mRNA_D-mesarthrocarpus_Contig11048.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig11048.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig11048.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig11048.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig11048contigD-mesarthrocarpus_Contig11048:545..2201 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size925
Hectar predicted targeting categorysignal anchor
Exons3
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-25_001250.1
Cds size924
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789233.3572772-CDS-D-mesarthrocarpus_Contig11048:544..9311680789233.3572772-CDS-D-mesarthrocarpus_Contig11048:544..931Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig11048 545..931 +
1680789233.3685188-CDS-D-mesarthrocarpus_Contig11048:1064..11961680789233.3685188-CDS-D-mesarthrocarpus_Contig11048:1064..1196Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig11048 1065..1196 +
1680789233.3791482-CDS-D-mesarthrocarpus_Contig11048:1795..22001680789233.3791482-CDS-D-mesarthrocarpus_Contig11048:1795..2200Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig11048 1796..2200 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig11048.1.1prot_D-mesarthrocarpus_Contig11048.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig11048 545..2200 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig11048.1.1

>prot_D-mesarthrocarpus_Contig11048.1.1 ID=prot_D-mesarthrocarpus_Contig11048.1.1|Name=mRNA_D-mesarthrocarpus_Contig11048.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=308bp
FQPNSSPSPNPITLLLYYCYHYYCIVLTLTLTLLLILRLPLLSLCTHPDP
NPMAVLLPHYYCFVLTLTLTLKNQLMYPQLPMQSDLFLQRRFLCGLDQLV
HLFNVLYRYRCNRTTNHRFNFNFNPFTSSVELRCRQLELALESSEAKALS
AAAQSSRLERMLGDARAERQLWEEKRRQQVKTTNAFQATLTPGLTLTLSG
EAPPAGEDRRRLPDCLGHGAPRRWWCPSPPGPSYQLPGPKSSSTYASTPG
LCPREATTPITATGRGEGDRHRWGCGRGGNRLEVWPSWRWRSRERRAQLR
AKAGAGAG
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mRNA from alignment at D-mesarthrocarpus_Contig11048:545..2201+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig11048.1.1 ID=mRNA_D-mesarthrocarpus_Contig11048.1.1|Name=mRNA_D-mesarthrocarpus_Contig11048.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1657bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11048:545..2201+ (Discosporangium mesarthrocarpum MT17_79)
TTCCAACCTAACTCCAGCCCTAGCCCCAACCCTATAACCCTATTGCTGTA
TTACTGCTACCACTATTATTGCATTGTGCTAACCCTAACCCTAACCCTAT
TGCTGATATTACGACTGCCACTGTTATCACTTTGCACTCACCCTGACCCT
AACCCTATGGCTGTCTTACTACCCCACTATTATTGCTTCGTACTAACCCT
AACCCTAACCCTGAAAAATCAATTGATGTATCCTCAGTTACCCATGCAAA
GTGACCTATTCTTGCAGCGCAGGTTTCTTTGCGGGCTGGATCAACTCGTA
CATTTATTCAATGTGTTGTACAGGTACCGATGCAACCGTACAACAAATCA
