYFKMNTTRTEDGVHVSENNHSEKLSAEALKVLKTQDLAYLHMKRAVDLRKAEKLTQGLHFIDAPKNNKHTVFVDSSEDLNTFDVATHFDTAPELADRAFNRLRKETLKTTTIQATTDKKQLRALTKERDAVYRELNDRLIRATKIQQMSDRLDLERKVQ-AKGKKRKVQDGDSSRPPVYKWKKER 246
BLAST of mRNA_D-mesarthrocarpus_Contig111.2.2 vs. uniprot
Match: A0A4D9DA46_9STRA (U3 small nucleolar RNA-associated protein 11 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DA46_9STRA) HSP 1 Score: 240 bits (613), Expect = 1.180e-72 Identity = 134/247 (54.25%), Postives = 174/247 (70.45%), Query Frame = 1
Query: 4 SSLRNAVKRIEHKERAQPATRKKLGLLEKHKDYVLRARDFGKKRDRMKALKLKASMKNPDEFYFGMHRTKTKGGVHEI-DGGTSLPQDVVQVMKTQDLRYVLTKRAEDEKKADKLRESLHFLDAGPRNKHTIFLDTEEEAERFDPVEHFDTVPELAGRSFNRPRKGTLES-AQVTGATSRKQLRKVLKKRDRAYGELSQRLKRAEKMKMAEEHLETQRKVMNSRGTKRKVKEAEGGRPAVFKWKRER 738
+SLRNA+ R +KER+QPA RKK GLLEKHKDYV RA D+ +K + +L+ KA+ +NPDEFYF M + +TK GVH + SLP D + ++KTQD+RYV KRA D KKA+KL+ LHFL NKHT+F+DTE E E FDP +HF T P L R+FNRP+ TLE+ V G + +L+KV K R++AY EL +RLKR+ K EH++ ++ VM +G KRKV+EAE G+PAVFKWKRER
Sbjct: 4 ASLRNAIPRKTNKERSQPAARKKFGLLEKHKDYVQRANDYKRKSKALASLREKAAFRNPDEFYFAMTKGQTKEGVHRVRPAEASLPHDHIALLKTQDMRYVTMKRALDVKKAEKLQAGLHFLTEEAANKHTVFVDTEAEVETFDPAKHFGTDPALVTRAFNRPKLETLETPGAVLGVANVGELKKVRKAREKAYTELGERLKRSLSFKEVLEHMQVEKNVMG-KGRKRKVQEAEDGKPAVFKWKRER 249
BLAST of mRNA_D-mesarthrocarpus_Contig111.2.2 vs. uniprot
Match: A0A5D6XJY8_9STRA (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJY8_9STRA) HSP 1 Score: 238 bits (608), Expect = 6.360e-72 Identity = 127/248 (51.21%), Postives = 175/248 (70.56%), Query Frame = 1
Query: 7 SLRNAVKRIEHKERAQPATRKKLGLLEKHKDYVLRARDFGKKRDRMKALKLKASMKNPDEFYFGMHRTKTKGGVHEIDG----GTSLPQDVVQVMKTQDLRYVLTKRAEDEKKADKLRESLHFLDAGPRNKHTIFLDTEEEAERFDPVEHFDTVPELAGRSFNRPRKGTLESAQVTGATSRKQLRKVLKKRDRAYGELSQRLKRAEKMKMAEEHLETQRKVMNSRGTKRKVKEAEGGRPAVFKWKRER 738
SLRN VKR EHKER QP RKKLGLLEKHKDYV RARD+ K+DR++ ++LKA+ +NPDEFYF M+ T+T+GGVH D G +L D ++V+KTQD+ Y+ KRA D +KA+KL LHF+DA NKH +F+D+E + +FD HFDT PELA R+FNR R L++ + +S K+++K ++RD Y ELS RL+RA + L+ +RKV ++G K K+K+AE G+PAV++WK++R
