mRNA_D-mesarthrocarpus_Contig10944.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10944.1.1 vs. uniprot
Match: A0A6H5KCZ9_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCZ9_9PHAE) HSP 1 Score: 71.2 bits (173), Expect = 3.920e-12 Identity = 34/79 (43.04%), Postives = 48/79 (60.76%), Query Frame = 1
Query: 4 VRRRTPFEVWTGRIPKLHHLKVSGATAFVHVETRKTKLLQRGWEGRFVGHSIDSPAYLVWRPGTTQIFRSRDLTIFNEL 240
+ TP+ G+ L HL+V G+TAFVH+ET K+KL R W G +G+S DS AY V+ P T +I SR++T +
Sbjct: 194 LNNETPYYRMFGKQASLRHLRVIGSTAFVHLETYKSKLANRAWPGILIGYSPDSRAYRVFNPRTKRIVHSRNVTFIEPM 272
BLAST of mRNA_D-mesarthrocarpus_Contig10944.1.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE) HSP 1 Score: 68.6 bits (166), Expect = 3.630e-11 Identity = 33/79 (41.77%), Postives = 48/79 (60.76%), Query Frame = 1
Query: 4 VRRRTPFEVWTGRIPKLHHLKVSGATAFVHVETRKTKLLQRGWEGRFVGHSIDSPAYLVWRPGTTQIFRSRDLTIFNEL 240
+ TP+ G+ L HL+V G++AFVHVET K+KL R W G VG+S +S AY ++ P T +I SR++T +
Sbjct: 676 LNNETPYYRMFGKQASLRHLRVIGSSAFVHVETYKSKLANRAWPGILVGYSPNSNAYRIYNPHTKRIVPSRNVTFIEPM 754
BLAST of mRNA_D-mesarthrocarpus_Contig10944.1.1 vs. uniprot
Match: A0A6H5FUQ5_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5FUQ5_9HEMI) HSP 1 Score: 65.5 bits (158), Expect = 4.250e-10 Identity = 33/100 (33.00%), Postives = 57/100 (57.00%), Query Frame = 1
Query: 13 RTPFEVWTGRIPKLHHLKVSGATAFVHV-ETRKTKLLQRGWEGRFVGHSIDSPAYLVWRPGTTQIFRSRDLTIFNELTFQPQDQIQASTNGPPPVEIGHL 309
+TP+E+W G P++HHL++ G T + H+ + ++TK ++ +G +G+ D Y +W Q+ RSRD+ IFNE +D A+T P P ++
Sbjct: 153 KTPYEIWYGTKPRVHHLRIIGTTCYAHIPKPQRTKFQKKARKGILIGYDGDE-GYRIWCQKNLQLIRSRDV-IFNEEPLTTEDI--ATTRRPDPQQLNEF 248
BLAST of mRNA_D-mesarthrocarpus_Contig10944.1.1 vs. uniprot
Match: A0A6H5GIQ8_9HEMI (Uncharacterized protein (Fragment) n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GIQ8_9HEMI) HSP 1 Score: 65.5 bits (158), Expect = 4.380e-10 Identity = 33/100 (33.00%), Postives = 57/100 (57.00%), Query Frame = 1
Query: 13 RTPFEVWTGRIPKLHHLKVSGATAFVHV-ETRKTKLLQRGWEGRFVGHSIDSPAYLVWRPGTTQIFRSRDLTIFNELTFQPQDQIQASTNGPPPVEIGHL 309
+TP+E+W G P++HHL++ G T + H+ + ++TK ++ +G +G+ D Y +W Q+ RSRD+ IFNE +D A+T P P ++
Sbjct: 654 KTPYEIWYGTKPRVHHLRIIGTTCYAHIPKPQRTKFQKKARKGILIGYDGDE-GYRIWCQKNLQLIRSRDV-IFNEEPLTTEDI--ATTRRPDPQQLNEF 749
BLAST of mRNA_D-mesarthrocarpus_Contig10944.1.1 vs. uniprot
Match: A0A6H5FV69_9HEMI (Uncharacterized protein n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5FV69_9HEMI) HSP 1 Score: 63.9 bits (154), Expect = 1.510e-9 Identity = 29/70 (41.43%), Postives = 47/70 (67.14%), Query Frame = 1
Query: 16 TPFEVWTGRIPKLHHLKVSGATAFVHVET-RKTKLLQRGWEGRFVGHSIDSPAYLVWRPGTTQIFRSRDL 222
TP E+W+G+ PKL H+++ G AF HV + R+ KL +R F+G+S++S AY ++ P ++F SRD+
Sbjct: 190 TPEEIWSGKKPKLSHIRIFGCKAFAHVPSDRRRKLDKRATVCIFLGYSLESKAYRLYNPANRRVFLSRDV 259
BLAST of mRNA_D-mesarthrocarpus_Contig10944.1.1 vs. uniprot
Match: E2B0C9_CAMFO (Copia protein (Fragment) n=1 Tax=Camponotus floridanus TaxID=104421 RepID=E2B0C9_CAMFO) HSP 1 Score: 58.2 bits (139), Expect = 7.590e-9 Identity = 26/58 (44.83%), Postives = 37/58 (63.79%), Query Frame = 1
Query: 13 RTPFEVWTGRIPKLHHLKVSGATAFV-HVETRKTKLLQRGWEGRFVGHSIDSPAYLVW 183
+TPFE+WT R+P L HL++ G A++ + + RK K R G F+G+S S AY VW
Sbjct: 34 KTPFEIWTNRVPSLKHLRIFGMKAYILNKDPRKKKFDSRSKTGIFIGYSDKSKAYRVW 91
