mRNA_D-mesarthrocarpus_Contig11029.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig11029.1.1 vs. uniprot
Match: D8LRX3_ECTSI (PCI domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRX3_ECTSI) HSP 1 Score: 355 bits (912), Expect = 2.620e-119 Identity = 180/252 (71.43%), Postives = 202/252 (80.16%), Query Frame = 1
Query: 4 VKEMIPDMELAQRCWVAVSTGGAEAVEGVLATVKERNMSPWYCHLCQQQPALFKRDESLLAAMISANEAEAKRIKEVLEAAEEGGGDMEVLDAQFESARMLARIGEKEKAYSAYMTITDKAKISTGKKIDAIMECTRVGLFHMDVNQVKEGIEKAKKLIEQGGDWDRRNRLKVYEALSLIIARDVRGAAALLLECVSTFTCTELCSYNDFIFYAVITNVLSLPRTSLKKNIVDGPEVLAVINEIPNISRLVN 759
VKEM+PDM LAQRCWVAV A +L TVKERNM PWY LC Q P+LF D +L A M NEAE +RI E L+AAEEG GDMEVLDAQFE A+M AR+G+K AY+AY TIT+KAKI TGKKIDAIM TRV FH+D QVK G+E AKK+I+ GGDWDRRNRLKVYEAL LI +RD++GAA LLLECVSTFTCTELCSYNDFI Y V+TN+L+LPRT+LKK IVDGPEVLAVINEIPNIS LVN
Sbjct: 36 VKEMVPDMNLAQRCWVAVHQQDPAAAASILDTVKERNMGPWYASLCHQHPSLFPLDAALAAKMKEVNEAEKERISETLKAAEEGEGDMEVLDAQFEMAKMWARVGDKASAYAAYETITEKAKIFTGKKIDAIMAKTRVAFFHLDTPQVKAGLEAAKKMIDLGGDWDRRNRLKVYEALHLITSRDIKGAATLLLECVSTFTCTELCSYNDFILYTVVTNILTLPRTTLKKKIVDGPEVLAVINEIPNISALVN 287
BLAST of mRNA_D-mesarthrocarpus_Contig11029.1.1 vs. uniprot
Match: A0A835Z177_9STRA (26S proteasome subunit RPN7-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z177_9STRA) HSP 1 Score: 258 bits (659), Expect = 3.350e-81 Identity = 135/253 (53.36%), Postives = 174/253 (68.77%), Query Frame = 1
Query: 1 KVKEMIPDMELAQRCWVAVSTGGAEA-VEGVLATVKERNMSPWYCHLCQQQPALFKRDESLLAAMISANEAEAKRIKEVLEAAEEGGGDMEVLDAQFESARMLARIGEKEKAYSAYMTITDKAKISTGKKIDAIMECTRVGLFHMDVNQVKEGIEKAKKLIEQGGDWDRRNRLKVYEALSLIIARDVRGAAALLLECVSTFTCTELCSYNDFIFYAVITNVLSLPRTSLKKNIVDGPEVLAVINEIPNISRLV 756
K E +PDM +AQ +V S G + + + + +NM+P+Y LC + P F D++LL M + N I E AE+ GD+EVLDA F A ARIG+++ A +A+ I ++AKISTG++IDA M RVGLFH D+ VKE + AKKL+E GGDWDRRNRLKVYEA L++ARD++GAAALLLECV+TFTCTELCSY +FIF AV+TNVL LPRT LKK IVDGPEVL V+ +P++ LV
Sbjct: 24 KPTEQVPDMAVAQLAFVVTSGRGTQDDAKAAMDIITAKNMAPFYKALCAKSPQHFALDDALLQRMEAENAKTLAEIDAAQEMAEKDSGDVEVLDAMFARAAHYARIGDRDAALAAHKAIVERAKISTGRRIDAAMATVRVGLFHSDMPAVKEALASAKKLVEAGGDWDRRNRLKVYEAFYLVLARDMKGAAALLLECVATFTCTELCSYEEFIFVAVVTNVLCLPRTDLKKKIVDGPEVLGVLPSLPHLQALV 276
BLAST of mRNA_D-mesarthrocarpus_Contig11029.1.1 vs. uniprot
