mRNA_D-mesarthrocarpus_Contig1108.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig1108.2.1
Unique NamemRNA_D-mesarthrocarpus_Contig1108.2.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1108.2.1 vs. uniprot
Match: A0A7V1N948_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V1N948_9DELT)

HSP 1 Score: 493 bits (1270), Expect = 2.150e-167
Identity = 281/523 (53.73%), Postives = 346/523 (66.16%), Query Frame = 1
Query:   16 RESKTQDSERASVGLVVGSREVTAVHCDGEDEQGRPRILAWETIPY--ANPGDLQNGLTAFVDRHQLHGQQCRCTLHPDDYSLRLVERPTNVPDEDLADATRWLIRDLVEFDVETAEVATLTLPEDASRGRTPQMFVIAARHGSILDLAHVIDGSGLRVLGFEIVESTMLALDERMPEIVGGSAVLRFHPKSNVVTVAHDHHLYLTRNLHVDFSQIEAAAEAAQHAEDPTDHSVMESIDPLLLDVQRSLDYYESEYGQAPVSRLMLLPSLLDPSPLLPALQEALRPIKVETYDIGDSFSFPERPPADLHLVLALAAGSAAGSAATRSDRIGRSLVPAAFRQSQGGFGLASVLRVAAAILLLLGGLYGWGHFQLEREDAALLALENHRDRIVDEIEE-RTEQAILAARTTDPEAEIEQLEKERNARVSMLRDMTQRTSRSDASFSRLLAGLARQDLDSIWLEHIVFSHGGDAIRLEGRTLAAEDVPEYLRRLGREAGFASRRFRTFQIERANREDASLVFRLAT 1575
            R SK + S R  VGL V   E+ AV C+GE + GRP ++AWE  P+    P +    L  FV+ + L    CRCTL P DYSLRLVERPTNVPDE+L DATRWL+RDLVEFDVE A++  LT+PED +R RTP+MFV+ ARH  I+DLAH+IDG GLR+ GF+IVES+MLAL+ RMPE+V GSA LR   K++V+TV+    L+L RNLHVD   IE AA+ A    D +D  +M+ +D LLLD+QRSLDYYESEYGQA  SRL L PS +D SPL+P L E  RP++VE YD+   F  PE  P  +  V+ALA GSA          +G SLVPA FR    GFGL + LR+ AA  LL G +      +L  E  AL  LE   DR+   +E  R E+A   A   DP + IE L   R+AR+++LRD+ Q  +R +ASFS LLAGLARQDLD +WLE I  + GGDAI LEGR+L  EDVP  LRRLG E GF SR FRTF+IER N     + FR+AT
Sbjct:    7 RRSKNE-SGRHVVGLAVVQDELIAVACEGEVD-GRPHLVAWERFPFDPTAPAEAGRALQDFVEANDLQNWSCRCTLSPGDYSLRLVERPTNVPDEELIDATRWLVRDLVEFDVEEAQLGILTIPEDGNRARTPRMFVVVARHEPIMDLAHLIDGVGLRLAGFDIVESSMLALESRMPEVVAGSASLRVDDKASVLTVSRHECLFLARNLHVDADAIETAAQNALQDPDGSDSGIMDLLDSLLLDIQRSLDYYESEYGQAAPSRLTLFPSPVDFSPLIPTLSEVFRPLQVEAYDLTRYFEVPEPLPTSVQPVVALAGGSAIAD----PGLLGDSLVPAVFRGLGAGFGLPAALRIVAAAALLFGAISSLSWTRLGEERIALAELEAEHDRLTKRVEALRAEEARRVANAADPRSRIEALRAARDARLALLRDLGQSRNRPEASFSNLLAGLARQDLDDLWLERIEITEGGDAIALEGRSLRPEDVPILLRRLGTEKGFESRDFRTFEIERRNDSLPGVAFRIAT 523          
BLAST of mRNA_D-mesarthrocarpus_Contig1108.2.1 vs. uniprot
Match: A0A2D6MQB1_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D6MQB1_9DELT)

HSP 1 Score: 492 bits (1267), Expect = 5.350e-167
Identity = 271/527 (51.42%), Postives = 363/527 (68.88%), Query Frame = 1
Query:    1 LAFWKRESKTQDSERASVGLVVGSREVTAVHCDGEDEQGRPRILAWETIPYANPGDLQNGLTAFVDRHQLHGQQCRCTLHPDDYSLRLVERPTNVPDEDLADATRWLIRDLVEFDVETAEVATLTLPEDASRGRTPQMFVIAARHGSILDLAHVIDGSGLRVLGFEIVESTMLALDERMPEIVGGSAVLRFHPKSNVVTVAHDHHLYLTRNLHVDFSQIEAAAEAAQHAEDPTDHSVMESIDPLLLDVQRSLDYYESEYGQAPVSRLMLLPSLLDPSPLLPALQEALRPIKVETYDIGDSFSFPERPPADLHLVLALAAGSAAGSAATR-SDRIGRSLVPAAFRQSQGGFGLASVLRVAAAILLLLGGLYGWGHFQLEREDAALLALENHRDRIVDEIEERTEQAILAARTTDPEAEIEQLEKERNARVSMLRDMTQRTSRSDASFSRLLAGLARQDLDSIWLEHIVFSHGGDAIRLEGRTLAAEDVPEYLRRLGREAGFASRRFRTFQIERANREDASLVFRLATL 1578
