mRNA_D-mesarthrocarpus_Contig11029.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-mesarthrocarpus_Contig11029.1.1
Unique NamemRNA_D-mesarthrocarpus_Contig11029.1.1
TypemRNA
OrganismDiscosporangium mesarthrocarpum MT17_79 (Discosporangium mesarthrocarpum MT17_79)
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig11029.1.1 vs. uniprot
Match: D8LRX3_ECTSI (PCI domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRX3_ECTSI)

HSP 1 Score: 355 bits (912), Expect = 2.620e-119
Identity = 180/252 (71.43%), Postives = 202/252 (80.16%), Query Frame = 1
Query:    4 VKEMIPDMELAQRCWVAVSTGGAEAVEGVLATVKERNMSPWYCHLCQQQPALFKRDESLLAAMISANEAEAKRIKEVLEAAEEGGGDMEVLDAQFESARMLARIGEKEKAYSAYMTITDKAKISTGKKIDAIMECTRVGLFHMDVNQVKEGIEKAKKLIEQGGDWDRRNRLKVYEALSLIIARDVRGAAALLLECVSTFTCTELCSYNDFIFYAVITNVLSLPRTSLKKNIVDGPEVLAVINEIPNISRLVN 759
            VKEM+PDM LAQRCWVAV      A   +L TVKERNM PWY  LC Q P+LF  D +L A M   NEAE +RI E L+AAEEG GDMEVLDAQFE A+M AR+G+K  AY+AY TIT+KAKI TGKKIDAIM  TRV  FH+D  QVK G+E AKK+I+ GGDWDRRNRLKVYEAL LI +RD++GAA LLLECVSTFTCTELCSYNDFI Y V+TN+L+LPRT+LKK IVDGPEVLAVINEIPNIS LVN
Sbjct:   36 VKEMVPDMNLAQRCWVAVHQQDPAAAASILDTVKERNMGPWYASLCHQHPSLFPLDAALAAKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKASAYAAYETITEKAKIFTGKKIDAIMAKTRVAFFHLDTPQVKAGLEAAKKMIDLGGDWDRRNRLKVYEALHLITSRDIKGAATLLLECVSTFTCTELCSYNDFILYTVVTNILTLPRTTLKKKIVDGPEVLAVINEIPNISALVN 287          
BLAST of mRNA_D-mesarthrocarpus_Contig11029.1.1 vs. uniprot
Match: A0A835Z177_9STRA (26S proteasome subunit RPN7-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z177_9STRA)

HSP 1 Score: 258 bits (659), Expect = 3.350e-81
Identity = 135/253 (53.36%), Postives = 174/253 (68.77%), Query Frame = 1
Query:    1 KVKEMIPDMELAQRCWVAVSTGGAEA-VEGVLATVKERNMSPWYCHLCQQQPALFKRDESLLAAMISANEAEAKRIKEVLEAAEEGGGDMEVLDAQFESARMLARIGEKEKAYSAYMTITDKAKISTGKKIDAIMECTRVGLFHMDVNQVKEGIEKAKKLIEQGGDWDRRNRLKVYEALSLIIARDVRGAAALLLECVSTFTCTELCSYNDFIFYAVITNVLSLPRTSLKKNIVDGPEVLAVINEIPNISRLV 756
            K  E +PDM +AQ  +V  S  G +   +  +  +  +NM+P+Y  LC + P  F  D++LL  M + N      I    E AE+  GD+EVLDA F  A   ARIG+++ A +A+  I ++AKISTG++IDA M   RVGLFH D+  VKE +  AKKL+E GGDWDRRNRLKVYEA  L++ARD++GAAALLLECV+TFTCTELCSY +FIF AV+TNVL LPRT LKK IVDGPEVL V+  +P++  LV
Sbjct:   24 KPTEQVPDMAVAQLAFVVTSGRGTQDDAKAAMDIITAKNMAPFYKALCAKSPQHFALDDALLQRMEAENAKTLAEIDAAQEMAEKDSGDVEVLDAMFARAAHYARIGDRDAALAAHKAIVERAKISTGRRIDAAMATVRVGLFHSDMPAVKEALASAKKLVEAGGDWDRRNRLKVYEAFYLVLARDMKGAAALLLECVATFTCTELCSYEEFIFVAVVTNVLCLPRTDLKKKIVDGPEVLGVLPSLPHLQALV 276          
BLAST of mRNA_D-mesarthrocarpus_Contig11029.1.1 vs. uniprot