Sbjct: 2 SLRNVVKRREHKERGQPQERKKLGLLEKHKDYVKRARDYNSKQDRLRTMQLKAAFRNPDEFYFRMNATRTEGGVHVSDNNRLDGKALTADALKVLKTQDVAYLHLKRAVDMRKAEKLNAGLHFIDAPTANKHVVFVDSEAQLAKFDVAAHFDTAPELADRAFNRVRMDALKTLALPAVSSAKEIKKRNRERDGVYRELSDRLERAATLDRMRAKLDLERKVQ-AKGKKMKIKDAENGQPAVYRWKKQR 248
BLAST of mRNA_D-mesarthrocarpus_Contig111.2.2 vs. uniprot
Match: K3WAT9_GLOUD (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAT9_GLOUD) HSP 1 Score: 236 bits (602), Expect = 4.970e-71 Identity = 131/249 (52.61%), Postives = 177/249 (71.08%), Query Frame = 1
Query: 1 MSSLRNAVKRIEHKERAQPATRKKLGLLEKHKDYVLRARDFGKKRDRMKALKLKASMKNPDEFYFGMHRTKTKGGVHEIDGG--TSLPQDVVQVMKTQDLRYVLTKRAEDEKKADKLRESLHFLDA-GPRNKHTIFLDTEEEAERFDPVEHFDTVPELAGRSFNRPRKGTLESAQVTGATSRKQLRKVLKKRDRAYGELSQRLKRAEKMKMAEEHLETQRKVMNSRGTKRKVKEAEGGRPAVFKWKRER 738
MSSLRN VKR EHKER Q RKKLGLLEKHKDYV RARD+ KK+D +KAL +KA+ +NPDEFYF M+ T+T+ GVH L + ++V+KTQDL Y+ KRA D +KA+KL E LHF+DA G NKH +F+D+++E E FD +HFDTVPE+A R+FNR RK TL++ + +K L+K+ +RD Y EL+ RL+RA + L+ +RKV ++G K K+K+AE G+PAV++WK++R
Sbjct: 1 MSSLRNVVKRREHKERGQLRERKKLGLLEKHKDYVKRARDYNKKQDHLKALAVKAAFRNPDEFYFRMNSTRTEDGVHVSTHNHHKQLSAEALKVLKTQDLAYLHMKRAVDLRKAEKLNEGLHFIDAAGKDNKHVVFVDSKDEVESFDVAKHFDTVPEIADRAFNRLRKDTLKTVSLPAVQDKKTLKKLGIERDAVYRELNDRLQRASTIDRMRAKLDLERKVQ-AKGKKMKIKDAEDGQPAVYRWKKQR 248
BLAST of mRNA_D-mesarthrocarpus_Contig111.2.2 vs. uniprot
Match: A0A7S2W8G3_9STRA (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8G3_9STRA) HSP 1 Score: 229 bits (585), Expect = 2.150e-68 Identity = 128/258 (49.61%), Postives = 179/258 (69.38%), Query Frame = 1
Query: 1 MSSLRNAVKRIEHKERAQPATRKKLGLLEKHKDYVLRARDFGKKRDRMKALKLKASMKNPDEFYFGMHRTKTKGGVHEI---DGGTSLPQDVVQVMKTQDLRYVLTKRAEDEKKADKLRESLHFLDAGPRNKHTIFLDTEEEAERFDPVEHFDTVPELAGRSFNRPRK--------GTLESAQVTGATSRKQLRKVLKKRDRAYGELSQRLKRAEKMKMAEEHLETQRKVMNSRGTKRKVKEAEGGRPAVFKWKRERA 741
M+SLRNA+ R H+ER+Q A+R LGLLEK KDYV RARDF +K ++K L+ KA +NPDEFYFGM KTK GVH DG L D + +MK+QDL Y+ K+A D++K+++L+ LH L P N+HT+FLD ++ E FD EHFDT+PELAGR+FNRPR+ G++ S V +TS KQ +K++K +D+AY +L++RL+R+EK++ + E ++KVM +G KRKV+ + G P V+KWKR+RA
Sbjct: 1 MASLRNALPRRTHRERSQVASRAHLGLLEKKKDYVERARDFQRKTGKIKNLRKKARERNPDEFYFGMVNQKTKDGVHVAERNDGADKLSHDDILLMKSQDLGYLSMKKAVDDRKSERLQSGLHMLLDKPLNQHTVFLDKSKDVETFDAAEHFDTMPELAGRAFNRPRRKAFEADKEGSIASTPVMTSTSSKQYKKIMKSKDKAYEDLAERLERSEKLRKLIQRKEVEKKVMG-KGRKRKVEGSSSGAPPVYKWKRKRA 257