            + +WK +S     +  +VG+ V    VT V C G+ ++  PRI+AWET    +P D+Q+    FVD + L G   R TL P+DYSLRLVERP+NVPD++L DATRWLIRDL+EFDVE+AE+A L++P+D+SR RTP+MFV+AARH  +L+LA +ID +GLRV GF++VES MLALD RMPE+VGGSAVLR   KS+V+T++++ HLYL R L V    IE AA+ A   +DP   +V+E +DPLLLDVQRSLDYYESEYGQAP SRL LL S ++ +PLLPAL EALRP++VE+Y+    F F E PP+      AL +           ++ +G +LVP+  R  +GGFGL+S + +AA+I LLLG   G   F L++E   L AL+  R  +  EIE    +A   A   DP+ E+E L  +R+  +SMLRD+ +  + SDASFS LLAGLARQDL+ +WLE I F++GG++I +EGR+L A+DVP +LR LGRE  F  RRFR F++ R + +   L FR+ATL
Sbjct:    1 MRWWKAKSSEATGDSTTVGIAVEPDRVTFVACKGDGDE-HPRIIAWETSAIDSPADVQSAAQRFVDENDLQGWPARATLSPEDYSLRLVERPSNVPDDELVDATRWLIRDLIEFDVESAELAILSVPKDSSRARTPRMFVVAARHEPVLELAQMIDAAGLRVSGFDVVESAMLALDTRMPEVVGGSAVLRIGDKSSVLTLSNEAHLYLARTLSVSGDSIEVAAQCALEEDDPASSNVIELLDPLLLDVQRSLDYYESEYGQAPASRLALLASDVEMTPLLPALCEALRPLQVESYEFERFFDFDEAPPSQ-----ALPSXXXXXXXXXXXAEGVGNALVPSILRPQRGGFGLSSAVGIAASIALLLGIYSGISWFMLDKERGELAALDADRAGLSAEIESLHAEAEANAANVDPQGELETLRAQRDIELSMLRDIGRHGASSDASFSTLLAGLARQDLEGVWLERIEFANGGESISIEGRSLQADDVPAFLRGLGREKSFERRRFRQFEMARTD-DTPGLAFRIATL 520          
BLAST of mRNA_D-mesarthrocarpus_Contig1108.2.1 vs. uniprot
Match: A0A7Y3DDC7_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3DDC7_9DELT)

HSP 1 Score: 163 bits (413), Expect = 1.000e-40
Identity = 155/511 (30.33%), Postives = 236/511 (46.18%), Query Frame = 1
Query:   28 TQDSERASVGLVVGSREVTAVHCDGEDEQGRPRILAWETIPYANPGDLQNGLTAFVDRHQLHGQQCRCTLHPDDYSLRLVERPTNVPDEDLADATRWLIRDLVEFDVETAEVATLTLPEDASRGRTPQMFVIAARHGSILDLAHVIDGSGLRVLGFEIVESTMLALDERMPEIVGGSAVLRFHPKSNVVTVAHDHHLYLTRNLHVDFSQIEAAAEAAQHAEDPTDHSVMESIDPLLLDVQRSLDYYESEYGQAPVSRLMLLPSLLDPSPLLPALQEALRPIKVETYDIG---DSFSFPERPPADLHLVLALAAGSAAGSAATR--SDRIGRSLVPAAFRQSQGGFGLASVLRVAAAILLLLGGLYGWGHFQLEREDA------ALLALENHRDRIVDEIEERTEQAILAARTTDPEAEIEQLEKERNARVSMLRDMTQRTSRSDASFSRLLAGLARQDLDSIWLEHIVFSHGGDAIRLEGRTLAAEDVPEYLRRLGREAGFASRRFRTFQI 1527
            ++D+    VG+ VG+     VH    D+  +P +   E +      ++   L+  V  H L G      L PD Y +R +  P  VP+E+LA+A+RW +RDL++FD   A V    +P  AS   T ++F +AAR   +  L  ++  SGL     EI E+ +L L   + E+  G A L   PK ++  V  D  L + R+L  D S +++  EA          S+ E++   LL+VQRSLDY+ES +G+ P  RL +LPS L+   ++  L E   PI V   D+    DS +   +P  D  L    AA  A G +  +  +  +    V  + R    G GL +   VA +++         G +Q  R  A      A LA E  R  + +    R     LAA       EI  L  ER  +  +L  ++     + A FS  L  LAR+   ++WL+ I    GG +I L G   A E+VP +L  L  E  F  + F+ F++
Sbjct:    7 SRDAAAGRVGVAVGADGFALVHAIDTDD--KPVLEVCEFVSCDGEDEVALALSGRVKEHGLEGLPATAILAPDAYVMRTIPAP-EVPEEELAEASRWAMRDLIDFDPMDAVVDVTPIPAMASDA-TARLFAVAAREARVDRLVDLVRESGLEPEAVEIGETALLNLGPLLGEVSEGQAFLHLAPKRSLFGVVRDGALCMARDLVTDLSVLDSDPEAVD--------SLFENV---LLEVQRSLDYFESNFGRVPAQRLWILPSQLELEGMVHFLDENA-PIPVSALDLSRLVDSRTALPQPLQDHALAAFAAAVRAPGVSHFQMWNPTLAAPPVLLSGRTLLKGSGLFTAGLVAVSLI---------GAWQNGRTQATVAGIEAQLAAEESRVSLGEARGARGPDQALAA-------EIAALRSERARKTRVLDALSGGNLGNLAGFSPALEALARKRTPNVWLDRITLRDGGRSIALAGAATAPEEVPSWLSSLSGEPFFERKSFQAFEL 485          