Match: A0A7R9YET5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YET5_9STRA)

HSP 1 Score: 239 bits (609), Expect = 1.770e-73
Identity = 130/256 (50.78%), Postives = 168/256 (65.62%), Query Frame = 1
Query:   10 EMIPDMELAQRCWV--------AVSTGGAEAVEGVLATVKERNMSPWYCHLCQQQPALFKRDESLLAAMISANEAEAKRIKEVLEAAEEGGGDMEVLDAQFESARMLARIGEKEKAYSAYMTITDKAKISTGKKIDAIMECTRVGLFHMDVNQVKEGIEKAKKLIEQGGDWDRRNRLKVYEALSLIIARDVRGAAALLLECVSTFTCTELCSYNDFIFYAVITNVLSLPRTSLKKNIVDGPEVLAVINEIPNISRL 753
            E IPDM LA + ++        A +         V   ++E+NM+P Y   C+     + +DE+L A M +AN AE K  ++   +AE   GDME+LDA F  A+  ARIG+ ++A +AY  I D+ KISTGKKIDA M   R+GLFH   + V E +EKA  L+E GGDWDRRNRLKVY+AL LI ARD+  AAALLLECV TFT TELC+YN+F+FY V+ N L LPR   KK+I+DGPEVLAVIN++P +  L
Sbjct:   33 EQIPDMVLAGKLFLLEAEVPHYAAAIDREAVAAEVQEIIREKNMAPLYAECCRTFG--WTKDEALEAEMRAANAAELKAAEDDKASAETNAGDMEILDAMFRKAKHFARIGDADEALAAYAAIVDQPKISTGKKIDATMAKVRLGLFHRRKDVVAENLEKAHALVEDGGDWDRRNRLKVYQALHLITARDLEAAAALLLECVQTFTATELCTYNEFVFYTVVANTLHLPRPQYKKDIIDGPEVLAVINDLPPLPEL 286          
BLAST of mRNA_D-mesarthrocarpus_Contig11029.1.1 vs. uniprot
Match: A0A4D9CYL3_9STRA (PCI domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYL3_9STRA)

HSP 1 Score: 228 bits (580), Expect = 3.180e-69
Identity = 127/259 (49.03%), Postives = 164/259 (63.32%), Query Frame = 1
Query:    7 KEMIPDMELAQRCWVAVSTGGA--------EAVEGVLATVKERNMSPWYCHLCQQQPALFKRDESLLAAMISANEAEAKRIKEVLEAAEEGGGDMEVLDAQFESARMLARIGEKEKAYSAYMTITDKAKISTGKKIDAIMECTRVGLFHMDVNQVKEGIEKAKKLIEQGGDWDRRNRLKVYEALSLIIARDVRGAAALLLECVSTFTCTELCSYNDFIFYAVITNVLSLPRTSLKKNIVDGPEVLAVINEIPNISRLVN 759
            ++ +PDM LAQ   +               E    VLA +K     P Y  +C ++   +  D +L A + ++NEAE  +I+E L  A E  GDMEVLDA     +  ARIG K  AY+A   I  K KISTGK+IDA M+  R+GLF  D    KE +E+AKKL+E GGDWDRRNRLKVYEA++LI  R ++ AA LLL+C++TFTC EL +Y  FIFYAVITN+L L RT LKK +VDGPEV+AV+ E P + RL+N
Sbjct:   29 RKAVPDMALAQDLHLLELAQSKPDEVPDLEEVTNRVLAVIKAEKAEPLYTSVCVEKLG-WPVDAALQAELKASNEAELAKIEEQLRVATESSGDMEVLDAMIAREKFFARIGNKTAAYAAADEILTKPKISTGKRIDAAMDKVRLGLFFRDTEATKENLERAKKLVEDGGDWDRRNRLKVYEAVALITTRSLKKAAELLLDCIATFTCVELTTYEQFIFYAVITNLLYLERTKLKKKLVDGPEVIAVLREKPALGRLLN 286          
BLAST of mRNA_D-mesarthrocarpus_Contig11029.1.1 vs. uniprot
Match: A0A7S2B949_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B949_9STRA)

HSP 1 Score: 218 bits (554), Expect = 2.290e-65
Identity = 126/249 (50.60%), Postives = 167/249 (67.07%), Query Frame = 1
Query:   19 PDMELAQRCWVAVSTGGAEAVEGVLATVKE----RNMSPWYCHLCQQQPALFKRDESLLAAMISANEAEAKRIKEVLEAAEEGGGDMEVLDAQFESARMLARIGEKEKAYSAYMTITDKAKISTGKKIDAIMECTRVGLFHMDVNQVKEGIEKAKKLIEQGGDWDRRNRLKVYEALSLIIARDVRGAAALLLECVSTFTCTELCSYNDFIFYAVITNVLSLPRTSLKKNIVDGPEVLAVINEIPNISRL 753