BLAST of mRNA_D-mesarthrocarpus_Contig111.2.2 vs. uniprot
Match: A0A0P1B0R4_PLAHL (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B0R4_PLAHL) HSP 1 Score: 228 bits (580), Expect = 9.230e-68 Identity = 131/249 (52.61%), Postives = 172/249 (69.08%), Query Frame = 1
Query: 1 MSSLRNAVKRIEHKERAQPATRKKLGLLEKHKDYVLRARDFGKKRDRMKALKLKASMKNPDEFYFGMHRTKTKGGVHEIDGG--TSLPQDVVQVMKTQDLRYVLTKRAEDEKKADKLRESLHFLDAGPRNKHTIFLDTEEEAERFDPVEHFDTVPELAGRSFNRPRKGTLESAQVTG-ATSRKQLRKVLKKRDRAYGELSQRLKRAEKMKMAEEHLETQRKVMNSRGTKRKVKEAEGGRPAVFKWKRER 738
MSSLRN VKR EHKER Q R+KLGLLEKHKDYV RA+D+ K+ R+K L+LKA+++NPDEFY MH KT+GGVH SL + ++ +KTQDL Y+ KRA D +KA++L LHF+DA NKHT+F+D +E+ E FD ++FDTVPELA R+FNR R+ LE ++ A S KQ K+ +RD Y EL RL RA+K+ L+ +RKV ++G KRKVK AE G PAV++WK++R
Sbjct: 1 MSSLRNVVKRREHKERGQLRDRRKLGLLEKHKDYVKRAQDYNSKQKRLKMLQLKAALRNPDEFYHRMHNNKTEGGVHISTHNHLKSLSTEALRTLKTQDLAYLHLKRAVDLRKAERLNRGLHFVDAPKDNKHTVFVDDKEQVENFDVAQYFDTVPELADRAFNRIRRRDLEMVELPDMAASPKQKYKMQVERDALYRELRDRLTRAKKIGQMSAKLDLERKVQ-AKGRKRKVKAAENGMPAVYRWKQQR 248
BLAST of mRNA_D-mesarthrocarpus_Contig111.2.2 vs. uniprot
Match: D0NVW8_PHYIT (U3 small nucleolar RNA-associated protein 11 n=14 Tax=Phytophthora TaxID=4783 RepID=D0NVW8_PHYIT) HSP 1 Score: 226 bits (576), Expect = 3.620e-67 Identity = 129/249 (51.81%), Postives = 170/249 (68.27%), Query Frame = 1
Query: 1 MSSLRNAVKRIEHKERAQPATRKKLGLLEKHKDYVLRARDFGKKRDRMKALKLKASMKNPDEFYFGMHRTKTKGGVHEIDGG--TSLPQDVVQVMKTQDLRYVLTKRAEDEKKADKLRESLHFLDAGPRNKHTIFLDTEEEAERFDPVEHFDTVPELAGRSFNRPRKGTLESAQVTG-ATSRKQLRKVLKKRDRAYGELSQRLKRAEKMKMAEEHLETQRKVMNSRGTKRKVKEAEGGRPAVFKWKRER 738
MSSLRN VKR EHKER Q R+KLGLLEKHKDYV RARD+ K+ R+K L+LKA+++NPDEFY M TKT+GGVH S+ + ++ +KTQDL Y+ KRA D +KA++L LHF+DA N HT+F+D EE+ + FD EHFDT PEL R+FNR RK LE+A++ A + KQ K+ ++D Y EL RL RA K+ L+ +RKV ++G K+KVK AE G PAV++WK++R
Sbjct: 1 MSSLRNVVKRREHKERGQLRERRKLGLLEKHKDYVKRARDYNSKQKRLKTLQLKAALRNPDEFYHRMRGTKTEGGVHVSTHNHIKSVETEALRTLKTQDLAYLHMKRAVDLRKAERLNRGLHFVDAPKNNNHTVFVDDEEQVDSFDVAEHFDTAPELVDRAFNRIRKRDLETAELPDLAANPKQKYKMQVEKDAMYRELRDRLARANKLGQMSAKLDLERKVQ-AKGRKKKVKAAENGMPAVYRWKQQR 248
