mRNA_D-mesarthrocarpus_Contig10945.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10945.2.1 vs. uniprot
Match: A0A3Q4G710_NEOBR (Uncharacterized protein n=1 Tax=Neolamprologus brichardi TaxID=32507 RepID=A0A3Q4G710_NEOBR) HSP 1 Score: 79.3 bits (194), Expect = 1.830e-17 Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 1
Query: 1 HSDFVLDVRYDYYGKRLATCSADQGYAFCCLVLTCSNFPHAASVLGYFMWQGMIWRLAWAHPEFGQIIATCSADRMVKIW 240
H D + DV YD++G+R+ATCS+DQ LVL + G +WR+ WAHPEFGQ++A+CS DR +W
Sbjct: 11 HKDLIHDVSYDFHGRRMATCSSDQSVKVSSLVLVAHD--------------GSVWRVTWAHPEFGQVLASCSFDRTAAVW 76
BLAST of mRNA_D-mesarthrocarpus_Contig10945.2.1 vs. uniprot
Match: A0A7S3D420_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D420_9EUKA) HSP 1 Score: 81.6 bits (200), Expect = 9.930e-17 Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = 1
Query: 1 HSDFVLDVRYDYYGKRLATCSADQGYAFCCLVLTCSNFPHAASVLGYFMWQGMIWRLAWAHPEFGQIIATCSADRMVKIW 240
H D + D ++DYYGKRLATCS+D+ C ++ N A +LG+ +G +W+L+WAHP+FG +I +C DR V +W
Sbjct: 12 HQDMIHDAQFDYYGKRLATCSSDK--KICIFDVSGENHTKVAELLGH---EGPVWQLSWAHPKFGSMIVSCGYDRKVIVW 86
BLAST of mRNA_D-mesarthrocarpus_Contig10945.2.1 vs. uniprot
Match: A0A022Q193_ERYGU (Uncharacterized protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022Q193_ERYGU) HSP 1 Score: 81.3 bits (199), Expect = 1.350e-16 Identity = 39/80 (48.75%), Postives = 52/80 (65.00%), Query Frame = 1
Query: 1 HSDFVLDVRYDYYGKRLATCSADQGYAFCCLVLTCSNFPHAASVLGYFMWQGMIWRLAWAHPEFGQIIATCSADRMVKIW 240
H D V DV DYYGKRLAT S+D + +T SN H A++ G+ QG +W++AWAHP+FG ++A+CS D V IW
Sbjct: 10 HQDIVHDVTMDYYGKRLATASSDNTIKI--IGVTTSNSQHLATLTGH---QGPVWQVAWAHPKFGSLLASCSYDGKVIIW 84
BLAST of mRNA_D-mesarthrocarpus_Contig10945.2.1 vs. uniprot
Match: A0A388KC73_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KC73_CHABU) HSP 1 Score: 80.1 bits (196), Expect = 3.460e-16 Identity = 39/80 (48.75%), Postives = 51/80 (63.75%), Query Frame = 1
Query: 1 HSDFVLDVRYDYYGKRLATCSADQGYAFCCLVLTCSNFPHAASVLGYFMWQGMIWRLAWAHPEFGQIIATCSADRMVKIW 240
HSD V DV+ DYYGKRLATCS+D+ + H A + G+ +G IW +AWAHP+FG ++A+CS DR V IW
Sbjct: 12 HSDVVHDVQLDYYGKRLATCSSDRLVKI--FNVAGDQQSHVADLAGH---EGPIWEVAWAHPKFGNLLASCSYDRRVIIW 86
BLAST of mRNA_D-mesarthrocarpus_Contig10945.2.1 vs. uniprot
Match: UPI000CEAB35F (nucleoporin SEH1 n=1 Tax=Salvelinus alpinus TaxID=8036 RepID=UPI000CEAB35F) HSP 1 Score: 75.5 bits (184), Expect = 3.570e-16 Identity = 33/80 (41.25%), Postives = 47/80 (58.75%), Query Frame = 1
Query: 1 HSDFVLDVRYDYYGKRLATCSADQGYAFCCLVLTCSNFPHAASVLGYFMWQGMIWRLAWAHPEFGQIIATCSADRMVKIW 240
H D + DV YD++G+R+ATCS+DQ V S+ + G +WR+ WAHPEFGQ++A+CS DR +W
Sbjct: 11 HKDLIHDVSYDFHGRRMATCSSDQSVK----VWDKSDNGEWNCTASWKTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVW 86
BLAST of mRNA_D-mesarthrocarpus_Contig10945.2.1 vs. uniprot
Match: A9NQI2_PICSI (Uncharacterized protein n=3 Tax=Picea sitchensis TaxID=3332 RepID=A9NQI2_PICSI) HSP 1 Score: 80.1 bits (196), Expect = 4.500e-16 Identity = 41/81 (50.62%), Postives = 53/81 (65.43%), Query Frame = 1
Query: 1 HSDFVLDVRYDYYGKRLATCSADQGYAFCCLVLTCSNFPHA-ASVLGYFMWQGMIWRLAWAHPEFGQIIATCSADRMVKIW 240
H D V DV DYYGKR+ATCSAD+ L S+ P AS+ G+ +G +W++AWAHP+FG I+A+CS DR V IW
Sbjct: 17 HQDVVHDVTMDYYGKRIATCSADRTIKL--FGLNASDTPTLLASLTGH---EGPVWQVAWAHPKFGSILASCSYDRRVIIW 92