Match: A0A7R9YET5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YET5_9STRA) HSP 1 Score: 239 bits (609), Expect = 1.770e-73 Identity = 130/256 (50.78%), Postives = 168/256 (65.62%), Query Frame = 1
Query: 10 EMIPDMELAQRCWV--------AVSTGGAEAVEGVLATVKERNMSPWYCHLCQQQPALFKRDESLLAAMISANEAEAKRIKEVLEAAEEGGGDMEVLDAQFESARMLARIGEKEKAYSAYMTITDKAKISTGKKIDAIMECTRVGLFHMDVNQVKEGIEKAKKLIEQGGDWDRRNRLKVYEALSLIIARDVRGAAALLLECVSTFTCTELCSYNDFIFYAVITNVLSLPRTSLKKNIVDGPEVLAVINEIPNISRL 753
E IPDM LA + ++ A + V ++E+NM+P Y C+ + +DE+L A M +AN AE K ++ +AE GDME+LDA F A+ ARIG+ ++A +AY I D+ KISTGKKIDA M R+GLFH + V E +EKA L+E GGDWDRRNRLKVY+AL LI ARD+ AAALLLECV TFT TELC+YN+F+FY V+ N L LPR KK+I+DGPEVLAVIN++P + L
Sbjct: 33 EQIPDMVLAGKLFLLEAEVPHYAAAIDREAVAAEVQEIIREKNMAPLYAECCRTFG--WTKDEALEAEMRAANAAELKAAEDDKASAETNAGDMEILDAMFRKAKHFARIGDADEALAAYAAIVDQPKISTGKKIDATMAKVRLGLFHRRKDVVAENLEKAHALVEDGGDWDRRNRLKVYQALHLITARDLEAAAALLLECVQTFTATELCTYNEFVFYTVVANTLHLPRPQYKKDIIDGPEVLAVINDLPPLPEL 286
BLAST of mRNA_D-mesarthrocarpus_Contig11029.1.1 vs. uniprot
Match: A0A4D9CYL3_9STRA (PCI domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CYL3_9STRA) HSP 1 Score: 228 bits (580), Expect = 3.180e-69 Identity = 127/259 (49.03%), Postives = 164/259 (63.32%), Query Frame = 1
Query: 7 KEMIPDMELAQRCWVAVSTGGA--------EAVEGVLATVKERNMSPWYCHLCQQQPALFKRDESLLAAMISANEAEAKRIKEVLEAAEEGGGDMEVLDAQFESARMLARIGEKEKAYSAYMTITDKAKISTGKKIDAIMECTRVGLFHMDVNQVKEGIEKAKKLIEQGGDWDRRNRLKVYEALSLIIARDVRGAAALLLECVSTFTCTELCSYNDFIFYAVITNVLSLPRTSLKKNIVDGPEVLAVINEIPNISRLVN 759
++ +PDM LAQ + E VLA +K P Y +C ++ + D +L A + ++NEAE +I+E L A E GDMEVLDA + ARIG K AY+A I K KISTGK+IDA M+ R+GLF D KE +E+AKKL+E GGDWDRRNRLKVYEA++LI R ++ AA LLL+C++TFTC EL +Y FIFYAVITN+L L RT LKK +VDGPEV+AV+ E P + RL+N
Sbjct: 29 RKAVPDMALAQDLHLLELAQSKPDEVPDLEEVTNRVLAVIKAEKAEPLYTSVCVEKLG-WPVDAALQAELKASNEAELAKIEEQLRVATESSGDMEVLDAMIAREKFFARIGNKTAAYAAADEILTKPKISTGKRIDAAMDKVRLGLFFRDTEATKENLERAKKLVEDGGDWDRRNRLKVYEAVALITTRSLKKAAELLLDCIATFTCVELTTYEQFIFYAVITNLLYLERTKLKKKLVDGPEVIAVLREKPALGRLLN 286
BLAST of mRNA_D-mesarthrocarpus_Contig11029.1.1 vs. uniprot
Match: A0A7S2B949_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B949_9STRA) HSP 1 Score: 218 bits (554), Expect = 2.290e-65 Identity = 126/249 (50.60%), Postives = 167/249 (67.07%), Query Frame = 1