BLAST of mRNA_D-mesarthrocarpus_Contig111.2.2 vs. uniprot
Match: A0A7S0UKD3_9STRA (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UKD3_9STRA) HSP 1 Score: 223 bits (567), Expect = 1.470e-65 Identity = 129/269 (47.96%), Postives = 177/269 (65.80%), Query Frame = 1
Query: 1 MSSLRNAVKRIEHKERAQPATRKKLGLLEKHKDYVLRARDFGKKRDRMKALKLKASMKNPDEFYFGMHRTKTKGGVHEI-DGGTSLPQDVVQVMKTQDLRYVLTKRAEDEKKADKLRESLHFLDA------GPRNKHTIFLDTEEEAERFDPVEHFDTVPELAGRSFNRPRKGTLESAQVTGATSRKQL----------------RKVLKKRDRAYGELSQRLKRAEKMKMAEEHLETQRKVMNSRGTKRKVKEAEGGRPAVFKWKRER 738
MSSLRNAVKRI HKER+QP R+ LG+LEK KDY RA D+ +K DR+KA++ K +MKNPDEFYFGMH +K + G H + L ++V+VMK QDL YV ++ +D KKA+KL+ SLH LDA G + KHTIF+ +++EA FD +HFDT+PE GR+FNR RK +E + +QL +K+ K R AY E+ R +RA+KM+ AE+HL T+ K+++S+G KRK+K E G+PA +KW+R+R
Sbjct: 1 MSSLRNAVKRIAHKERSQPLDRQHLGILEKKKDYKQRAIDYHRKEDRIKAMQQKVAMKNPDEFYFGMHNSKVENGKHRSSEDYRVLDPELVKVMKDQDLSYVRMQKQKDIKKAEKLQASLHLLDADNEDAVGSKRKHTIFVKSKKEASEFDVAQHFDTIPEFEGRAFNRLRKRDIEKLSKNNTSGERQLTTEELHKLRKTEQKLAKKLAKARASAYREMESRRERADKMRTAEDHLITE-KLVSSKGRKRKLKTGEDGKPAQYKWRRKR 268 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig111.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig111.2.2 >prot_D-mesarthrocarpus_Contig111.2.2 ID=prot_D-mesarthrocarpus_Contig111.2.2|Name=mRNA_D-mesarthrocarpus_Contig111.2.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=249bp MSSLRNAVKRIEHKERAQPATRKKLGLLEKHKDYVLRARDFGKKRDRMKAback to top mRNA from alignment at D-mesarthrocarpus_Contig111:604..5039- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig111.2.2 ID=mRNA_D-mesarthrocarpus_Contig111.2.2|Name=mRNA_D-mesarthrocarpus_Contig111.2.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=4436bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig111:604..5039- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig111:604..5039- >mRNA_D-mesarthrocarpus_Contig111.2.2 ID=mRNA_D-mesarthrocarpus_Contig111.2.2|Name=mRNA_D-mesarthrocarpus_Contig111.2.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=747bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig111:604..5039- (Discosporangium mesarthrocarpum MT17_79)back to top |