BLAST of mRNA_D-mesarthrocarpus_Contig1108.2.1 vs. uniprot
Match: A0A1I1N8D7_9GAMM (MSHA biogenesis protein MshI n=1 Tax=Thiohalospira halophila DSM 15071 TaxID=1123397 RepID=A0A1I1N8D7_9GAMM)

HSP 1 Score: 142 bits (357), Expect = 5.780e-33
Identity = 133/454 (29.30%), Postives = 197/454 (43.39%), Query Frame = 1
Query:  193 VDRHQLHGQQCRCTLHPDDYSLRLVERPTNVPDEDLADATRWLIRDLVEFDVETAEVATLTLPEDASRGRTPQMFVIAARHGSILDLAHVIDGSGLRVLGFEIVESTMLALDERMPEIVGGSAVLRFHPKSNVVTVAHDHHLYLTRNLHVDFSQIEAAAEAAQHAEDPTDHSVMESIDPLLLDVQRSLDYYESEYGQAPVSRLMLLPSLLDPSPLLPALQEALRPIKVETYDIGDSFSFPERPPADLHLVLALAAGSAAGSAATRSDRIGRSLVPAAFRQSQGGFGLASVLRVAAAILLLLGGLYGWGHFQLEREDAALLALENHRDRIVDEIEERTEQAILAARTTDPE--AEIEQLEKERNARVSMLRDMTQRTSRSDASFSRLLAGLARQDLDSIWLEHIVFSHGGDAIRLEGRTLAAEDVPEYLRRLGREAGFASRRFRTFQIERANRED 1548
            V+R  L G      L    Y L  +E P  VP E++ADA RW + DLV+F  E A +ATL  P+ + RG +  +F        +  +   I  +GL+    E+ ES +  L  R+P+  GG+A L    +  V+ + HD  LYL R L     ++              + S +E ++ + L++QRSLDYYE +   AP +R ++ P+ +D  PL+  +   L  I     ++    +      A+      LAAG A    A   + I         R       LA+ L +   +L  L G  GW   + E +  A+ A  N      DE+ +R     L AR  DPE  AE+E+   E   +      +          FS LL GLA      +WL   V + G  A R EG   AAE VP ++  L     F + RF    ++R  RED
Sbjct:   66 VERLGLGGSPAVAVLDDGAYQLLHLEAP-EVPPEEMADALRWRLGDLVDFPPEEAVIATL--PQHSDRGASRMVFAFVVHRPVVQRVIDTIASAGLQPEAVEVRESALRNLTARIPDEAGGTATLHLCREDGVILLTHDQGLYLARRLEAGTGRL-------------AEGSTLE-MEGIALELQRSLDYYERQLASAPAARALIAPTPMDRGPLIDYINTNLN-IAASALELSHVLNIECEAEAETLSRATLAAGGALR--AETGETIDLHTGHRQQRDYLAPRALAAALLLWLIVLTGLSGTLGWQAHRAEAQAVAVEAELNALRERRDELNQR-----LEAREVDPELEAELERARTELAGQKRFREALDDLEGMGHGGFSPLLTGLADAPPRGLWLRRFVLA-GEGAARFEGSATAAEQVPAFVEGLAASGAFTASRFARMDLQR--RED 491          
BLAST of mRNA_D-mesarthrocarpus_Contig1108.2.1 vs. uniprot
Match: A0A0P7ZDW9_9GAMM (T2bSS MSH-type system platform protein MshI n=1 Tax=Marinobacter sp. HL-58 TaxID=1479237 RepID=A0A0P7ZDW9_9GAMM)

HSP 1 Score: 139 bits (349), Expect = 5.880e-32
Identity = 139/499 (27.86%), Postives = 223/499 (44.69%), Query Frame = 1
Query:  118 RPRILAWET------IPYANPGDLQNGLTAFVDRHQLHGQQCRCTLHPDDYSLRLVERPTNVPDEDLADATRWLIRDLVEFDVETAEVATLTLPEDASRGRTPQMFVIAARHGSILDLAHVIDGSGLRVLGFEIVESTMLALDERMPEIVGGSAVLRFHPKSNVVTVAHDHHLYLTRNLHVDFSQIEAAAEAAQHAEDPTDHSVMESIDPLLLDVQRSLDYYESEYGQAPVS--RLMLLPSLLDPSPLLPALQEALRPIKVETYDIGDSFSFPERPPADLHLVLALAAGSAAGSAATRSDRIGR--SLVPAAFRQSQGGFGLASVLRVAAAILLLLGGLYGWGHFQLEREDAALLALENHRDRIVDEIEERTEQAILAARTTDPE--AEIEQLEKERNARVSMLRDMTQRTSRSDASFSRLLAGLARQDLDSIWLEHIVFSHGGDAIRLEGRTLAAEDVPEYLRRLGREAGFASRRFRTFQIERANREDASLV-FRLAT 1575