            P+M+LAQ  +   +   AE ++G+ A + E      M+P+Y +L  +    F  D++LLA + +AN  E   ++  LE AE+  G+ EVLDA F  A   AR+G+K++AY+A+  I DK K+STGKKIDA M   RV LF MD +  ++ +  AKKL+E GGDWDRRNRLKVYEA+  +I RD + AA LLL+ V+TFTCTELCSY  FIFYAV+TNVL L R  LKK IVDGPEVL VI+ +P +  L
Sbjct:   34 PNMDLAQTVFQLEAAAPAE-LDGLRAQIVEVVRADKMAPYYTYLIGKYG--FAADDALLAELKAANAEELAALQAALEDAEQNHGETEVLDALFGIASFHARVGDKDEAYTAFDIIVDKPKVSTGKKIDASMAKLRVALFFMDTDTARKLLRSAKKLVEDGGDWDRRNRLKVYEAVFFMIERDFKSAAELLLDGVATFTCTELCSYESFIFYAVLTNVLYLKRPELKKKIVDGPEVLGVIH-LPQLDPL 278          
BLAST of mRNA_D-mesarthrocarpus_Contig11029.1.1 vs. uniprot
Match: A0A7S4A7V7_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7V7_9STRA)

HSP 1 Score: 216 bits (551), Expect = 4.010e-65
Identity = 122/248 (49.19%), Postives = 161/248 (64.92%), Query Frame = 1
Query:   19 PDMELAQRCWVAVSTGGAEAVEGVLATVKERNMSPWYCHLCQQQPALF--KRDESLLAAMISANEAEAKRIKEVLEAAEEGGGDMEVLDAQFESARMLARIGEKEKAYSAYMTITDKAKISTGKKIDAIMECTRVGLFHMDVNQVKEGIEKAKKLIEQGGDWDRRNRLKVYEALSLIIARDVRGAAALLLECVSTFTCTELCSYNDFIFYAVITNVLSLPRTSLKKNIVDGPEVLAVINEIPNISRLV 756
            P M LAQ  +         + + +L  V +R M+P+Y  +C    A F   +DESL A M  AN AE   +    E AE   GDMEVLDA F++A+  ARIG+++ AY+A   I ++ KISTGK+IDA+M   RV LF  DV   K+ +E A++L   GGDWDR NRL  YE+  LI+ RD++GAA  LL  V+TFTC ELC+Y +F+FYAV+TNVL+LPR  LKK I+D PEVL VI +IP++S LV
Sbjct:   21 PPMSLAQSVFRHGRNPTPASEKEILDLVTQRQMAPYYARVC----AAFGISKDESLYAKMKDANAAEIAALAAKKEDAEANQGDMEVLDALFDAAKYHARIGDRDGAYAACDVIVERPKISTGKRIDAVMLKIRVALFFDDVGNAKKQLEDARRLAADGGDWDRNNRLSAYESAYLIVTRDLKGAAKKLLGGVATFTCVELCTYPEFVFYAVVTNVLALPRPDLKKRIIDSPEVLQVIKQIPHLSTLV 264          
BLAST of mRNA_D-mesarthrocarpus_Contig11029.1.1 vs. uniprot
Match: A0A7S1U4R5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4R5_9STRA)

HSP 1 Score: 216 bits (550), Expect = 1.060e-64
Identity = 125/256 (48.83%), Postives = 162/256 (63.28%), Query Frame = 1
Query:   10 EMIPDMELAQRCWV--AVSTGGAEAVEG------VLATVKERNMSPWYCHLCQQQPALFKRDESLLAAMISANEAEAKRIKEVLEAAEEGGGDMEVLDAQFESARMLARIGEKEKAYSAYMTITDKAKISTGKKIDAIMECTRVGLFHMDVNQVKEGIEKAKKLIEQGGDWDRRNRLKVYEALSLIIARDVRGAAALLLECVSTFTCTELCSYNDFIFYAVITNVLSLPRTSLKKNIVDGPEVLAVINEIPNISRL 753
            E +P+M LA + ++  A     AE V+       VLA ++E+ M+P Y   C++    +++D +L +AM + N AE     E    AE   GDMEVLDA F  A+  AR+G+ + A  AY  I ++ KISTGKKIDA M   RV LF      V E +E A KL+E+GGDWDRRNRLK Y+AL L+  RD  GAAALLLECV TFT  ELC+Y +FIFY V+TN L LPR   KK+I+DGPEVLAVI ++P +  L
Sbjct:   35 EQVPNMALAAKLFLLDAEVPSYAEPVDTAAVKAEVLAAIEEKRMAPLYKRCCERYG--WEKDAALESAMEADNAAEVAAADEDKANAETNAGDMEVLDALFRKAKHYARVGDIDAALEAYTAIVEQPKISTGKKIDATMAKIRVALFAQRKEAVAELLEAAYKLVEEGGDWDRRNRLKCYDALHLLTVRDFAGAAALLLECVQTFTAVELCTYEEFIFYTVVTNTLHLPRPQYKKDIIDGPEVLAVIKDLPPLQDL 288          