Query: 19 PDMELAQRCWVAVSTGGAEAVEGVLATVKE----RNMSPWYCHLCQQQPALFKRDESLLAAMISANEAEAKRIKEVLEAAEEGGGDMEVLDAQFESARMLARIGEKEKAYSAYMTITDKAKISTGKKIDAIMECTRVGLFHMDVNQVKEGIEKAKKLIEQGGDWDRRNRLKVYEALSLIIARDVRGAAALLLECVSTFTCTELCSYNDFIFYAVITNVLSLPRTSLKKNIVDGPEVLAVINEIPNISRL 753
P+M+LAQ + + AE ++G+ A + E M+P+Y +L + F D++LLA + +AN E ++ LE AE+ G+ EVLDA F A AR+G+K++AY+A+ I DK K+STGKKIDA M RV LF MD + ++ + AKKL+E GGDWDRRNRLKVYEA+ +I RD + AA LLL+ V+TFTCTELCSY FIFYAV+TNVL L R LKK IVDGPEVL VI+ +P + L
Sbjct: 34 PNMDLAQTVFQLEAAAPAE-LDGLRAQIVEVVRADKMAPYYTYLIGKYG--FAADDALLAELKAANAEELAALQAALEDAEQNHGETEVLDALFGIASFHARVGDKDEAYTAFDIIVDKPKVSTGKKIDASMAKLRVALFFMDTDTARKLLRSAKKLVEDGGDWDRRNRLKVYEAVFFMIERDFKSAAELLLDGVATFTCTELCSYESFIFYAVLTNVLYLKRPELKKKIVDGPEVLGVIH-LPQLDPL 278
BLAST of mRNA_D-mesarthrocarpus_Contig11029.1.1 vs. uniprot
Match: A0A7S4A7V7_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7V7_9STRA) HSP 1 Score: 216 bits (551), Expect = 4.010e-65 Identity = 122/248 (49.19%), Postives = 161/248 (64.92%), Query Frame = 1
Query: 19 PDMELAQRCWVAVSTGGAEAVEGVLATVKERNMSPWYCHLCQQQPALF--KRDESLLAAMISANEAEAKRIKEVLEAAEEGGGDMEVLDAQFESARMLARIGEKEKAYSAYMTITDKAKISTGKKIDAIMECTRVGLFHMDVNQVKEGIEKAKKLIEQGGDWDRRNRLKVYEALSLIIARDVRGAAALLLECVSTFTCTELCSYNDFIFYAVITNVLSLPRTSLKKNIVDGPEVLAVINEIPNISRLV 756
P M LAQ + + + +L V +R M+P+Y +C A F +DESL A M AN AE + E AE GDMEVLDA F++A+ ARIG+++ AY+A I ++ KISTGK+IDA+M RV LF DV K+ +E A++L GGDWDR NRL YE+ LI+ RD++GAA LL V+TFTC ELC+Y +F+FYAV+TNVL+LPR LKK I+D PEVL VI +IP++S LV
Sbjct: 21 PPMSLAQSVFRHGRNPTPASEKEILDLVTQRQMAPYYARVC----AAFGISKDESLYAKMKDANAAEIAALAAKKEDAEANQGDMEVLDALFDAAKYHARIGDRDGAYAACDVIVERPKISTGKRIDAVMLKIRVALFFDDVGNAKKQLEDARRLAADGGDWDRNNRLSAYESAYLIVTRDLKGAAKKLLGGVATFTCVELCTYPEFVFYAVVTNVLALPRPDLKKRIIDSPEVLQVIKQIPHLSTLV 264
BLAST of mRNA_D-mesarthrocarpus_Contig11029.1.1 vs. uniprot
Match: A0A7S1U4R5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4R5_9STRA) HSP 1 Score: 216 bits (550), Expect = 1.060e-64 Identity = 125/256 (48.83%), Postives = 162/256 (63.28%), Query Frame = 1
Query: 10 EMIPDMELAQRCWV--AVSTGGAEAVEG------VLATVKERNMSPWYCHLCQQQPALFKRDESLLAAMISANEAEAKRIKEVLEAAEEGGGDMEVLDAQFESARMLARIGEKEKAYSAYMTITDKAKISTGKKIDAIMECTRVGLFHMDVNQVKEGIEKAKKLIEQGGDWDRRNRLKVYEALSLIIARDVRGAAALLLECVSTFTCTELCSYNDFIFYAVITNVLSLPRTSLKKNIVDGPEVLAVINEIPNISRL 753
