mRNA_D-mesarthrocarpus_Contig1104.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1104.1.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 186 bits (471), Expect = 2.150e-52 Identity = 91/180 (50.56%), Postives = 124/180 (68.89%), Query Frame = 2
Query: 212 GALGSTDATHVRWDMAPYMEAVHYTGKEGFPFIAYEVTVDHIGRVLGVAAGFPGAKNDKTMIRFDKLITKIRSKDQYTQLEYTLVDAEGTEYVQRGAYVIVDGGYHMAYLPLLANSRGCKQRN---WNDQLESVHKDVEFFFGRIKSHWRILKLPLQVHMREVIDEIFITCYILHFMLHT 742
GA GSTD TH+ W M PY +A YTGKEG+P +AY+VTVDH RVL V GF G+ NDK++IR+D +TKIR Y++ E+T+ +A+GT Y +G Y++VD GYH ++ L+ S+ +N ++ +LESV KDVE FFG +K +RILKL + H +E ID +F TC ILH MLH+
Sbjct: 228 GATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHK-WVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHS 406
BLAST of mRNA_D-mesarthrocarpus_Contig1104.1.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 180 bits (457), Expect = 4.830e-51 Identity = 89/181 (49.17%), Postives = 122/181 (67.40%), Query Frame = 2
Query: 209 PGALGSTDATHVRWDMAPYMEAVHYTGKEGFPFIAYEVTVDHIGRVLGVAAGFPGAKNDKTMIRFDKLITKIRSKDQYTQLEYTLVDAEGTEYVQRGAYVIVDGGYHMAYLPLLANSRGCKQRN---WNDQLESVHKDVEFFFGRIKSHWRILKLPLQVHMREVIDEIFITCYILHFMLHT 742
PGA+GSTD TH+ W M PY +A YTGKEG P +A++VTVDH GRVL V GF GA NDKT+IR+DK +T+IR+ YT+ +Y L +G ++ ++G Y++VD GYH + L+ S+ R ++ +LES KDVE +FG +K +RI KL + H +E ID +F TC ILH MLH+
Sbjct: 152 PGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHK-WRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHS 331
BLAST of mRNA_D-mesarthrocarpus_Contig1104.1.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE) HSP 1 Score: 177 bits (449), Expect = 3.100e-50 Identity = 92/177 (51.98%), Postives = 112/177 (63.28%), Query Frame = 2
Query: 212 GALGSTDATHVRWDMAPYMEAVHYTGKEGFPFIAYEVTVDHIGRVLGVAAGFPGAKNDKTMIRFDKLITKIRSKDQYTQLEYTLVDAEGTEYVQRGAYVIVDGGYHMAYLPLLANSRGCKQRNWNDQLESVHKDVEFFFGRIKSHWRILKLPLQVHMREVIDEIFITCYILHFMLHT 742
GA GSTD TH+ +M P+ +TGKEGFP IAYEVTVDH GR L V GF G NDKT IR+D + KIR++ QYT+ EY L GTE +RG ++IVD GY+ + + ++ LESV KDVE FFG +K +RILKL + H RE ID IF TC ILH MLHT
Sbjct: 202 GACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYESN----------EDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 368
BLAST of mRNA_D-mesarthrocarpus_Contig1104.1.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 180 bits (457), Expect = 3.280e-50 Identity = 89/181 (49.17%), Postives = 122/181 (67.40%), Query Frame = 2
Query: 209 PGALGSTDATHVRWDMAPYMEAVHYTGKEGFPFIAYEVTVDHIGRVLGVAAGFPGAKNDKTMIRFDKLITKIRSKDQYTQLEYTLVDAEGTEYVQRGAYVIVDGGYHMAYLPLLANSRGCKQRN---WNDQLESVHKDVEFFFGRIKSHWRILKLPLQVHMREVIDEIFITCYILHFMLHT 742
PGA+GSTD TH+ W M PY +A YTGKEG P +A++VTVDH GRVL V GF GA NDKT+IR+DK +T+IR+ YT+ +Y L +G ++ ++G Y++VD GYH + L+ S+ R ++ +LES KDVE +FG +K +RI KL + H +E ID +F TC ILH MLH+