            RP  +AW            +P   +  L   V      G      L  D Y +  +ERP  V + +L DA +W ++D ++F+   A       PEDASRGR   + V+AAR   + +L  +++  GL ++  +I E  +  L  R+     G+A++    +   + V     LYL+R L V    +  A+            S   ++  L L++QRSLDYYES+ GQ P S  RL+   ++L  S +L +   A     VET D      F      D      L A SA+   A  SD I +  +L     R  +      + L + A  L+++    G   +Q  +  A  LAL+   +++   +E+ T +  + AR  DPE  A++E++      R  +L  +    +     FS  L+ LARQ  D +WL +I        + L GR  +   VP YL +LG E  F+ + F +F+++R   ED   + F++AT
Sbjct:   24 RPDGIAWAESSGSAGFSDCSPAKREGVLGTLVSDRGWAGADTTLVLPLDQYQVFQLERPEGVDESELGDALKWKLKDFLDFNPSDAVSDVFPFPEDASRGRGKLVNVVAARKSLVSELVALVERCGLALITIDIAELALRKLIPRIDPDHRGAALVHLRERFGQMIVCKGQTLYLSRRLDVTSDDLRDAS------------SQENAVQSLALEMQRSLDYYESQLGQVPPSVIRLVARDNVLPLSSMLASYVAA----GVETLDWA---LFDLEQAVDSRC---LVAWSASLGMAVNSDDISQQVNLYNDDLRPRREKLQAGTALALLALALVVIAVAAGVTRYQESQLQADTLALQQQNEQLRGSVEQLTNE--MEARQPDPEVEADLERVTATLARRQQLLDRVENLIATETTGFSESLSALARQVPDGLWLTNIRLDALHGDVGLAGRAQSGRLVPVYLEQLGNEPAFSGKTFGSFRLDRE--EDGRWIEFQVAT 496          
BLAST of mRNA_D-mesarthrocarpus_Contig1108.2.1 vs. uniprot
Match: A0A6M8W4Z6_9PROT (Uncharacterized protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6M8W4Z6_9PROT)

HSP 1 Score: 132 bits (333), Expect = 4.570e-31
Identity = 88/268 (32.84%), Postives = 143/268 (53.36%), Query Frame = 1
Query:   37 SERASVGLVVGSREVTAVHCDGEDEQGRPRILAWETIPYANPGDLQNGLTAFVDRHQLHGQQCRCTLHPDDYSLRLVERPTNVPDEDLADATRWLIRDLVEFDVETAEVATLTLPEDASRGRTPQMFVIAARHGSILDLAHVIDGSGLRVLGFEIVESTMLALDERMPEIVGGSAVLRFHPKSNVVTVAHDHHLYLTRNLHVDFSQIEAAAEAAQHAEDPTDHSVMESIDPLLLDVQRSLDYYESEYGQAPVSRLMLLPSLLDPSPLL 840
            S     G+ +    ++ VH      QG P+I + E +P     D+   L  +V +H   G+ C   + P  Y L  VE P NV   ++ +A RW I+DLV F VE A +  L LPE  ++GRT   +V+AA    I   A +I G+GL +   +I E  +  + +RMPE   G A+L     ++ + +    +LYL R+++  +SQ+    + +  +  P      + +D ++L++QRSLDYYES +GQ PV+ L++LP++ +P P L
Sbjct:   17 SRSGITGIALSDEGLSLVHAK-PSSQGVPQIDSCEFLPVNGSTDVAAQLADWVAQHDAKGRVCVGVMEPGGYQLLQVE-PPNVEPGEMREAVRWRIKDLVSFSVENAAIDLLHLPEGGTQGRTA--YVVAAEGELIEQRADLILGAGLELRAIDITEMALRNIAQRMPENETGVALLWVGRTTSRIGLYRQSNLYLARSINTGWSQLAGRGDESGLSLAPD----AQLLDGMVLEMQRSLDYYESHFGQNPVNTLVVLPTV-EPVPSL 275          
BLAST of mRNA_D-mesarthrocarpus_Contig1108.2.1 vs. uniprot
Match: UPI001CD9A901 (PilN domain-containing protein n=3 Tax=Marinobacter TaxID=2742 RepID=UPI001CD9A901)

HSP 1 Score: 135 bits (340), Expect = 9.480e-31
Identity = 144/502 (28.69%), Postives = 217/502 (43.23%), Query Frame = 1
Query:  118 RPRILAWET------IPYANPGDLQNGLTAFVDRHQLHGQQCRCTLHPDDYSLRLVERPTNVPDEDLADATRWLIRDLVEFDVETAEVATLTLPEDASRGRTPQMFVIAARHGSILDLAHVIDGSGLRVLGFEIVESTMLALDERMPEIVGGSAVLRFHPKSNVVTVAHDHHLYLTRNLHVDFSQIEAAAEAAQHAEDPTDHSVMES-IDPLLLDVQRSLDYYESEYGQAPVS--RLMLLPSLLDPSPLLPALQEALRPIKVETYD---IGDSFSFPERPPADLHLVLALAAGSAAGSAATRSDRIGRSLVPAAFRQSQGGFGLA-SVLRVAAAILLLLGGLYGWGHFQLEREDAALLALENHRDRIVDEIEERTEQAILAARTTDPEAE--IEQLEKERNARVSMLRDMTQRTSRSDASFSRLLAGLARQDLDSIWLEHIVFSHGGDAIRLEGRTLAAEDVPEYLRRLGREAGFASRRFRTFQIERANREDASLV-FRLAT 1575