BLAST of mRNA_D-mesarthrocarpus_Contig11029.1.1 vs. uniprot
Match: F0XX66_AURAN (PCI domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XX66_AURAN)

HSP 1 Score: 208 bits (529), Expect = 4.380e-62
Identity = 114/244 (46.72%), Postives = 161/244 (65.98%), Query Frame = 1
Query:   25 MELAQRCWVAVSTGGAEAVEGVLATVKERNMSPWYCHLCQQQPALFKRDESLLAAMISANEAEAKRIKEVLEAAEEGGGDMEVLDAQFESARMLARIGEKEKAYSAYMTITDKAKISTGKKIDAIMECTRVGLFHMDVNQVKEGIEKAKKLIEQGGDWDRRNRLKVYEALSLIIARDVRGAAALLLECVSTFTCTELCSYNDFIFYAVITNVLSLPRTSLKKNIVDGPEVLAVINEIPNISRLV 756
            M LAQ+ +        E  + + AT+++  M P+Y H+C +    +  D +LL  M + N AE   +    E AE+  GDMEVLDA F++ +  AR+G K +AY+A   I D+ KISTGK+IDA+M   RV LF +DV   KE + +AKK+ E GGDWDR NRL VYE++ +II R +  AAA L+  V+TFTC ELC+Y +F+FYAV+TN+LS+ R  LKK ++DGPEVL +I +IP+++ LV
Sbjct:    1 MTLAQQVFRQGREPTPELEKEIRATIEKGEMGPYYEHVCAKFG--WPVDAALLEGMKAKNAAELAALVAKKEDAEKNQGDMEVLDALFDAVKFHARVGAKAEAYAACDAIRDRPKISTGKRIDALMMKIRVSLFFVDVAACKEQLAEAKKMAEDGGDWDRNNRLSVYESVFMIINRSMEDAAAKLISGVATFTCVELCTYPEFVFYAVVTNLLSMSRPELKKKVIDGPEVLQIIKQIPHLTDLV 242          
BLAST of mRNA_D-mesarthrocarpus_Contig11029.1.1 vs. uniprot
Match: A0A7R9WGW2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WGW2_9STRA)

HSP 1 Score: 209 bits (532), Expect = 9.190e-62
Identity = 122/270 (45.19%), Postives = 166/270 (61.48%), Query Frame = 1
Query:   19 PDMELAQRCWVAVSTGGAEA----------------VEGVLATV--KERNMSPWYCHL-----CQQQPALFKRDESLLAAMISANEAEAKRIKEVLEAAEEGGGDMEVLDAQFESARMLARIGEKEKAYSAYMTITDKAKISTGKKIDAIMECTRVGLFHMDVNQVKEGIEKAKKLIEQGGDWDRRNRLKVYEALSLIIARDVRGAAALLLECVSTFTCTELCSYNDFIFYAVITNVLSLPRTSLKKNIVDGPEVLAVINEIPNISRLVN 759
            PDM+LAQ        GG E                  E V+  V  +E      Y HL        +P++   D+  LAAM S ++   + +++ ++ A+E  GDMEVLDA+FE AR  A+   K++A  +Y  +    K+S+GK IDA ME  RV +FH D  +  E I KA KL + GGDWDRRNRLKVY ALS I+ARD++ AA+LL++C++TF+C ELCSY DFI Y +ITN+L LPRT LK+ I+DGPE+L+V N+IP + RLVN
Sbjct:   45 PDMDLAQSIHKLTMLGGPEPHLDADEAKAVGIPDDLTETVMKAVGGEEVENPSLYRHLKSTLGWDARPSVLSDDD--LAAMDSKHKKTLEELEKKVDEAKENAGDMEVLDARFEVARFAAKSLSKDEALESYGKVLALPKLSSGKTIDATMESARVSIFHGDTKKSAELIAKASKLAQDGGDWDRRNRLKVYTALSKILARDIKTAASLLVDCIATFSCNELCSYTDFIVYTIITNILHLPRTELKEKIIDGPEILSVSNDIPVVCRLVN 312          
BLAST of mRNA_D-mesarthrocarpus_Contig11029.1.1 vs. uniprot
Match: A0A7S2DUN5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DUN5_9STRA)

HSP 1 Score: 207 bits (527), Expect = 1.480e-61
Identity = 115/248 (46.37%), Postives = 163/248 (65.73%), Query Frame = 1