BLAST of mRNA_D-mesarthrocarpus_Contig10944.1.1 vs. uniprot
Match: A0A6H5KFB1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFB1_9PHAE) HSP 1 Score: 61.6 bits (148), Expect = 8.540e-9 Identity = 33/87 (37.93%), Postives = 48/87 (55.17%), Query Frame = 1
Query: 4 VRRRTPFEVWTGRIPKLHHLK--------VSGATAFVHVETRKTKLLQRGWEGRFVGHSIDSPAYLVWRPGTTQIFRSRDLTIFNEL 240
+ TP+ G+ L HL+ V G+TA VH+ET K+KL+ R W G +G+S DS AY V+ P T +I SR++T +
Sbjct: 181 LNNETPYYRMFGKQASLRHLRXXXXXXXRVIGSTASVHLETYKSKLVNRAWPGILIGYSPDSRAYRVFNPHTKRIVHSRNVTFIEPM 267
BLAST of mRNA_D-mesarthrocarpus_Contig10944.1.1 vs. uniprot
Match: A0A8J6HVS3_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HVS3_TENMO) HSP 1 Score: 59.7 bits (143), Expect = 4.560e-8 Identity = 32/90 (35.56%), Postives = 49/90 (54.44%), Query Frame = 1
Query: 13 RTPFEVWTGRIPKLHHLKVSGATAF-VHVETRKTKLLQRGWEGRFVGHSIDSPAYLVWRPGTTQIFRSRDLTIFNELTFQPQDQIQASTN 279
RTP+EVWT ++P + H +V GA F + E + K RG EG F+G++ S AY VW ++ SRD+ E+ + ++ S N
Sbjct: 512 RTPYEVWTDKVPDISHFRVFGARVFYLDREPGRGKFDSRGQEGIFLGYADHSKAYRVWSTKGRKVVISRDVKFVEEV--RAHSDVKTSDN 599
BLAST of mRNA_D-mesarthrocarpus_Contig10944.1.1 vs. uniprot
Match: A0A7I8K9S9_SPIIN (Hypothetical protein n=7 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K9S9_SPIIN) HSP 1 Score: 58.2 bits (139), Expect = 1.560e-7 Identity = 32/75 (42.67%), Postives = 46/75 (61.33%), Query Frame = 1
Query: 16 TPFEVWTGRIPKLHHLKVSGATAFVHVETRKTKLLQ-RGWEGRFVGHSIDSPAYLVWRPGTTQIFRSRDLTIFNE 237
TPFEVW G+ P +HHLKV G A+V T K L+ RG + F+G+ S AY + P T ++ +RD+ +F+E
Sbjct: 700 TPFEVWHGKKPAVHHLKVFGCIAYVLNTTPHLKKLEDRGRKMIFIGYEYGSKAYQAYDPTTRRVHVTRDV-VFDE 773
BLAST of mRNA_D-mesarthrocarpus_Contig10944.1.1 vs. uniprot
Match: A0A7I8JRH0_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8JRH0_SPIIN) HSP 1 Score: 56.2 bits (134), Expect = 2.910e-7 Identity = 31/75 (41.33%), Postives = 45/75 (60.00%), Query Frame = 1
Query: 16 TPFEVWTGRIPKLHHLKVSGATAFVHVETRKTKLLQ-RGWEGRFVGHSIDSPAYLVWRPGTTQIFRSRDLTIFNE 237
TPFEVW G+ P +HHLKV G A+V T K L+ RG + F+G+ S AY + P ++ +RD+ +F+E
Sbjct: 2 TPFEVWHGKKPAVHHLKVFGCIAYVLNTTPHLKKLEDRGRKMIFIGYEYGSKAYRAYDPTARRVHVTRDV-VFDE 75 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10944.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10944.1.1 >prot_D-mesarthrocarpus_Contig10944.1.1 ID=prot_D-mesarthrocarpus_Contig10944.1.1|Name=mRNA_D-mesarthrocarpus_Contig10944.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=111bp LVRRRTPFEVWTGRIPKLHHLKVSGATAFVHVETRKTKLLQRGWEGRFVGback to top mRNA from alignment at D-mesarthrocarpus_Contig10944:499..831- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10944.1.1 ID=mRNA_D-mesarthrocarpus_Contig10944.1.1|Name=mRNA_D-mesarthrocarpus_Contig10944.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=333bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10944:499..831- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10944:499..831- >mRNA_D-mesarthrocarpus_Contig10944.1.1 ID=mRNA_D-mesarthrocarpus_Contig10944.1.1|Name=mRNA_D-mesarthrocarpus_Contig10944.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=333bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10944:499..831- (Discosporangium mesarthrocarpum MT17_79)back to top |