            RP  +AW            +P   ++ L A        G      L  D Y +  +ERP  + + +L DA +W ++D ++F+   A       PEDASRGR   + V+AAR   +  L  +++  GL +   +I E  +  L  R+     G+A++    +   + V     LYL+R L V              ++D  D S  ES +  L L++QRSLDYYES+ GQ P S  RL+   ++L  S +L +   A     VET D    G   S   R        LA+ AG   G    + +     L P   RQ +   G+A SVL +A  ++++  G+  +    L+ E AAL                  E     AR  DPE E  +E++      R  +L  +    +     FS  L+ LARQ    +WL HI       A+ L G+  +   VP YL +LG E  F  + F +F+++R   ED   V F +AT
Sbjct:   24 RPDGIAWAESGGSAGFSDCSPAKRESVLGALTSERGWVGADATLILPLDQYQVFQLERPEGIDESELGDALKWKLKDFLDFNPSDAVSDVFHFPEDASRGRGSLVNVVAARKSLVSGLVTLVENCGLALTSIDIAELALRNLVPRIDPASRGTALVHMRERFGQMIVCKGETLYLSRRLDVT-------------SDDLRDASSQESAVQSLALEMQRSLDYYESQLGQVPPSVIRLVARDNVLPLSSMLASYVAA----SVETLDWAPFGLDASLDSRCLLAWSASLAMTAG---GDGVQQVNLYTDDLRP---RQEKLQAGMAMSVLALALVVIVVAAGVAHYQESGLQAETAALQQQNEXXXXXXXXXXXXXE-----ARQPDPEVEAALERVTATLARRQKLLDRVENLIATETTGFSSPLSALARQVPQGLWLTHIRLDASNGAVGLVGKAQSGRLVPVYLEQLGDEPAFMGKTFGSFRLDRG--EDGRWVEFHVAT 495          
BLAST of mRNA_D-mesarthrocarpus_Contig1108.2.1 vs. uniprot
Match: A0A2E8F9G1_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E8F9G1_9GAMM)

HSP 1 Score: 130 bits (328), Expect = 1.950e-30
Identity = 94/290 (32.41%), Postives = 144/290 (49.66%), Query Frame = 1
Query:   25 KTQDSERASVGLVVGSREVTAVHCDGEDEQGRPRILAWETIPYANPGDLQNGLTAFVDRHQLHGQQCRCTLHPDDYSLRLVERPTNVPDEDLADATRWLIRDLVEFDVETAEVATLTLPEDASRGRTPQMFVIAARHGSILDLAHVIDGSGLRVLGFEIVESTMLALDERMPEIVGGSAVLRFHPKSNVVTVAHDHHLYLTRNLHVDFSQIEAAAEAAQHAEDPTDHSVMESIDPLLLDVQRSLDYYESEYGQAPVSRLMLLPSLLDPSPLLPALQEALRPIKVETYDIG 894
            K +DS R  VG+ V S ++   H    + QG P +L  E +   +  +  + L   V +  L G QC   L P DYSL LVE P   PDE L  A RW I+DL++  +E A +    +PE+A RGR+  ++V+AA    I  +  +I  SGL +   +I E  M  L  +  E   G A +      + + +     LYLTR ++   +Q++     +   ED  D         L+L++QRSLDY+ES+ GQ  V+++++     D + +  AL EAL   KV   D+ 
Sbjct:    8 KVKDSGR--VGVTVNSEQLVLAHV--VENQGMPFLLNCERVVLQSEREAGDALEQLVKKLNLVGVQCSFVLSPKDYSLHLVEAPQVEPDE-LKAAVRWKIKDLLDMKIEDAAIDVFEVPENAYRGRSNMVYVVAALKSRIQAIIDMISNSGLELAVIDIPELAMKNLSSQFIEDENGIAFMDLRRTGSTMNLTRGGDLYLTRRIN---TQLDPDVMQSPDWEDLKDR--------LVLEIQRSLDYFESQMGQGQVTQIVIARRQHDTAGMTEALNEALT-AKVTALDLS 280          
BLAST of mRNA_D-mesarthrocarpus_Contig1108.2.1 vs. uniprot
Match: UPI000B1F5C8A (pilus assembly protein PilM n=1 Tax=Neptuniibacter marinus TaxID=1806670 RepID=UPI000B1F5C8A)

HSP 1 Score: 129 bits (323), Expect = 7.920e-30
Identity = 93/333 (27.93%), Postives = 160/333 (48.05%), Query Frame = 1
Query:    1 LAFWKRESKTQDSERASVGLVVGSREVTAVHCDGEDEQGRPRILAWETIPYANPGDLQNGLTAFVDRHQLHGQQCRCTLHPDDYSLRLVERPTNVPDEDLADATRWLIRDLVEFDVETAEVATLTLPEDASRGRTPQMFVIAARHGSILDLAHVIDGSGLRVLGFEIVESTMLALDERMPEIVGGSAVLRFHPKSNVVTVAHDHHLYLTRNLHVDFSQIEAAAEAAQHAEDPTDHSVMESIDPLLLDVQRSLDYYESEYGQAPVSRLMLLPSLLDPSPLLPALQEALRPIKVETYDIGDSFSFPERPPADLHLVLALAAGSAAGSAATRSDRI 999