Query:    7 KEMIPDMELAQRCWVA-VSTGGAEAVEG----VLATVKERNMSPWYCHLCQQQPALFKRDESLLAAMISANEAEAKRIKEVLEAAEEGGGDMEVLDAQFESARMLARIGEKEKAYSAYMTITDKAKISTGKKIDAIMECTRVGLFHMDVNQVKEGIEKAKKLIEQGGDWDRRNRLKVYEALSLIIARDVRGAAALLLECVSTFTCTELCSYNDFIFYAVITNVLSLPRTSLKKNIVDGPEVLAVINEI 735
            ++  PDM+LAQ+ ++        E +E     +L+ VK+  M+P+Y  LC +    +  D++LLA M +AN  E   +KE +   E+  G+ EVLDA F  A+  ARIG+K +A++AY TI +KAK+STGKKIDA M   RV LF++D +  K+ I+  KKL E GGDWDRRNR+KVYE++  +  RD   +A LLL  +++FTCTE+CSY  F+ YAVITN+L L R  LKK +VDG EVL+V+  +
Sbjct:   10 EKTFPDMDLAQKVFLLECGLDSPEVLEATKTEILSVVKQDAMAPYYEFLCARFS--WNVDDALLAEMTAANTTELAELKETVSGHEQHDGETEVLDALFAIAKFFARIGDKSQAFAAYDTIIEKAKVSTGKKIDAGMHKLRVALFYLDTSAAKKFIDAVKKLAENGGDWDRRNRIKVYESIFRLTERDFSTSAELLLGGLASFTCTEVCSYEKFVQYAVITNLLKLNRPDLKKKVVDGAEVLSVVQSL 255          
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig11029.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRX3_ECTSI2.620e-11971.43PCI domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835Z177_9STRA3.350e-8153.3626S proteasome subunit RPN7-domain-containing prot... [more]
A0A7R9YET5_9STRA1.770e-7350.78Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A4D9CYL3_9STRA3.180e-6949.03PCI domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S2B949_9STRA2.290e-6550.60Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S4A7V7_9STRA4.010e-6549.19Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]
A0A7S1U4R5_9STRA1.060e-6448.83Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
F0XX66_AURAN4.380e-6246.72PCI domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A7R9WGW2_9STRA9.190e-6245.19Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2DUN5_9STRA1.480e-6146.37Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-mesarthrocarpus_Contig11029contigD-mesarthrocarpus_Contig11029:70..3978 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Discosporangium mesarthrocarpum MT17_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LRX3
Preferred nameRPN7
PFAMsPCI,RPN7
Model size759
Max annot lvl2759|Eukaryota
KEGG rclassRC00149
KEGG koko:K00134,ko:K03037,ko:K08869
KEGG ReactionR01061
KEGG Pathwayko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03050,ko04066,ko05010,ko05169,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map03050,map04066,map05010,map05169
KEGG ModuleM00001,M00002,M00003,M00165,M00166,M00308,M00341,M00552
Hectar predicted targeting categoryother localisation
GOsGO:0000502,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016020,GO:0019538,GO:0019941,GO:0030163,GO:0032991,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051603,GO:0071704,GO:0071944,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368,GO:1905369