BLAST of mRNA_D-mesarthrocarpus_Contig10945.2.1 vs. uniprot
Match: A0A7S1MVM2_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1MVM2_HEMAN) HSP 1 Score: 79.7 bits (195), Expect = 6.750e-16 Identity = 37/80 (46.25%), Postives = 53/80 (66.25%), Query Frame = 1
Query: 1 HSDFVLDVRYDYYGKRLATCSADQGYAFCCLVLTCSNFPHAASVLGYFMWQGMIWRLAWAHPEFGQIIATCSADRMVKIW 240
H D + D++ DYYGKRLATCS+D + N +AS++G+ +G IW++AWAHP+FG I+A+CS DR V +W
Sbjct: 26 HEDMIHDLQLDYYGKRLATCSSDATIKVFEVGPENGNQTLSASIVGH---EGPIWQIAWAHPKFGAILASCSYDRRVCVW 102
BLAST of mRNA_D-mesarthrocarpus_Contig10945.2.1 vs. uniprot
Match: A0A2K1INW9_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1INW9_PHYPA) HSP 1 Score: 79.3 bits (194), Expect = 7.460e-16 Identity = 41/82 (50.00%), Postives = 54/82 (65.85%), Query Frame = 1
Query: 1 HSDFVLDVRYDYYGKRLATCSADQGYAFCCLVLTCSNFPHAA--SVLGYFMWQGMIWRLAWAHPEFGQIIATCSADRMVKIW 240
H D V DV DYYGKRLATCS+D+ L + S P +A ++ G+ +G IW++AWAHP+FG I+A+CS DR V IW
Sbjct: 14 HQDVVHDVAVDYYGKRLATCSSDRLVKVFALGASGSTPPSSALATLSGH---EGPIWQVAWAHPKFGNILASCSYDRKVIIW 92
BLAST of mRNA_D-mesarthrocarpus_Contig10945.2.1 vs. uniprot
Match: UPI001643D874 (nucleoporin SEH1 n=1 Tax=Neolamprologus brichardi TaxID=32507 RepID=UPI001643D874) HSP 1 Score: 75.1 bits (183), Expect = 9.460e-16 Identity = 33/80 (41.25%), Postives = 46/80 (57.50%), Query Frame = 1
Query: 1 HSDFVLDVRYDYYGKRLATCSADQGYAFCCLVLTCSNFPHAASVLGYFMWQGMIWRLAWAHPEFGQIIATCSADRMVKIW 240
H D + DV YD++G+R+ATCS+DQ V S + G +WR+ WAHPEFGQ++A+CS DR +W
Sbjct: 11 HKDLIHDVSYDFHGRRMATCSSDQSVK----VWDKSENGEWHCTASWKTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVW 86
BLAST of mRNA_D-mesarthrocarpus_Contig10945.2.1 vs. uniprot
Match: A0A0D6R9Q3_ARACU (Uncharacterized protein n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R9Q3_ARACU) HSP 1 Score: 79.0 bits (193), Expect = 1.060e-15 Identity = 38/80 (47.50%), Postives = 52/80 (65.00%), Query Frame = 1
Query: 1 HSDFVLDVRYDYYGKRLATCSADQGYAFCCLVLTCSNFPHAASVLGYFMWQGMIWRLAWAHPEFGQIIATCSADRMVKIW 240
H D V D+ DYYGKRLATCSAD+ L T N A++ G+ +G +W++AWAHP+FG ++A+CS DR V +W
Sbjct: 17 HQDVVHDIAIDYYGKRLATCSADRTIKLFGLS-TSDNPTPLATLTGH---EGPVWQVAWAHPKFGSLLASCSYDRRVIVW 92 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10945.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10945.2.1 >prot_D-mesarthrocarpus_Contig10945.2.1 ID=prot_D-mesarthrocarpus_Contig10945.2.1|Name=mRNA_D-mesarthrocarpus_Contig10945.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=80bp HSDFVLDVRYDYYGKRLATCSADQGYAFCCLVLTCSNFPHAASVLGYFMWback to top mRNA from alignment at D-mesarthrocarpus_Contig10945:2424..3349+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10945.2.1 ID=mRNA_D-mesarthrocarpus_Contig10945.2.1|Name=mRNA_D-mesarthrocarpus_Contig10945.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=926bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10945:2424..3349+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10945:2424..3349+ >mRNA_D-mesarthrocarpus_Contig10945.2.1 ID=mRNA_D-mesarthrocarpus_Contig10945.2.1|Name=mRNA_D-mesarthrocarpus_Contig10945.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=240bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10945:2424..3349+ (Discosporangium mesarthrocarpum MT17_79)back to top |