            L+ +K++ K+         +V   + V+  H   +     P +   E +  +NP +     +  +    L+G      +    Y + LVERP+ VPDE+L DA RW I+DLV FD+E A +  + LP+DA RGR+  ++ +AA+   I       +  GL  +  ++ E  +L L E + +   G A      +S+ + +  D  LY TR  H+ +S+ + AA+A                   +L++QRSLDYYES+ G+ P  RL++LP   D +PL+  L++ L  + + + ++ +  S       DL     +A  +A  S +   DR+
Sbjct:    2 LSLFKKKMKSG----GITSVVFTGKGVSFAHV--KQTASHPELSFCEHVFSSNPLNESARFSELIKDKGLNGNSALIVMPESSYQIHLVERPS-VPDEELRDALRWKIKDLVSFDIEKAVIDYIELPDDAYRGRSRMLYAVAAQQDEIDRRVEWCESIGLEPIVVDVPELALLNLTEDLADTEAGLAAFFLGDESSSINLLSDASLYFTR--HLQYSRTDGAADAGA----------------AVLELQRSLDYYESQVGKPPCVRLLVLPFQSDDTPLMSELRQNLH-LDIHSLNLNNLISSSVELSDDLQQWTTIAVAAALRSESLEVDRV 308          
BLAST of mRNA_D-mesarthrocarpus_Contig1108.2.1 vs. uniprot
Match: A0A7W7Y3R4_9BACT (MSHA biogenesis protein MshI n=1 Tax=Desulfurispira natronophila TaxID=682562 RepID=A0A7W7Y3R4_9BACT)

HSP 1 Score: 129 bits (323), Expect = 1.110e-29
Identity = 84/266 (31.58%), Postives = 135/266 (50.75%), Query Frame = 1
Query:  109 EQGRPRILAWETIPYANPGDLQNGLTAFVDRHQLHGQQCRCTLHPDDYSLRLVERPTNVPDEDLADATRWLIRDLVEFDVETAEVATLTLPEDASRGRTPQMFVIAARHGSILDLAHVIDGSGLRVLGFEIVESTMLALDERMPEIVGGSAVLRFHPKSNVVTVAHDHHLYLTRNLHVDFSQIEAAAEA-AQHAEDPTDHSVMESIDP---LLLDVQRSLDYYESEYGQAPVSRLMLLPSLLDPSPLLPALQEALRPIKVETYDIG 894
            E+GR  +L  + +P A+    +  L  FV RH L G  C   LHP  Y L  V+RP  VP  +LA+A RW ++DL++  V  A +  + LP+DA RGR    + +     ++ +   ++  SGL +   ++ E  +  L   +        VLR   +   +T+     LYL R +    + ++++ +  A   EDP    +  + DP   LLL++QRSLDYYES+ G+  V+R+ ++P  ++    L  LQE L  I +E  DI 
Sbjct:   34 ERGRLELLHCQFLP-ADKSSQREVLRDFVYRHGLAGTSCAVVLHPSQYQLLFVDRPEGVPVAELAEALRWRVKDLIQVPVAEAVIEAIALPQDAFRGRMEMTYAMVTSQQTVQETVRMVKSSGLALKFIDVGEMALRNLGLLLRSADESIGVLRLEEQGGSITLMQSDFLYLCRRIESGLASLQSSEDGEAGIVEDPNFAFLAPASDPAEGLLLEIQRSLDYYESQIGKGTVNRVFVMP--VEAELPLGFLQERLG-IAIERVDIS 295          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1108.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7V1N948_9DELT2.150e-16753.73Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
A0A2D6MQB1_9DELT5.350e-16751.42Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
A0A7Y3DDC7_9DELT1.000e-4030.33Uncharacterized protein n=1 Tax=Myxococcales bacte... [more]
A0A1I1N8D7_9GAMM5.780e-3329.30MSHA biogenesis protein MshI n=1 Tax=Thiohalospira... [more]
A0A0P7ZDW9_9GAMM5.880e-3227.86T2bSS MSH-type system platform protein MshI n=1 Ta... [more]
A0A6M8W4Z6_9PROT4.570e-3132.84Uncharacterized protein n=1 Tax=Proteobacteria bac... [more]
UPI001CD9A9019.480e-3128.69PilN domain-containing protein n=3 Tax=Marinobacte... [more]
A0A2E8F9G1_9GAMM1.950e-3032.41Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
UPI000B1F5C8A7.920e-3027.93pilus assembly protein PilM n=1 Tax=Neptuniibacter... [more]