Exons4
Evalue4.86e-118
EggNOG OGsCOG5187@1|root,KOG0687@2759|Eukaryota
EC1.2.1.12
Descriptionproteasome-mediated ubiquitin-dependent protein catabolic process
Cds size747
COG categoryO
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03051,ko04131,ko04147
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789232.2141929-UTR-D-mesarthrocarpus_Contig11029:69..811680789232.2141929-UTR-D-mesarthrocarpus_Contig11029:69..81Discosporangium mesarthrocarpum MT17_79UTRD-mesarthrocarpus_Contig11029 70..81 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789232.2401147-CDS-D-mesarthrocarpus_Contig11029:81..3001680789232.2401147-CDS-D-mesarthrocarpus_Contig11029:81..300Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig11029 82..300 +
1680789232.2536283-CDS-D-mesarthrocarpus_Contig11029:557..7701680789232.2536283-CDS-D-mesarthrocarpus_Contig11029:557..770Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig11029 558..770 +
1680789232.2653055-CDS-D-mesarthrocarpus_Contig11029:2277..25441680789232.2653055-CDS-D-mesarthrocarpus_Contig11029:2277..2544Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig11029 2278..2544 +
1680789232.2752533-CDS-D-mesarthrocarpus_Contig11029:3930..39781680789232.2752533-CDS-D-mesarthrocarpus_Contig11029:3930..3978Discosporangium mesarthrocarpum MT17_79CDSD-mesarthrocarpus_Contig11029 3931..3978 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-mesarthrocarpus_Contig11029.1.1prot_D-mesarthrocarpus_Contig11029.1.1Discosporangium mesarthrocarpum MT17_79polypeptideD-mesarthrocarpus_Contig11029 82..3978 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-mesarthrocarpus_Contig11029.1.1

>prot_D-mesarthrocarpus_Contig11029.1.1 ID=prot_D-mesarthrocarpus_Contig11029.1.1|Name=mRNA_D-mesarthrocarpus_Contig11029.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=249bp
MIPDMELAQRCWVAVSTGGAEAVEGVLATVKERNMSPWYCHLCQQQPALF
KRDESLLAAMISANEAEAKRIKEVLEAAEEGGGDMEVLDAQFESARMLAR
IGEKEKAYSAYMTITDKAKISTGKKIDAIMECTRVGLFHMDVNQVKEGIE
KAKKLIEQGGDWDRRNRLKVYEALSLIIARDVRGAAALLLECVSTFTCTE
LCSYNDFIFYAVITNVLSLPRTSLKKNIVDGPEVLAVINEIPNISRLVN
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mRNA from alignment at D-mesarthrocarpus_Contig11029:70..3978+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig11029.1.1 ID=mRNA_D-mesarthrocarpus_Contig11029.1.1|Name=mRNA_D-mesarthrocarpus_Contig11029.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3909bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11029:70..3978+ (Discosporangium mesarthrocarpum MT17_79)