Sbjct: 243 PGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHK-WRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHS 422
BLAST of mRNA_D-mesarthrocarpus_Contig1104.1.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 172 bits (437), Expect = 1.840e-48 Identity = 97/188 (51.60%), Postives = 120/188 (63.83%), Query Frame = 2
Query: 191 HMNVWAPGALGSTDATHVRWDMAPYMEAVHYTGKEGFPFIAYEVTVDHIGRVLGVAAGFPGAKNDKTMIRFDKLITKIRSKDQYTQLEYTLVDAEGTEYVQRGAYVIVDGGYHMAYLPLLANSRGCKQRN----WNDQLESVHKDVEFFFGRIKSHWRILKLPLQVHMREVIDEIFITCYILHFMLHT 742
H W GA GSTD TH+ W+M P+ +TGKEGFP IAY+VTVDH GR L V GF GA NDKT+IR+D + KIR+ QYT+ EY L A GT+ ++RG ++IVD GYH ++ L+A S+ QRN ++ LESV KDV F RILKL + H RE +D IF TC ILH MLHT
Sbjct: 100 HQLGWT-GACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYH-EWVTLIAPSK-YPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHT 276
BLAST of mRNA_D-mesarthrocarpus_Contig1104.1.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 167 bits (424), Expect = 2.250e-47 Identity = 82/179 (45.81%), Postives = 111/179 (62.01%), Query Frame = 2
Query: 212 GALGSTDATHVRWDMAPYMEAVHYTGKEGFPFIAYEVTVDHIGRVLGVAAGFPGAKNDKTMIRFDKLITKIRSKDQYTQLEYTLVDAEGTEYVQRGAYVIVDGGYHMAYLPLLANSRGCKQRN--WNDQLESVHKDVEFFFGRIKSHWRILKLPLQVHMREVIDEIFITCYILHFMLHT 742
GA+GS D TH+ W PY +A YTGKEGFP I Y+VTVDH GR + V GF G+ NDKT + +D + KIR+ QYT+ + + + +GT +G YV+VD GYH + + + + + ++ +LESV KDVE FFG +K RIL L + +E ID +F TC ILH MLHT
Sbjct: 30 GAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHT 208
BLAST of mRNA_D-mesarthrocarpus_Contig1104.1.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE) HSP 1 Score: 166 bits (419), Expect = 4.940e-47 Identity = 87/166 (52.41%), Postives = 109/166 (65.66%), Query Frame = 2
Query: 254 MAPYMEAVHYTGKEGFPFIAYEVTVDHIGRVLGVAAGFPGAKNDKTMIRFDKLITKIRSKDQYTQLEYTLVDAEGTEYVQRGAYVIVDGGYHMAYLPLLANSR---GCKQRNWNDQLESVHKDVEFFFGRIKSHWRILKLPLQVHMREVIDEIFITCYILHFMLHT 742
M P+ +TGKEGFP IAYEVTVDH+GR L V GF GA NDKT+IR+D + IR++ QYT+ EY L GTE +RG ++I+D YH ++ L+A S+ K ++ LESV KDVE FFG +K +RILKL + H RE ID IF TC ILH MLHT
Sbjct: 1 MCPFTLGRSFTGKEGFPTIAYEVTVDHVGRALAVTNGFTGATNDKTIIRYDSGVNNIRTESQYTEREYKLRKVNGTERTRRGCFLIMDNWYH-EWVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 165
BLAST of mRNA_D-mesarthrocarpus_Contig1104.1.1 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE) HSP 1 Score: 173 bits (438), Expect = 1.540e-46 Identity = 99/204 (48.53%), Postives = 123/204 (60.29%), Query Frame = 2
Query: 212 GALGSTDATHVRWDMAPYMEAVHYTGKEGFPFIAYEVTVDHIGRVLGVAAGFPGAKNDKTMIRFDKLITKIRSKDQYTQLEYTLVDAEGTEYVQRGAYVIVDGG----------YH---MAYLP-----------LLANSRGCKQRN---WNDQLESVHKDVEFFFGRIKSHWRILKLPLQVHMREVIDEIFITCYILHFMLHT 742