A0A7W7Y3R4_9BACT1.110e-2931.58MSHA biogenesis protein MshI n=1 Tax=Desulfurispir... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig1108contigD-mesarthrocarpus_Contig1108:6165..7742 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1479237.JMLY01000001_gene1204
Preferred namemshI
Model size1578
Max annot lvl1236|Gammaproteobacteria
KEGG koko:K12279
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.63e-33
EggNOG OGsCOG3166@1|root,COG4972@1|root,COG3166@2|Bacteria,COG4972@2|Bacteria,1N0HS@1224|Proteobacteria,1SAQC@1236|Gammaproteobacteria,46856@72275|Alteromonadaceae
DescriptionPilus assembly protein
Cds size1578
COG categoryNU
BRITEko00000,ko02044
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789235.3909132-CDS-D-mesarthrocarpus_Contig1108:6164..77421680789235.3909132-CDS-D-mesarthrocarpus_Contig1108:6164..7742Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig1108 6165..7742 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig1108.2.1prot_D-mesarthrocarpus_Contig1108.2.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig1108 6165..7742 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig1108.2.1

>prot_D-mesarthrocarpus_Contig1108.2.1 ID=prot_D-mesarthrocarpus_Contig1108.2.1|Name=mRNA_D-mesarthrocarpus_Contig1108.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=526bp
LAFWKRESKTQDSERASVGLVVGSREVTAVHCDGEDEQGRPRILAWETIP
YANPGDLQNGLTAFVDRHQLHGQQCRCTLHPDDYSLRLVERPTNVPDEDL
ADATRWLIRDLVEFDVETAEVATLTLPEDASRGRTPQMFVIAARHGSILD
LAHVIDGSGLRVLGFEIVESTMLALDERMPEIVGGSAVLRFHPKSNVVTV
AHDHHLYLTRNLHVDFSQIEAAAEAAQHAEDPTDHSVMESIDPLLLDVQR
SLDYYESEYGQAPVSRLMLLPSLLDPSPLLPALQEALRPIKVETYDIGDS
FSFPERPPADLHLVLALAAGSAAGSAATRSDRIGRSLVPAAFRQSQGGFG
LASVLRVAAAILLLLGGLYGWGHFQLEREDAALLALENHRDRIVDEIEER
TEQAILAARTTDPEAEIEQLEKERNARVSMLRDMTQRTSRSDASFSRLLA
GLARQDLDSIWLEHIVFSHGGDAIRLEGRTLAAEDVPEYLRRLGREAGFA
SRRFRTFQIERANREDASLVFRLATL
back to top

mRNA from alignment at D-mesarthrocarpus_Contig1108:6165..7742+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig1108.2.1 ID=mRNA_D-mesarthrocarpus_Contig1108.2.1|Name=mRNA_D-mesarthrocarpus_Contig1108.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1578bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1108:6165..7742+ (Discosporangium mesarthrocarpum MT17_79)
TTGGCGTTCTGGAAGCGTGAATCGAAGACCCAAGACAGCGAGCGGGCCAG TGTCGGCCTGGTCGTGGGATCCCGGGAAGTCACCGCCGTCCACTGCGACG GAGAGGACGAGCAGGGACGTCCGCGGATCCTCGCCTGGGAGACGATTCCC TACGCCAATCCCGGAGACCTGCAGAACGGCCTCACGGCCTTCGTCGACCG CCACCAGCTCCATGGGCAGCAGTGTCGATGCACCCTCCACCCCGACGACT ACAGCCTTCGCCTGGTCGAGCGGCCGACCAACGTGCCGGACGAGGATCTC GCGGACGCGACGCGCTGGCTGATCCGGGACCTCGTCGAGTTCGACGTCGA GACCGCCGAGGTCGCGACCCTGACACTCCCCGAGGACGCAAGCCGCGGCC GCACGCCGCAGATGTTCGTCATCGCCGCGCGGCACGGGTCGATCCTCGAC CTCGCCCACGTGATCGACGGATCCGGTCTCAGGGTCCTCGGCTTCGAGAT CGTCGAATCGACGATGCTGGCCCTCGACGAACGCATGCCGGAGATCGTCG GGGGCAGCGCGGTTCTCCGCTTCCACCCGAAATCGAACGTGGTCACGGTC GCCCACGATCACCACCTCTACCTGACGCGCAACCTGCACGTCGACTTCAG CCAGATCGAGGCGGCGGCCGAGGCCGCCCAGCACGCAGAGGACCCCACCG ACCATTCGGTCATGGAGAGCATCGACCCCCTCCTGCTCGACGTGCAGCGC