AAGGTCAAGGAGATGATTCCGGATATGGAGTTGGCCCAGAGGTGTTGGGT GGCTGTCTCTACCGGAGGGGCTGAGGCAGTGGAGGGGGTCCTGGCAACCG TGAAGGAGCGGAACATGTCCCCATGGTACTGTCACCTGTGCCAACAGCAG CCCGCTCTCTTCAAGAGGGATGAGAGCCTCCTGGCTGCAATGATCTCAGC CAATGAGGCGGAAGCAAAACGAATCAAGGAGGTGAGGCAGGGGAAGAAGG AGGGGGGGGGGTCGAGGAAAAGAGACAGCAACCCTAAGGAAGCGACAACC CCTAACCTAATCTTAACGCTGGTGATATCGTTGAGTGTGAGGCCGAGGTT GTAACATGGGATCCCTGATTGCTGCCATCGGCAAATTGTGCAAAAATCTG ATGATGCTATTCATTTACCCATTGTTGTCCACGGCTCCTTCCCCCCCTGA ATATATTTTAAAACGGAAAAAATGAAAAAACGCAAAAGGTATTGGAGGCA GCGGAGGAAGGGGGGGGGGACATGGAGGTGCTGGATGCCCAGTTCGAGAG TGCCAGGATGTTGGCCAGGATAGGGGAGAAGGAGAAGGCATACTCAGCGT ACATGACCATCACAGACAAGGCCAAGATCTCCACAGGGAAGAAGATCGAT GCTATCATGGAGTGCACAAGGGTTGGCCTCTTCCACATGGATGTCAACCA GGTGAGACAGAGATGGTCATGGGTTTTTGACAACCCTTTTTTTTTTGTTT TCATCGGAGTACTTTCATCAGAGTGTTTTGTTTGGTGAGATCATGGGGAA AGCTTCCAACTTCCCCCCAAAGGAGTACTGTATTTAAGTGTTGCAGCATC CACACCTCCGAATGGCAGTCTGAAGGGGTTAGGGTTAGGGCTAGGGCTTT GCTAATATATCAGGTCAAGTGATCGCAAGGTGGCTGGCAGAGCATCTGAC AATGGGAACCTATAATTAGGCTGAGCACTAATGACCATGGTGAATATGAT ATGAGATGGGGCAGGAGTCACATGACTCTGAAAATATTGAGATGGGGAGC CCTCAATACTACTGTAGTGTGCATCTGTCAGGTTCACCGGGAACATCAGT GTAGTAATAGCTCTGCTGACAGGATCAGCAAACTGAAAAGGATGCCGATG CTGTGGGGGAGACCAAAGCTGTAACTTGTTGTCTGTCATCCATAAATTGC CATATGCAATAGGCACCCTGTGTGTACTCTTTGTTCAGTAAATCGTTGTT AACATTACATCCCTTTTCTTTTTCTTGCTGAGCTCTTAGTTCCTGCGCAT TTGACAAAGGGTGTGGACAAAAATATGTATTACTAGTAATATTCCTACAA GAGCCTATCTCTCCGGGGAAAACTAGTACAGAAAAAGTAGCACTAACATT CAAGTGAGATTCCCACCTCTCTTAAAGGACAGGGGAGGAAGCCCTGACTC AACCACTTGAAGATGGGGCAAAGTGAGTGCTTGGCTTTTTATTCTAGTTT TTGTCAGAAATTTCACTGACCCTGACATCCTTAGACTTGGTGCTGATGTG AGACCGGTTAGGGGGGGAGGGTTGGGGGGGGACAGAGTCAGTGGACAAGC ATCCTAGATATGCATGTTGTGGAACCTTACCCACTCAGAACCAACTATCC TGACTACCAGCGGTGAAGGAAAGAGTTTGAAGAGAGAGGTCATCCATCAA TTCCCACAGTGAACCCGTGTCGTGCTATGTACAGGGAAGATGGGACTCTG CGGGAAACTGTACTGTGACTGTACTGTGACTGTAGGCACGCCTGCCAAGA ACAGTAACAACAGCAGCATCAGCCCCCCCCCCATCCTCCCCTGCAACACG GTGCTACAGAAGTAATTCACCAGTCTTCGCAGCCCTGGATGCAGGTCCAT GCTTCCCTCACAGCCCCTGTCCGTCCCCCCAGGTTATTTTTAATACCCCT CCCCAAGAACCTTTGAAAGAAGAAACCCTTGGAAAAATCAAAAAGGGCTT CAAGCGGCCATCCAATTGCCCCATGGCATGGGAATAGCAGTGTGTTCATG GCCTACCAGACGACCACACACACACACACACACATATGGGCATACACACA CACGCCCTGCCTCCTAACCCCACCCCACCCCACCCCACCCCACCCCACCC CACCCCATCCCCCTTTCACCCATGGTGTCCCCGTGTACCCTTAACCTCTG GAGCTCAGGTGAAGGAGGGCATTGAGAAGGCAAAGAAGCTGATTGAGCAG GGCGGGGACTGGGACCGTCGGAACCGCCTCAAGGTGTACGAGGCCCTGTC TTTGATCATCGCCCGGGATGTGAGGGGGGCAGCGGCCCTCCTCCTGGAGT GCGTGTCTACCTTCACCTGCACCGAGCTGTGCAGCTACAATGACTTCATC TTCTACGCAGTAATCACCAATGTGCTCTCCCTCCCCAGGACCAGCCTCAA GAAGAACATTGTTGACGGCCCAGAGGTGAGGGGGGGGGGGGGGTTGCACA TGCGGCTTTGGTGCGCAAGTGAAGGGTGGGGCTCTTTGACCCGGCGGCTG