TCGCTTCAACTTCAACTTCAACCCTTTCACCTCCTCGGTGAGACGGAGCT
TCAGCGCAGGCGGCCGGAGCTAACCCCTGGAGCCAGCCCTCCAAGACCTA
CCCTGGTCCTAACCCCAACTTTTCGATCCCACCCCCCAAGCCTAGCCCTA
ACCCTTTACGTGCGGAATAGGTGGAGCTCCGGTGCCGGCAGCTGGAGCTA
GCCCTGGAGTCCTCTGAGGCGAAGGCTCTGTCAGCGGCGGCCCAGAGCTC
GAGGCTGGAGAGGATGCTCGGGGACGCCCGCGCCGAGAGGCAGCTCTGGG
AGGCAAGTCAACCATAACCCTGTGCCTAACCCTGCTAACTATACCAACCC
TGTGAATTCTGTTGACCCTGTTAACTCTGTTAACCGTTAGGAGGGGGTGC
TTGGGGACACCCGCGCAGGGAGCTCTGGGAGGCAAGCCAACTCTTAACCC
TAGATCTAAGCCTAATCCGATTTAACCCTATTGTTTACCCTATTATTTAC
CCTATTATGGACCCTATTAACTTTGTGAGCCCTGAGGAGAAGATGCTCAT
GGATGCCCGCTCAGAGAGGGCCCTGTGGGAGGCAAACCAAGCCTTACCTG
ACCCTATTTACACTTGGAGAGATGCTGTTCAGGGATGCCCAAGTGGAGAA
GGAGCTCTGGGAGGCAAGCTAAACCTAACCCTAAACCTAAACCTGACCCT
GTTAACCCTGAGGAGGCATAATTTGGGGATGCCCACTCAAAGAGGGAGCT
CTCGGAGACAAGCTAACCCTAACCCTAACCCTAACCTTAACCCTAATGGA
GAAGCACTGCCAACAGGTGAAGACCACCAACATCTTCCTGGCCTCTCTAT
CCCTAATCCTACCACCCTGATTTTACAACACCCTAACCCTAACCCTAACA
GGAGAAGCGCCGCCAGCAGGTGAAGACCACCAACGCATTCCAGGCTACTC
TAACCCCAGGCCTAACCCTAACCCTATCAGGAGAAGCACCACCAGCAGGT
GAAGACCGCCGACGCCTTCCAGACTGCCTTGGGCATGGTGCGCCTCGCAG
GTGGTGGTGCCCCTCCCCCCCCGGCCCCTCCTACCAACTCCCCGGTCCCA
AATCCTCCTCCACCTACGCCTCCACCCCAGGGCTCTGCCCCAGAGAAGCT
ACCACACCCATCACAGCCACAGGGAGAGGAGAAGGTGACAGGCACCGATG
GGGGTGTGGGAGGGGGGGGAATCGGTTGGAGGTATGGCCATCTTGGCGAT
GGCGCTCAAGAGAGAGAAGGGCTCAACTTAGGGCTAAGGCAGGGGCTGGG
GCAGGGG
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig11048:545..2201+

>mRNA_D-mesarthrocarpus_Contig11048.1.1 ID=mRNA_D-mesarthrocarpus_Contig11048.1.1|Name=mRNA_D-mesarthrocarpus_Contig11048.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=924bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11048:545..2201+ (Discosporangium mesarthrocarpum MT17_79)
TTCCAACCTAACTCCAGCCCTAGCCCCAACCCTATAACCCTATTGCTGTA
TTACTGCTACCACTATTATTGCATTGTGCTAACCCTAACCCTAACCCTAT
TGCTGATATTACGACTGCCACTGTTATCACTTTGCACTCACCCTGACCCT
AACCCTATGGCTGTCTTACTACCCCACTATTATTGCTTCGTACTAACCCT
AACCCTAACCCTGAAAAATCAATTGATGTATCCTCAGTTACCCATGCAAA
GTGACCTATTCTTGCAGCGCAGGTTTCTTTGCGGGCTGGATCAACTCGTA
CATTTATTCAATGTGTTGTACAGGTACCGATGCAACCGTACAACAAATCA
TCGCTTCAACTTCAACTTCAACCCTTTCACCTCCTCGGTGGAGCTCCGGT
GCCGGCAGCTGGAGCTAGCCCTGGAGTCCTCTGAGGCGAAGGCTCTGTCA
GCGGCGGCCCAGAGCTCGAGGCTGGAGAGGATGCTCGGGGACGCCCGCGC
CGAGAGGCAGCTCTGGGAGGAGAAGCGCCGCCAGCAGGTGAAGACCACCA
ACGCATTCCAGGCTACTCTAACCCCAGGCCTAACCCTAACCCTATCAGGA
GAAGCACCACCAGCAGGTGAAGACCGCCGACGCCTTCCAGACTGCCTTGG
GCATGGTGCGCCTCGCAGGTGGTGGTGCCCCTCCCCCCCCGGCCCCTCCT
ACCAACTCCCCGGTCCCAAATCCTCCTCCACCTACGCCTCCACCCCAGGG
CTCTGCCCCAGAGAAGCTACCACACCCATCACAGCCACAGGGAGAGGAGA
AGGTGACAGGCACCGATGGGGGTGTGGGAGGGGGGGGAATCGGTTGGAGG
TATGGCCATCTTGGCGATGGCGCTCAAGAGAGAGAAGGGCTCAACTTAGG
GCTAAGGCAGGGGCTGGGGCAGGG
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