GA GST+ TH+ W+M P+ +TGKEGFP IA EVTVDH GR L V GF GA NDKT+IR+D + KIR++ QYT+ EY L A GTE +RG ++IVD G +H +A LP L+A S+ + ++ LESV KDVE FFG +K +RILKL + H RE ID IF TC ILH MLHT
Sbjct: 283 GACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNGMSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 486
BLAST of mRNA_D-mesarthrocarpus_Contig1104.1.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE) HSP 1 Score: 163 bits (412), Expect = 3.520e-46 Identity = 82/166 (49.40%), Postives = 114/166 (68.67%), Query Frame = 2
Query: 254 MAPYMEAVHYTGKEGFPFIAYEVTVDHIGRVLGVAAGFPGAKNDKTMIRFDKLITKIRSKDQYTQLEYTLVDAEGTEYVQRGAYVIVDGGYHMAYLPLLANSRGCKQRN---WNDQLESVHKDVEFFFGRIKSHWRILKLPLQVHMREVIDEIFITCYILHFMLHT 742
M PY +A YTGKEG+P +AY+VTVDH RVL V GF G+ NDK++IR+D +TKIR Y++ E+T+ +A+GT Y +G Y++VD GYH ++ L+ S+ +N ++ +LESV KDVE FFG +K +RILKL + H +E ID +F TC ILH MLH+
Sbjct: 1 MCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHK-WVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHS 165
BLAST of mRNA_D-mesarthrocarpus_Contig1104.1.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 166 bits (420), Expect = 3.870e-45 Identity = 82/180 (45.56%), Postives = 114/180 (63.33%), Query Frame = 2
Query: 209 PGALGSTDATHVRWDMAPYMEAVHYTGKEGFPFIAYEVTVDHIGRVLGVAAGFPGAKNDKTMIRFDKLITKIRSKDQYTQLEYTLVDAEGTEYVQRGAYVIVDGGYHMAYLPLLANSRGCKQRN--WNDQLESVHKDVEFFFGRIKSHWRILKLPLQVHMREVIDEIFITCYILHFMLHT 742
PGA+GSTD TH+ W PY + YTGKEG P + Y+VTV+H GRVL V GF G+ NDKT+I D+ + +IR+ QY + +T+ +GT +G Y+IVD GYH + + + + + ++ +LESV KDVE FFG +K +RILKL + +E +D +F TC ILH MLHT
Sbjct: 198 PGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHT 377 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1104.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1104.1.1 >prot_D-mesarthrocarpus_Contig1104.1.1 ID=prot_D-mesarthrocarpus_Contig1104.1.1|Name=mRNA_D-mesarthrocarpus_Contig1104.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=184bp MNVWAPGALGSTDATHVRWDMAPYMEAVHYTGKEGFPFIAYEVTVDHIGRback to top mRNA from alignment at D-mesarthrocarpus_Contig1104:2177..3183+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1104.1.1 ID=mRNA_D-mesarthrocarpus_Contig1104.1.1|Name=mRNA_D-mesarthrocarpus_Contig1104.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1007bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1104:2177..3183+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1104:2177..3183+ >mRNA_D-mesarthrocarpus_Contig1104.1.1 ID=mRNA_D-mesarthrocarpus_Contig1104.1.1|Name=mRNA_D-mesarthrocarpus_Contig1104.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=552bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1104:2177..3183+ (Discosporangium mesarthrocarpum MT17_79)back to top |