AAGGAGGAGGGCTGTCACTATCAGCTGAGAGTCAGTTTGTTGCATGTTTG TTTTTGGAGCTCCTCTGGCTTGTTCCTTTGGATCTGATGCCTACCTGGCG TGTGCCTTGTGTTGTTTTTCTGTGCATCACAGTACAGTACATGTATGATG TTATCACCCATTGTTACTTGAGGTGGACTGAGCTCTCTTGTCAAAGGGTT TTTAAGGTAGGTCAGAGCCGCAGTGAGGCTAGTCCATTTTAGGACACCCC TAGTTCTTGCACGATCTTTCCCTTGCTTCTGGCCTAACTATCTGTCAGGT CACTTGTCTGTTTTTGTGATGCACAGACCGTTGGAATAGGCAAGGCAAGT GACTGTCAGGCAGTTAGGCAGAAGCACAGGGAAGATAATCGAGAATGCGC TTGAGAACCTTTGGGGAAGATGCTATGGGTCACAGCTGCAAGGATCGTTC AAAACATAGAGTTGAAAAGGGGCATGGAACAGAGGAGGAAAGCGCTATAG GTAGAGGTGTTAACATGGACGACCCTCGCCACCCTGACCGACCCCGCTCG CCCCTTGACAAGAGAGCTCAGTCCCCATTGGACGCCATCATCATATCTGA AGGGGCATGTCAGTTTGATTCGCTCTCTCCAGTAGACTGGTGTATCAATA GTATTGCTCTAGATATACTCACTTGTTTTATATTTAACTACTCTGCTGAT TACGTGTATTTTATTTGTTGTTCATTTTTGTTTGTTATGTTTCCCTTTCG TGTGCCTTTCCTCTGAACACCATTTTTACTGACTACACTGTGTATTGTTT TTTTTTTTGTTCATTTTGTTTCCCTTTTGTGTTCTTTTCCTCTGAACACC ATTTTTTTTGTGCGTTGTAGAGATCTAGGCAGCCATGACACAAGGTGAGC GGGAGAATAAGATGAGAACAGTCTGAGCCCAGGCCTGTCTGTCGCAGAGA CTTTTGAGGTGCTATTCTGCAACAGAGTTTAACCAGGCTTTGGATTTTGG TTATGCCTAATGGGTCAACCTGTCTCCAATACATTACCTTGAAGTCCTTT ACTTCATTTGTATCTCCGTAGGGCCAACCCTGATGCCTGCCCTGTCTTTA TTTAAAATTGAAAAGACTGCATAGTAGCCCTTCAACCACCACCACCCCCA CAACACACACTCTTATTTTAGTTGATTAACCTTCCCCAACCCCTTGCACA CTCCCAGAATCCACACTGACCCTCCCCCACCCCCCCCCCACCCCCCCCAA CACGCCCGATGTTTATTTTCTCTAAAATGAATTTTTTTTTTTTTTTTAAA AAAAAAAAAAGGTCCTGGCAGTCATCAACGAGATCCCCAACATCTCCCGG CTGGTGAAT
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Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig11029:70..3978+

>mRNA_D-mesarthrocarpus_Contig11029.1.1 ID=mRNA_D-mesarthrocarpus_Contig11029.1.1|Name=mRNA_D-mesarthrocarpus_Contig11029.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=747bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11029:70..3978+ (Discosporangium mesarthrocarpum MT17_79)
ATGATTCCGGATATGGAGTTGGCCCAGAGGTGTTGGGTGGCTGTCTCTAC
CGGAGGGGCTGAGGCAGTGGAGGGGGTCCTGGCAACCGTGAAGGAGCGGA
ACATGTCCCCATGGTACTGTCACCTGTGCCAACAGCAGCCCGCTCTCTTC
AAGAGGGATGAGAGCCTCCTGGCTGCAATGATCTCAGCCAATGAGGCGGA
AGCAAAACGAATCAAGGAGGTATTGGAGGCAGCGGAGGAAGGGGGGGGGG
ACATGGAGGTGCTGGATGCCCAGTTCGAGAGTGCCAGGATGTTGGCCAGG
ATAGGGGAGAAGGAGAAGGCATACTCAGCGTACATGACCATCACAGACAA
GGCCAAGATCTCCACAGGGAAGAAGATCGATGCTATCATGGAGTGCACAA
GGGTTGGCCTCTTCCACATGGATGTCAACCAGGTGAAGGAGGGCATTGAG
AAGGCAAAGAAGCTGATTGAGCAGGGCGGGGACTGGGACCGTCGGAACCG
CCTCAAGGTGTACGAGGCCCTGTCTTTGATCATCGCCCGGGATGTGAGGG
GGGCAGCGGCCCTCCTCCTGGAGTGCGTGTCTACCTTCACCTGCACCGAG
CTGTGCAGCTACAATGACTTCATCTTCTACGCAGTAATCACCAATGTGCT
CTCCCTCCCCAGGACCAGCCTCAAGAAGAACATTGTTGACGGCCCAGAGG
TCCTGGCAGTCATCAACGAGATCCCCAACATCTCCCGGCTGGTGAAT
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