TCGCTCGATTACTACGAGAGCGAGTACGGCCAGGCGCCGGTGTCCAGGCT GATGCTGTTGCCTTCCCTGCTCGATCCCTCTCCCTTGCTTCCAGCGCTTC AGGAGGCACTTCGGCCCATCAAGGTCGAGACCTACGACATCGGGGATTCC TTCTCGTTTCCCGAGAGGCCGCCGGCGGACCTCCATCTCGTCCTCGCCCT CGCCGCGGGATCCGCAGCCGGGTCCGCTGCGACCCGCTCCGACCGGATCG GACGCTCCCTGGTCCCCGCCGCGTTCCGCCAGAGTCAGGGCGGGTTCGGG CTCGCCTCCGTGCTTCGCGTCGCCGCCGCGATCCTCCTGCTGCTCGGCGG CCTCTACGGATGGGGACACTTCCAGCTCGAACGCGAGGATGCGGCCCTGC TCGCCCTCGAGAACCATCGGGACAGGATCGTCGACGAGATCGAGGAGCGA ACGGAGCAGGCGATCCTCGCCGCCCGCACGACGGATCCCGAAGCCGAGAT CGAGCAGCTCGAGAAGGAACGCAACGCGCGGGTCTCGATGCTCCGCGACA TGACGCAACGAACTTCCCGGAGCGACGCCTCGTTCTCCCGACTGCTCGCG GGTCTCGCCCGGCAGGATCTCGACTCGATCTGGCTCGAGCACATCGTCTT CTCCCACGGCGGCGACGCGATCCGCCTCGAGGGGCGCACCCTCGCCGCCG AGGACGTTCCCGAGTATCTGCGACGCCTCGGCCGCGAGGCCGGCTTCGCC TCTCGCCGCTTCCGGACGTTCCAGATCGAACGCGCGAATCGCGAAGACGC CTCCCTCGTCTTCCGGCTCGCGACGCTC
back to top

Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1108:6165..7742+

>mRNA_D-mesarthrocarpus_Contig1108.2.1 ID=mRNA_D-mesarthrocarpus_Contig1108.2.1|Name=mRNA_D-mesarthrocarpus_Contig1108.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1578bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1108:6165..7742+ (Discosporangium mesarthrocarpum MT17_79)
TTGGCGTTCTGGAAGCGTGAATCGAAGACCCAAGACAGCGAGCGGGCCAG
TGTCGGCCTGGTCGTGGGATCCCGGGAAGTCACCGCCGTCCACTGCGACG
GAGAGGACGAGCAGGGACGTCCGCGGATCCTCGCCTGGGAGACGATTCCC
TACGCCAATCCCGGAGACCTGCAGAACGGCCTCACGGCCTTCGTCGACCG
CCACCAGCTCCATGGGCAGCAGTGTCGATGCACCCTCCACCCCGACGACT
ACAGCCTTCGCCTGGTCGAGCGGCCGACCAACGTGCCGGACGAGGATCTC
GCGGACGCGACGCGCTGGCTGATCCGGGACCTCGTCGAGTTCGACGTCGA
GACCGCCGAGGTCGCGACCCTGACACTCCCCGAGGACGCAAGCCGCGGCC
GCACGCCGCAGATGTTCGTCATCGCCGCGCGGCACGGGTCGATCCTCGAC
CTCGCCCACGTGATCGACGGATCCGGTCTCAGGGTCCTCGGCTTCGAGAT
CGTCGAATCGACGATGCTGGCCCTCGACGAACGCATGCCGGAGATCGTCG
GGGGCAGCGCGGTTCTCCGCTTCCACCCGAAATCGAACGTGGTCACGGTC
GCCCACGATCACCACCTCTACCTGACGCGCAACCTGCACGTCGACTTCAG
CCAGATCGAGGCGGCGGCCGAGGCCGCCCAGCACGCAGAGGACCCCACCG
ACCATTCGGTCATGGAGAGCATCGACCCCCTCCTGCTCGACGTGCAGCGC
TCGCTCGATTACTACGAGAGCGAGTACGGCCAGGCGCCGGTGTCCAGGCT
GATGCTGTTGCCTTCCCTGCTCGATCCCTCTCCCTTGCTTCCAGCGCTTC
AGGAGGCACTTCGGCCCATCAAGGTCGAGACCTACGACATCGGGGATTCC
TTCTCGTTTCCCGAGAGGCCGCCGGCGGACCTCCATCTCGTCCTCGCCCT
CGCCGCGGGATCCGCAGCCGGGTCCGCTGCGACCCGCTCCGACCGGATCG
GACGCTCCCTGGTCCCCGCCGCGTTCCGCCAGAGTCAGGGCGGGTTCGGG
CTCGCCTCCGTGCTTCGCGTCGCCGCCGCGATCCTCCTGCTGCTCGGCGG
CCTCTACGGATGGGGACACTTCCAGCTCGAACGCGAGGATGCGGCCCTGC
TCGCCCTCGAGAACCATCGGGACAGGATCGTCGACGAGATCGAGGAGCGA
ACGGAGCAGGCGATCCTCGCCGCCCGCACGACGGATCCCGAAGCCGAGAT
CGAGCAGCTCGAGAAGGAACGCAACGCGCGGGTCTCGATGCTCCGCGACA
TGACGCAACGAACTTCCCGGAGCGACGCCTCGTTCTCCCGACTGCTCGCG
GGTCTCGCCCGGCAGGATCTCGACTCGATCTGGCTCGAGCACATCGTCTT
CTCCCACGGCGGCGACGCGATCCGCCTCGAGGGGCGCACCCTCGCCGCCG
AGGACGTTCCCGAGTATCTGCGACGCCTCGGCCGCGAGGCCGGCTTCGCC
TCTCGCCGCTTCCGGACGTTCCAGATCGAACGCGCGAATCGCGAAGACGC
CTCCCTCGTCTTCCGGCTCGCGACGCTC
back to top