E +P+M LA + ++ A AE V+ VLA ++E+ M+P Y C++ +++D +L +AM + N AE E AE GDMEVLDA F A+ AR+G+ + A AY I ++ KISTGKKIDA M RV LF V E +E A KL+E+GGDWDRRNRLK Y+AL L+ RD GAAALLLECV TFT ELC+Y +FIFY V+TN L LPR KK+I+DGPEVLAVI ++P + L
Sbjct: 35 EQVPNMALAAKLFLLDAEVPSYAEPVDTAAVKAEVLAAIEEKRMAPLYKRCCERYG--WEKDAALESAMEADNAAEVAAADEDKANAETNAGDMEVLDALFRKAKHYARVGDIDAALEAYTAIVEQPKISTGKKIDATMAKIRVALFAQRKEAVAELLEAAYKLVEEGGDWDRRNRLKCYDALHLLTVRDFAGAAALLLECVQTFTAVELCTYEEFIFYTVVTNTLHLPRPQYKKDIIDGPEVLAVIKDLPPLQDL 288
BLAST of mRNA_D-mesarthrocarpus_Contig11029.1.1 vs. uniprot
Match: F0XX66_AURAN (PCI domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XX66_AURAN) HSP 1 Score: 208 bits (529), Expect = 4.380e-62 Identity = 114/244 (46.72%), Postives = 161/244 (65.98%), Query Frame = 1
Query: 25 MELAQRCWVAVSTGGAEAVEGVLATVKERNMSPWYCHLCQQQPALFKRDESLLAAMISANEAEAKRIKEVLEAAEEGGGDMEVLDAQFESARMLARIGEKEKAYSAYMTITDKAKISTGKKIDAIMECTRVGLFHMDVNQVKEGIEKAKKLIEQGGDWDRRNRLKVYEALSLIIARDVRGAAALLLECVSTFTCTELCSYNDFIFYAVITNVLSLPRTSLKKNIVDGPEVLAVINEIPNISRLV 756
M LAQ+ + E + + AT+++ M P+Y H+C + + D +LL M + N AE + E AE+ GDMEVLDA F++ + AR+G K +AY+A I D+ KISTGK+IDA+M RV LF +DV KE + +AKK+ E GGDWDR NRL VYE++ +II R + AAA L+ V+TFTC ELC+Y +F+FYAV+TN+LS+ R LKK ++DGPEVL +I +IP+++ LV
Sbjct: 1 MTLAQQVFRQGREPTPELEKEIRATIEKGEMGPYYEHVCAKFG--WPVDAALLEGMKAKNAAELAALVAKKEDAEKNQGDMEVLDALFDAVKFHARVGAKAEAYAACDAIRDRPKISTGKRIDALMMKIRVSLFFVDVAACKEQLAEAKKMAEDGGDWDRNNRLSVYESVFMIINRSMEDAAAKLISGVATFTCVELCTYPEFVFYAVVTNLLSMSRPELKKKVIDGPEVLQIIKQIPHLTDLV 242
BLAST of mRNA_D-mesarthrocarpus_Contig11029.1.1 vs. uniprot
Match: A0A7R9WGW2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WGW2_9STRA) HSP 1 Score: 209 bits (532), Expect = 9.190e-62 Identity = 122/270 (45.19%), Postives = 166/270 (61.48%), Query Frame = 1
Query: 19 PDMELAQRCWVAVSTGGAEA----------------VEGVLATV--KERNMSPWYCHL-----CQQQPALFKRDESLLAAMISANEAEAKRIKEVLEAAEEGGGDMEVLDAQFESARMLARIGEKEKAYSAYMTITDKAKISTGKKIDAIMECTRVGLFHMDVNQVKEGIEKAKKLIEQGGDWDRRNRLKVYEALSLIIARDVRGAAALLLECVSTFTCTELCSYNDFIFYAVITNVLSLPRTSLKKNIVDGPEVLAVINEIPNISRLVN 759
PDM+LAQ GG E E V+ V +E Y HL +P++ D+ LAAM S ++ + +++ ++ A+E GDMEVLDA+FE AR A+ K++A +Y + K+S+GK IDA ME RV +FH D + E I KA KL + GGDWDRRNRLKVY ALS I+ARD++ AA+LL++C++TF+C ELCSY DFI Y +ITN+L LPRT LK+ I+DGPE+L+V N+IP + RLVN
Sbjct: 45 PDMDLAQSIHKLTMLGGPEPHLDADEAKAVGIPDDLTETVMKAVGGEEVENPSLYRHLKSTLGWDARPSVLSDDD--LAAMDSKHKKTLEELEKKVDEAKENAGDMEVLDARFEVARFAAKSLSKDEALESYGKVLALPKLSSGKTIDATMESARVSIFHGDTKKSAELIAKASKLAQDGGDWDRRNRLKVYTALSKILARDIKTAASLLVDCIATFSCNELCSYTDFIVYTIITNILHLPRTELKEKIIDGPEILSVSNDIPVVCRLVN 312
BLAST of mRNA_D-mesarthrocarpus_Contig11029.1.1 vs. uniprot
Match: A0A7S2DUN5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DUN5_9STRA) HSP 1 Score: 207 bits (527), Expect = 1.480e-61 Identity = 115/248 (46.37%), Postives = 163/248 (65.73%), Query Frame = 1
Query: 7 KEMIPDMELAQRCWVA-VSTGGAEAVEG----VLATVKERNMSPWYCHLCQQQPALFKRDESLLAAMISANEAEAKRIKEVLEAAEEGGGDMEVLDAQFESARMLARIGEKEKAYSAYMTITDKAKISTGKKIDAIMECTRVGLFHMDVNQVKEGIEKAKKLIEQGGDWDRRNRLKVYEALSLIIARDVRGAAALLLECVSTFTCTELCSYNDFIFYAVITNVLSLPRTSLKKNIVDGPEVLAVINEI 735
++ PDM+LAQ+ ++ E +E +L+ VK+ M+P+Y LC + + D++LLA M +AN E +KE + E+ G+ EVLDA F A+ ARIG+K +A++AY TI +KAK+STGKKIDA M RV LF++D + K+ I+ KKL E GGDWDRRNR+KVYE++ + RD +A LLL +++FTCTE+CSY F+ YAVITN+L L R LKK +VDG EVL+V+ +
Sbjct: 10 EKTFPDMDLAQKVFLLECGLDSPEVLEATKTEILSVVKQDAMAPYYEFLCARFS--WNVDDALLAEMTAANTTELAELKETVSGHEQHDGETEVLDALFAIAKFFARIGDKSQAFAAYDTIIEKAKVSTGKKIDAGMHKLRVALFYLDTSAAKKFIDAVKKLAENGGDWDRRNRIKVYESIFRLTERDFSTSAELLLGGLASFTCTEVCSYEKFVQYAVITNLLKLNRPDLKKKVVDGAEVLSVVQSL 255 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig11029.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig11029.1.1 >prot_D-mesarthrocarpus_Contig11029.1.1 ID=prot_D-mesarthrocarpus_Contig11029.1.1|Name=mRNA_D-mesarthrocarpus_Contig11029.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=249bp MIPDMELAQRCWVAVSTGGAEAVEGVLATVKERNMSPWYCHLCQQQPALFback to top mRNA from alignment at D-mesarthrocarpus_Contig11029:70..3978+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig11029.1.1 ID=mRNA_D-mesarthrocarpus_Contig11029.1.1|Name=mRNA_D-mesarthrocarpus_Contig11029.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3909bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11029:70..3978+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig11029:70..3978+ >mRNA_D-mesarthrocarpus_Contig11029.1.1 ID=mRNA_D-mesarthrocarpus_Contig11029.1.1|Name=mRNA_D-mesarthrocarpus_Contig11029.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=747bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig11029:70..3978+ (Discosporangium mesarthrocarpum MT17_79)back to top |